Xanthomonas indica: Q7W82_12535
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Entry
Q7W82_12535 CDS
T10539
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xin Xanthomonas indica
Pathway
xin03410
Base excision repair
xin03430
Mismatch repair
xin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q7W82_12535 (recJ)
03430 Mismatch repair
Q7W82_12535 (recJ)
03440 Homologous recombination
Q7W82_12535 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xin03400
]
Q7W82_12535 (recJ)
DNA repair and recombination proteins [BR:
xin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Q7W82_12535 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Q7W82_12535 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Q7W82_12535 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
XCI79116
UniProt:
A0AAU8I1N7
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All DBs
Position
2886042..2887775
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AA seq
577 aa
AA seq
DB search
MNAIARIVRRPAAAAAGPWHEATLPLLRRIYAARGAHDSGLAQPKLAQLLPPDALSGIDA
AVALLAEAIAARKRILVVGDFDCDGATACAVAVRGLRLLGAAQVLHAVPNRMVHGYGLSP
ALVAELAPLQPDLLVTVDHGIACHAGVAAAKALGWQVLVTDHHLPGPALPPADAIVDPNL
AGDAFPSKMLAGVGVIFYVLLALRRHLRAHGAFAAAPPDLGVLLDLVAVGTVADLVPLDP
NNRALVSAGLRRLQRGEGCIGLRALIEASGRDPARLSASDIGFALAPRLNAAGRLEDMAL
GIELLLCEDPQQARAIAATLEEINAERRAVQQQMTDEAEAVVAKALLAAPEQPPVAVCLF
DAQWHPGVIGLVASKMKDRLHRPVIAFAPAEPGSTQLRGSARSIPGFHIRDAMAAVEAQR
PGLMEKFGGHAMAAGLSLPQDALAEFEQVFRAHALASLDAELLQAELLSDGALDPHELDH
RHAEALRQGGPWGQGFPEPLFDGEFEVLQWRVLKERHLKLSLRCPGRAEPLNAIHFNGWH
GREPGRRVHIAYRLVADDYRGGSAVQLVVEHCQPLGG
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccatcgcgcgcatcgtgcggcggcccgcggcggccgcggccggcccgtggcac
gaggccaccttgccgctgttgcggcgcatctatgccgcgcgcggcgcccacgacagcggc
ctggcgcagcccaagctggcgcaactgctgccgcccgatgcgctgagcggcatcgacgcc
gcggtcgcgttgctggccgaggcgatcgcggcgcgcaagcgcatcctggtggtcggcgat
ttcgattgcgacggcgccacggcctgcgcggtggcggtgcgcgggctgcgcctgctcggc
gctgcgcaggtgctgcacgcggtgcccaaccgcatggtccatggctacggcctgtcgccg
gcgctggtggcggaactggcgccgttgcagccggacctgctggtcacggtggaccacggc
atcgcctgccatgccggcgtcgccgcggccaaggcgctgggctggcaggtgctggtcacc
gaccaccatctgccggggccggccttgccgccggccgatgccatcgtcgatccgaacctg
gccggcgacgcgttcccgagcaagatgctggccggcgtcggcgtgatcttctacgtgctg
ctggcgttgcgccggcacctgcgcgcacacggtgcgttcgcggcggcgccgccggaccta
ggcgtgctgctggacctggtcgcggtcggcaccgtcgccgacctggtgccgctggatccg
aacaatcgggcgctggtgtcggccggtctgcgccggctacagcgtggcgagggctgcatc
ggcctgcgcgccttgatcgaagccagtggtcgcgatccggcacggctcagcgccagcgac
atcggcttcgcgctggcgccgcggctcaacgccgccggccgccttgaggacatggccctg
ggcatcgagttgttgctgtgcgaggacccgcagcaggcgcgtgcgatcgccgcgacgctg
gaagagatcaacgccgagcgccgcgccgtgcagcagcagatgaccgacgaggccgaagcg
gtggtggccaaggcgctgctggccgcgcccgagcagccgccggtggcggtgtgcctgttc
gatgcgcagtggcatcccggcgtgatcggcctggtcgcgtcgaagatgaaggatcgcctg
caccggccggtgatcgccttcgccccggccgagccgggcagcacccagttgcgcggctcg
gcgcgttcgattcccgggtttcacatccgcgatgcgatggcggcggtggaggcgcagcgg
ccggggctgatggagaagttcggcggccatgccatggccgcgggcctgagcctgccgcag
gacgcactggccgagttcgaacaggtgttccgcgcgcacgcgctggcgagtctggacgcg
gaactgctgcaggccgaactgctcagcgacggtgcgctggacccgcacgaactcgaccat
cgccatgccgaggcgttgcgtcagggtgggccatgggggcagggctttcccgagccgctg
ttcgacggcgaattcgaggtgctgcagtggcgcgtgctgaaggagcgccacctcaagctg
agcctgcgctgccccggccgcgccgagcccctgaacgccatccacttcaacggctggcac
ggtcgcgaaccgggccgtcgcgtgcatatcgcctatcgccttgtcgcggatgactaccgc
ggcggcagtgcggtgcagttggtggtggagcactgccagccgctggggggctga
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