Xanthomonas indica: Q7W82_12950
Help
Entry
Q7W82_12950 CDS
T10539
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
xin Xanthomonas indica
Pathway
xin02020
Two-component system
xin02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xin00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Q7W82_12950 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Q7W82_12950 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xin03021
]
Q7W82_12950 (rpoN)
Transcription machinery [BR:
xin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Q7W82_12950 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_31
HTH_IclR
Sigma70_r4
Phage_CII
HTH_23
DUF5429
HTH_26
Motif
Other DBs
NCBI-ProteinID:
XCI79192
UniProt:
A0AAU8I1U8
LinkDB
All DBs
Position
complement(2998051..2999454)
Genome browser
AA seq
467 aa
AA seq
DB search
MKPTVSAQLGQQLHLTPQLLQSIRLLQLDGMQLELEIRRALETNPLLELEEPEGVIEPVV
KHEDAALETAAFDELPESSMWDIPAAGWNDGEDDRMQRIAAGESTDPHLRVLQRLALELP
ALELEAAAFWLEHCDDAGYLDGPLDTLQQLASARLGLPLAQAEAVRQRLLHGDPAGLAAC
DLRECLQAQLSDLPGRVPGRHLAARILAGDLNLLASHDYALLGRQLDAETDDVREAVRLI
LSLQPRPGDSLQPQDAGHVLPDVVAWHADGTWRVALNPATTHRVTVNPMHERALAEAGDA
AQPLREMLQEARWLTRGLSMRYETLLRTTRAIVERQSAFLVKGEEAMAPLTLKEVAEAIG
MHESTISRITTGKYLQTPRGTFELKHFFAVRLEGAAVSGQAVRAMVRRLIESEPAGRPLA
DEAIAGLLSRQGVNVARRTVAKYREQLDIAPARERRRGSKPLLARVG
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaccgtttccgcccaactgggccagcaactgcatctgaccccgcaactgctg
cagtcgatccggctgctgcaactcgacggcatgcaactggaactggaaatccgccgcgcg
ctggaaaccaatccgctgctcgaactggaagagcccgagggcgtgatcgagccggtggtc
aagcacgaggatgcggcgctggaaaccgcggcgttcgacgaactgcccgaatcctcgatg
tgggacatcccggccgccggctggaacgacggcgaagacgatcgcatgcagcgcatcgcc
gccggcgaatccaccgacccgcacctgcgcgtgctgcagcggctggccctggaactgccg
gcgctggaactggaagcggctgcgttctggctggaacactgcgacgatgccggctacctg
gacggcccgctcgacaccttgcagcagttggccagcgcacgcctgggcctgccgctggcg
caggccgaagcggtgcgccagcgcctgctgcacggcgacccggccggcctggccgcctgc
gacctgcgcgaatgcctgcaggcgcagttgagcgacctgcccggccgcgtgccgggccgc
cacctggccgcgcgcatcctcgccggcgatctcaatctgctcgccagccacgattacgcg
ctgctcgggcgccagctcgatgccgagaccgacgacgtgcgcgaggcggtgcggctgatc
ctgtcgctgcagccgcggcccggcgacagcctgcagccgcaggacgccggccatgtgctg
ccggacgtggtcgcctggcatgccgacggcacctggcgggtggcgctgaacccggccacc
acccaccgcgtcaccgtcaacccgatgcacgagcgcgccctggccgaggccggcgacgcc
gcgcagccgctgcgcgagatgctgcaggaagcgcgctggctgacccgcggcctgtcaatg
cgctacgagaccctgttgcgcaccacccgcgccatcgtcgagcgccagtcggcgttcctg
gtcaagggcgaggaagcgatggcgccgctgaccctgaaagaggtggccgaggcgatcggc
atgcacgagtcgaccatctcgcgcatcaccaccggcaagtacctgcagaccccgcgcggc
acgttcgagctgaagcacttcttcgccgtgcgcctggaaggcgccgcggtgtccgggcag
gcggtgcgggccatggtccggcgcctgatcgaatccgagccggccgggcggccgctggcc
gacgaggccatcgccggactgctgtcgcgacagggcgtgaacgtggcaaggcgcacagtc
gccaagtatcgtgaacaattggacatcgctcccgcacgcgaacgccgccgcggcagcaaa
ccgctgctggcccgtgtgggctaa
DBGET
integrated database retrieval system
