Xanthomonas indica: Q7W82_16690
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Entry
Q7W82_16690 CDS
T10539
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xin Xanthomonas indica
Pathway
xin00040
Pentose and glucuronate interconversions
xin01100
Metabolic pathways
xin01120
Microbial metabolism in diverse environments
xin02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Q7W82_16690
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Q7W82_16690
Enzymes [BR:
xin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Q7W82_16690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
XCI79893
LinkDB
All DBs
Position
complement(3843240..3844304)
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AA seq
354 aa
AA seq
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MQQQFRTGALALALAVGAAPAFAGPVGYGANTTGGGNAIPVNVATMEAMQAAIDNYAGSG
GLVLNYTGSFNFASITDVCTQWKLPAKTVQIKNKRDITIKGANGSSANFGVRVVGNAHNV
IIRNMTLGLLPGGEDADSISLEGNSSGQPSNIWVDHNTIFASLTKCPGAGDASFDGGIDM
KKGVNHVTVSYNYIHDYQKVALNGYSDSDTQNAAARTTYHHNRFENVESRLPLQRRGLSH
IYNNYFNNVFTSGINVRMGGVALIEANYFENIKNPVTSRDSSEIGYWDLINNYVGGGITW
TVPESTSKPYANATTWISSKTYPEPLGYLYTAIPAAQVKAKVIATAGAGTNLAE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcaattccgaacaggcgcactggcgctcgcgttggccgtaggcgccgctccg
gccttcgccggcccggtcggttacggggccaataccaccggcggcggcaatgccatcccg
gtcaacgtcgccacgatggaggcgatgcaggcggcgatcgacaactacgccggctcaggc
ggcctagtgctcaactacaccggcagcttcaacttcgccagcatcaccgacgtgtgcacg
caatggaagctgccggccaagaccgtgcagatcaagaacaagcgcgacatcaccatcaag
ggtgccaacggctcctcggcgaacttcggcgtgcgcgtggtcggcaatgcgcacaacgtc
atcatccgcaacatgaccctcggcctgctgccgggcggcgaagatgccgattcgatttcc
ctggaaggcaattccagcggccagccgtccaacatctgggtggaccacaacaccatcttt
gcctcgctgaccaagtgtcccggcgccggcgacgcctccttcgacggcggcatcgacatg
aagaagggcgtcaaccacgtcaccgtgtcctacaactacatccacgactaccagaaggtc
gcgctcaacggctacagcgacagcgacacccagaacgccgccgcgcgcaccacctaccac
cacaaccgcttcgagaacgtggaatcgcgcctgccgctgcaacggcgcggcttgagccac
atctacaacaactacttcaacaacgtcttcacttccggcatcaacgtgcgcatgggcggg
gtggcgctgatcgaggccaactacttcgagaacatcaagaacccggtcacctcgcgcgac
agcagcgagatcggctactgggacctgatcaacaactacgtcggcggcggcatcacctgg
acggtgccggagagcaccagcaagccctacgccaacgcgacgacctggatttcgtccaag
acctacccggagccgctgggctacctgtacacggcgattcccgccgcgcaggtcaaggcc
aaggtcatcgccaccgccggtgccggcaccaacctggccgagtga
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