Xanthomonas indica: Q7W82_02475
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Entry
Q7W82_02475 CDS
T10539
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
xin Xanthomonas indica
Pathway
xin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Q7W82_02475 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xin03400
]
Q7W82_02475 (recB)
Enzymes [BR:
xin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Q7W82_02475 (recB)
DNA repair and recombination proteins [BR:
xin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Q7W82_02475 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XCI81046
UniProt:
A0AAU8I7F1
LinkDB
All DBs
Position
complement(578138..581989)
Genome browser
AA seq
1283 aa
AA seq
DB search
MSAAPDRDPYLQLPLHGVRLIEASAGTGKTFTLATLFTRLVVERGLRLGQLLAVTFTEAA
TQELRRRIRERLALAATLVPDADGSLVGAALVPFSGSAATDHATDPSRPTPQHDPPDVVL
TRDILTAHLATGSETPTALRRRLQQAAEDIDLAAIFTIHGFCARVLREHALESGQAFAAP
QLLTDDRELLHDVAADLWRQRAADPAMAEDLVALWPGGPDGMAIDLRELVRHPTLLPAAP
VFAAEDGDVLQQAAQRAGVALAEAFRTHGTACFEAIAAAMEAGVLSKVSYKPDWLTALWH
WLDAFAAAPAADAPPHPKLVKLTATELAAGTNKKHAERTPASPLSHAIDGYLAALAQLAQ
WRTQRRICLLHALRADAAERLAYLKRQRRVQTYDDLVEGVARALEGPHGAALAQRLRAQY
AVALVDEFQDTDDRQWTIFRKVFAPETAGSSAAQDDTAIASLLAPDDTPPLLALIGDPKQ
AIYGFRGGDVRTYLAAAADAERAPPLAHNFRSRPALLAAIDALYAQAGYAEAFLTDGIAF
HPVQPGSKRVDADLQRNGTPAPALTVWRAPEPPPPPATAKAPGKPKPWSAGRARELCTAA
CVAAIRGWLADARDGNATLLGRPVQAGDIAVLVRSHGEATRIQQALAAAGIPAVAAGRRS
LFATDEALELLALLQALLDPGDDGRLRAALATVLIGEDAAAIAALDHDGERHRRWQQQAL
DWRERWQRGGPLALIGDLGAAHGQRLLALVDGERRLTNYLQLAELLQEADTRALGPHGLV
DWLARRIANADDSDEAQQLRLESDARRVQIVTLHKSKGLEYPLVFLPYAGIGRSERSPGR
HCVVPAPQGGRQLQWNTGRSGGASDPAWETAEAAWKQEQRAEDARLLYVGLTRAEHALWI
ATGAFPQHERTALAPMLRDLDALQAAAAPGAIALDSTPPPAQLPRLPPEPAPPVPPARVP
QRRVLPEWWVYSFTQLANADAGSDPMASATVPSSGGSDEPAASEPVSAAVEVDMVDRRFV
GNRFGVAMHDVFERCDFAAWRDWRPGQPAPAGQVTAIVEALQRGGYAEDELEDGTAMLTA
LVGHTLTVALPEGTCLAAVPEEQRRNEMEFHFAMRPTRVDALLALLHRFGVAGERQAFGA
RQRLEGLMTGLIDLTYHHDGRWYVLDYKSNRLPAYGPDALARAMAHSEYTLQALIYTVAL
HRWLRFRLGEGYDYARDFGGVRYLFCRGLDAARDPSPGVHAWRFDPHLIEGVDALFAGAP
AEPLSPRERGWGEGASAHGAPTP
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgcgcccgaccgcgacccctacctgcagttgccgctgcacggcgtgcgcctg
atcgaggccagcgccggcaccggcaagaccttcaccctggccaccctgttcacccgcctg
gtggtcgaacgcggcctgcgcctgggccaactcctcgccgtcaccttcaccgaggccgcc
acccaggaactgcgccggcgcatccgcgagcgcctggcgctggcggcgacgctggtgccg
gacgccgatggaagcctcgtaggagcggctcttgtccccttttcgggatcagccgcgacc
gaccacgcgaccgacccatcgcgcccaaccccgcaacacgacccacccgacgtcgtcctc
acccgcgacatcctcaccgcgcacctggccaccggcagcgaaacccccaccgccctgcgc
cgccgcctgcagcaggccgccgaggacatcgacctcgccgccatcttcaccatccacggc
ttctgcgcgcgcgtactgcgcgagcatgcgctggaaagcggccaggccttcgccgcgccg
caactgctcaccgacgaccgcgaactgctgcacgacgtcgctgccgacctgtggcggcaa
cgcgccgccgatccggcgatggccgaggacctggtggcgctgtggccgggcgggccggac
ggcatggccatcgatctgcgcgaactggtgcggcatccgaccctgctgccggccgcgccg
gtcttcgccgccgaagacggcgacgtgctgcaacaggccgcgcagcgtgccggcgtggcg
ctggccgaagcgttccgcacccacggcaccgcctgtttcgaggcgatcgccgcggcgatg
gaggccggcgtgctgagcaaggtcagctacaagcccgactggctgaccgcgctgtggcac
tggctggacgccttcgccgcggcgccggcggcggacgcgccgccgcacccgaagctggtc
aagctcaccgccactgaactggccgccggcaccaacaagaagcacgccgagcgcaccccg
gcctcgccgctgagccacgccatcgacggctacctggccgcattggcgcaactggcgcag
tggcgcacgcaacgccgcatctgcctattgcacgcgctgcgcgccgacgcggcggagcgg
ctggcctatctcaagcgccagcgccgcgtgcagacctacgacgacctggtcgagggcgtg
gcgcgcgcgctggaaggcccgcacggcgccgctctggcgcagcggctgcgcgcgcagtac
gcggtggccctggtggacgaattccaggacaccgacgatcgccagtggacgatcttccgc
aaggtgttcgctccagagacggcaggctcctctgcggcgcaagacgatacggcgatcgca
tcgctgctagcacccgacgacacgccgccgctgctcgccctgatcggcgaccccaagcag
gccatctacggcttccgcggcggcgacgtgcgcacctacctggcggccgccgcggacgcc
gaacgcgcgccgccgctggcgcacaacttccgctcgcgccccgcgctgctggcggcgatc
gacgcgctgtacgcgcaagccggctacgccgaggccttcctcaccgacggcatcgccttc
cacccggtgcagccgggcagcaagcgcgtcgatgccgacctgcagcgcaacggcacaccg
gccccggcgctgaccgtgtggcgcgcgccggaaccgccaccgccgccggccaccgccaag
gcacccggaaaacccaagccctggagcgccggccgcgcccgcgagctgtgcaccgccgcc
tgcgtcgcggcgatccgcggctggctggccgatgcgcgcgacggcaacgccacgttgctc
ggccgccctgtgcaggccggcgacatcgccgtgctggtgcgcagccacggcgaggccacg
cgcatccagcaggcgctggccgccgccggcatccccgcagtcgccgccggccgccgcagc
ctgttcgccaccgacgaggcgctggaactgctggcgctgctgcaggcgctgctcgacccc
ggcgacgacggccgcctgcgcgccgcactggccactgtgctgatcggcgaggacgccgcg
gccatcgccgcactcgaccacgacggcgagcgtcatcgccgctggcagcaacaggcgctg
gactggcgcgagcgctggcagcgcggcggcccgctggcgctgatcggcgacctcggcgcc
gcgcacgggcagcgcctgctggcgctggtcgacggcgagcgccgcctcaccaactacctg
cagctggccgaactgctgcaggaagccgacacccgcgcgctcggcccgcacggcctggtc
gactggctggcgcggcgcatcgccaatgccgacgacagcgacgaagcgcagcagctgcgg
ctggagtcggatgcgcgccgcgtgcagatcgtcaccctgcacaagagcaagggcctggag
tatccgctggtgttcctgccgtacgccggcatcggtcgcagcgagcgcagccccgggcgg
cactgcgtggtgccggcacctcagggcgggcgccagttgcaatggaacaccggccgcagc
ggcggcgcatccgatccggcctgggagacggccgaagccgcgtggaaacaggaacagcgc
gccgaggacgcgcgcctgctctacgtcggcctgacccgcgccgaacatgcgctgtggatc
gccaccggcgccttcccgcagcacgagcgcaccgcgctggcgccgatgctgcgcgatctc
gacgccctgcaggccgccgccgcgcccggcgccatcgccctcgacagcaccccgccgccg
gcgcagttgccgcggctgccccccgagccggcgccgccggtaccgccagcgcgcgtgccg
cagcggcgggtgctgccggagtggtgggtgtacagcttcacccaactggccaatgccgat
gccggcagcgacccgatggccagcgccacggtgcccagcagcggcggcagcgacgaaccc
gccgccagcgagccggtcagcgccgcggtggaggtggacatggtcgaccgccgcttcgtc
ggcaaccgtttcggcgtggccatgcacgacgtattcgagcgctgcgacttcgccgcctgg
cgcgactggcggccgggccagccggcgccggccgggcaggtcaccgccatcgtcgaagcg
ctgcagcgcggcggctacgccgaggacgaactggaagacggcaccgccatgctcaccgcc
ctggtcggccataccctcaccgtggcgctgccggaaggcacctgcctggccgcggtgccg
gaggagcagcggcgcaacgaaatggaatttcacttcgcgatgcgcccgacccgcgtcgac
gcactgctggcgctgctgcaccgcttcggcgtggccggcgagcgccaggcgttcggcgcg
cggcagcgcctggaggggctgatgaccggcctgatcgacctcacctaccaccacgacggc
cgctggtacgtgctcgactacaagtccaaccgcctgccggcctacggccccgacgccttg
gcgcgggcgatggcgcacagcgagtacaccctgcaggcgctgatctacaccgtggccctg
caccgctggctgcgctttcgcctgggcgagggctacgactacgcccgcgacttcggcggc
gtgcgctacctgttctgccgcggcctcgacgccgcccgcgacccatcgccgggcgtgcac
gcctggcgcttcgacccgcacctgatcgaaggcgtcgacgccctcttcgccggcgccccg
gctgagcccctctcccctcgggagaggggttggggtgagggtgcgtccgcccacggagcc
cccaccccgtga
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