Xanthomonas indica: Q7W82_10030
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Entry
Q7W82_10030 CDS
T10539
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xin Xanthomonas indica
Pathway
xin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q7W82_10030 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xin03019
]
Q7W82_10030 (pnp)
03016 Transfer RNA biogenesis [BR:
xin03016
]
Q7W82_10030 (pnp)
Enzymes [BR:
xin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Q7W82_10030 (pnp)
Messenger RNA biogenesis [BR:
xin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Q7W82_10030 (pnp)
Transfer RNA biogenesis [BR:
xin03016
]
Prokaryotic type
tRNA degradation factors
Q7W82_10030 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
KH_PNO1_2nd
DUF7680
S1_2
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
XCI82457
UniProt:
A0AAU8IBH9
LinkDB
All DBs
Position
2301065..2303173
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AA seq
702 aa
AA seq
DB search
MAKITKTFQYGKHTVTLETGEIARQAGGAVIVKMDDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSMN
PDIDGDIAALIGASAALSLAGTPFKGPIGAAKVGYKNGEYILNPTVSDLKESQLELVVAG
TANAVLMVESEAALLSEEVMLGAVTFGHREMQKVINAINELTVEAGTKPSEWVAPAKNEA
MIAALKEAVGDQLAAAFQVRDKLQRRDAIAAIKKDVLAQLAPRATAENWVAADLAKEFGE
LEYQTMRGSVLSTKVRIDGRALDTVRPISVKAGVLPRTHGSALFTRGETQAIVVTTLGTA
RDGQVIDAVSGEYKENFLFHYNFPPYSVGECGRFGAPKRREIGHGRLAKRGVLAVMPTME
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPVKAPVAGIAMGLVKEGNDFVVLS
DILGDEDHLGDMDFKVAGTAEGVSALQMDIKIEGITEEIMKQALAQAKAGRLHILGEMAS
ALTSPRAELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAIAAQAAKSRIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSERV
EKVGDKLKEGDVVKVKVLEVDKQGRIRLSMKAVEEGEGVSAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaaaaccttccagtacggcaagcacaccgtcaccctcgaaaccggc
gagatcgcccgccaggccggcggtgccgtcatcgtcaagatggacgacaccgtactgctg
gtcaccgccgtcgccgccaagagcgcgcgcgaaggtcaggacttcttcccgctgacggtc
gactatcaggagaagttctacgccggcggccgcatccccggtggcttcttcaagcgcgag
ggccgtgcgaccgagaaggagacgctgatttcgcgtctgatcgaccgtccgatccgtccg
ctgttcccggaggattacaagaacgaagtgcagatcatcgccacggtgatgtcgatgaac
ccggacatcgacggcgacatcgccgcgctgatcggcgcctcggccgcgctgtcgctggcc
ggcaccccgttcaagggcccgatcggcgccgccaaggtcggctacaagaacggcgagtac
atcctcaacccgaccgtgtcggacctgaaggaatcgcagctggagctggtcgtcgccggt
accgccaacgccgtgctgatggtcgagtccgaagccgcactgctgtccgaagaagtgatg
ctgggcgcggtcaccttcggccaccgcgagatgcagaaggtcatcaacgcgatcaacgag
ctgaccgtcgaagccggcaccaagccgtccgagtgggtcgccccggccaagaacgaggcc
atgatcgccgcgctgaaggaagccgtcggcgatcagctggccgccgccttccaggtgcgc
gacaagctgcagcgccgcgatgccatcgccgcgatcaagaaggacgtgctggcgcagctg
gcgccgcgcgccaccgccgagaactgggtcgctgccgacctggccaaggagttcggcgag
ctggaataccagaccatgcgcggttcggtgctgagcaccaaggtgcgcatcgacggccgt
gcgctggacaccgtgcgcccgatcagcgtgaaggccggcgtgctgccgcgcacccacggc
tcggcgctgttcacccgcggcgagacccaggcgatcgtggtgaccacgctgggcaccgcc
cgcgacggccaggtgatcgacgcggtctccggcgagtacaaggaaaacttcctgttccac
tacaacttccccccctactcggtgggcgagtgcggccgcttcggcgcgcccaagcgtcgc
gagatcggccacggccgcctcgccaagcgcggcgtgctggcggtgatgccgaccatggaa
gagttcccgtacaccatccgcgtggtgtcggaaatcaccgaatccaacggttcctcgtcg
atggcctcggtgtgcggcagctcgctggcgctgatggacgccggcgtgccggtgaaggcg
ccggtggccggtatcgccatgggcctggtgaaggaaggcaatgacttcgtggtgctgtcg
gacatcctgggcgatgaagatcacctgggcgacatggacttcaaggtcgccggtaccgcc
gagggcgtgtccgcgctgcagatggacatcaagatcgaaggcatcaccgaggaaatcatg
aagcaggccctggcccaggccaaggccggccgcctgcacatcctcggcgagatggccagc
gcgctgaccagcccgcgtgcggagctgagcgactacgcgccgcgcctgctgaccatcaag
atccacccggacaagatccgcgaagtgatcggcaagggcggttcgaccatccaggcgatc
accaaggaaaccggcacccagatcgacatccaggacgacggcaccatcgtcatcgcctcg
gtcaacgcgatcgcggcgcaggccgccaagtcgcgcatcgagcagatcacctcggacgtc
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggcgcgttcgtg
accatcctgccgggcaaggacggcctggtgcacgtctcgcagatctccagcgagcgcgtg
gagaaggtcggcgacaagctgaaggaaggcgacgtggtcaaggtcaaggtgctggaagtc
gacaagcagggccgtatccgcctgtcgatgaaggccgtcgaggaaggcgagggcgtgtcg
gccgaataa
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