Xanthomonas indica: Q7W82_09095
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Entry
Q7W82_09095 CDS
T10539
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
xin Xanthomonas indica
Brite
KEGG Orthology (KO) [BR:
xin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xin03009
]
Q7W82_09095 (rlmD)
Enzymes [BR:
xin01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Q7W82_09095 (rlmD)
Ribosome biogenesis [BR:
xin03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Q7W82_09095 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
MTS
RrnaAD
Methyltr_RsmB-F
Cons_hypoth95
Methyltransf_11
TRM5-TYW2_MTfase
UPF0020
TRAM
Methyltransf_12
Methyltransf_15
Methyltransf_23
CMAS
PrmA
Methyltransf_32
Ubie_methyltran
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
XCI82279
UniProt:
A0AAU8IAC7
LinkDB
All DBs
Position
2086489..2087835
Genome browser
AA seq
448 aa
AA seq
DB search
MARSRNRLDRTPFQTDIADLSHDGRGVARREGDKVAFVAGALPGETVLAEPTARNRHFDE
ARTVQVLQASPQRVTPRCPHFGVCAGCVLQHLAEDQQIVAKQRVLTENLERIGHVTPQAV
LPALTGAPWGYRRKGRFSVRRVEKKDKTLVGFREQDPRFVADLSVCHTVIPQIGFKVSAL
AELVESLDGKRDIPQIEFIAGDAAVALTFRHMQPLSARDQDALIAFAQEHDFAIFLQPGG
VDSVHPLYPQEVPLSFRLPQWDVELAFRPLDFIQVNAALNEKMIAHALALLDAQPGDRVL
DLFCGLGNFTLPLARTVREVVGVEGDAGLVARARENAQRNGLDNAQFFAADLTQDQRQAP
WMRQGFDKLLLDPPRSGALEVLQQLPLKQFQRIVYVSCHPGSLARDAGYLVNDQGFVLKA
AGAMDMFPHTAHVESIAVFEKPGMGNRE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgatccagaaaccgtctcgaccgcacgcccttccagaccgacatcgccgacctc
agccacgatggccgcggcgtggcccgccgcgagggcgacaaggtcgccttcgtcgccggc
gcgctgcccggcgagaccgtcctggccgaacccaccgcgcgcaaccgccacttcgacgag
gcgcgcaccgtgcaggtgctgcaggcctcgccgcagcgggtgacgccgcgctgcccgcat
ttcggggtctgcgccggctgcgtcctgcaacacctggccgaggaccagcagatcgtcgcc
aagcagcgggtgctgaccgagaacctggagcgcatcggccacgtgaccccgcaggcggtg
ctgccggcgctgaccggcgcgccctggggctaccggcgcaagggccgtttctcggtgcgg
cgggtggagaagaaggacaagaccctggtcggcttccgcgagcaggacccgcgcttcgtc
gccgacctgtcggtctgccatacggtgatcccgcagatcggcttcaaggtgagcgcgctg
gcggagctggtcgaaagcctggacggcaagcgcgacatcccgcagatcgagttcatcgcc
ggcgacgccgcggtggcgctgaccttccggcacatgcagccgctgagcgcgcgcgaccag
gacgcgctgatcgccttcgcccaggaacacgatttcgccatcttcctgcagcccggtggc
gtggacagcgtgcacccgctgtatccgcaggaggtgccgctgtcgttccggctgccgcag
tgggacgtggaactggcgttccggccgctggacttcatccaggtcaatgccgcgctcaac
gagaagatgatcgcgcacgcgctggcgctgctcgacgcgcagcctggcgaccgggtgctg
gacctgttctgcggcctgggcaacttcaccctgccgctggcgcgcaccgtgcgcgaggtg
gtcggcgtggaaggcgacgccgggctggtggcacgcgcgcgggaaaacgcgcagcgcaac
ggcctggacaacgcccagttcttcgccgccgacctgacccaggaccagcgccaggcgccg
tggatgcgccagggcttcgacaagctgctgctggacccgccgcgctccggcgcgctggaa
gtgctgcagcaactgccgctgaagcagttccagcgcatcgtctacgtcagctgccatccc
ggctcgctggcgcgcgacgccggctacctggtcaacgaccagggtttcgtgctcaaggcc
gccggcgcgatggacatgttcccgcataccgcgcatgtggagagcattgcggtgtttgag
aagccgggaatggggaatcgggagtag
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