Xanthomonas indica: Q7W82_20315
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Entry
Q7W82_20315 CDS
T10539
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xin Xanthomonas indica
Brite
KEGG Orthology (KO) [BR:
xin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xin03032
]
Q7W82_20315
03400 DNA repair and recombination proteins [BR:
xin03400
]
Q7W82_20315
Enzymes [BR:
xin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Q7W82_20315
DNA replication proteins [BR:
xin03032
]
Prokaryotic type
DNA Topoisomerases
Q7W82_20315
DNA repair and recombination proteins [BR:
xin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Q7W82_20315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
XCI80561
UniProt:
A0AAU8I5X8
LinkDB
All DBs
Position
4759499..4761985
Genome browser
AA seq
828 aa
AA seq
DB search
MSKHLLIVESPAKAKTINKYLGKDFHVLASYGHVRDLIPKEGAVDPDDGFAMRYALIDKN
EKHVEAIAKAAKAAEDIYLATDPDREGEAISWHIAEILQERGLLKGKPLHRVVFTEITPR
AIKEAMAQPRQIAGDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFVAREYWSIAADCAHPSQHFNAKLIKLDGQKFEQFTITDGDTAEAARLRIQQ
AAQGALHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVAIGDE
GTVGLISYMRTDSVNLSQDALAEIRDVIARDYGIASLPDQPNTYQTKSKNAQEAHEAVRP
TSALRTPAQVARFLTDDERKLYELIWKRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDNKSAEDEDEGRKLPAMKPGDRVPLERILAEQHFTQPPPRYTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYVEMEGRSFRPSDVGRAVSKFLSSHFTQYVDYDF
TAKLEDELDAVSRGEEDWIPLMSRFWEPFKELVEDKKESVDRAEASGARELGTDPKTGKP
VSVRLGRFGPYAAIGSTAEDAEDKPKFASLRPGQSMHTITLEEALELFLMPRSLGQDKGE
EVSVGIGRFGPFAKRGSVYASLKKEDDPYTIDLARAVFLIEEKEEIARNRIIKEFPGSDI
QVLNGRFGPYISDGKLNGKIPKDREPATLSLDEVQKLLEETGKPVRKGFGAKKAAAKKEA
APKKSAAKKAAADAPAKPAAKKAVKKAAKKTAKKAVKKAAKKTVAKGG
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaacaaatac
ctcggcaaggatttccatgtcctggcctcgtatgggcacgtgcgcgacctgatcccgaag
gaaggcgcggtggatccggacgacggcttcgcgatgcgctacgcgctgatcgacaagaac
gagaagcacgtggaggccatcgccaaggcggccaaggcggccgaagacatctacctggcg
accgacccggaccgcgagggcgaggcgatcagctggcacatcgccgagatcctgcaggag
cgcgggctgctcaagggcaagccgctgcaccgggtggtgttcaccgaaatcaccccgcgc
gcgatcaaggaagcgatggcgcagccgcggcagatcgccggcgacctggtcgatgcgcag
caggcgcgccgcgcgctggactacctggtcggcttcaacctgtcgccggtgctgtggcgc
aaggtgcagcgcggcctgtccgccggccgcgtgcagtcgccggcgctgcgcatgatcgtc
gagcgcgaggaggagatcgaagccttcgtcgcccgcgagtactggtccatcgccgccgac
tgcgcgcatccctcgcagcacttcaacgccaagctgatcaagctcgacgggcagaagttc
gagcagttcaccatcaccgacggcgataccgccgaggccgcgcgcctgcgcatccagcag
gccgcgcagggcgcgctgcacgtcaccgacgtcgccagcaaggagcgcaagcgccgcccg
gcgccgccgttcaccacctccaccctgcagcaggaagcctcgcgcaagctcggcttcacc
acccgcaagaccatgcaggtggcgcagaagctgtacgaaggcgtggcgatcggcgacgag
ggcacggtcggcctgatctcgtacatgcgtaccgactcggtcaacctgtcgcaggacgcg
ctggccgagatccgcgacgtgatcgcgcgcgactacggcatcgcctcgctgccggaccag
cccaacacctaccaaaccaagtccaagaacgcccaggaagcgcacgaagccgtgcgtccg
acctcggcgctgcgcaccccggcccaggtcgcccgcttcctcaccgacgacgagcgcaag
ctgtacgagctgatctggaagcgcgcggtggcctgccagatgatcccggccacgctcaac
accgtcagcgtggacctgtcggccggcagcgagcacgtgttccgcgccagcggcaccacc
gtggtggtgcccggcttcctggccgtgtacgaggaaggcaaggacaacaagagcgccgag
gacgaggacgaaggccgcaagctgccggcgatgaagcccggcgaccgcgtgccgctggag
cgcatcctggccgagcagcacttcacccagccgccgccgcgctacaccgaagcggcgctg
gtgaaggcgctggaagagtacggcatcggccgtccctcgacctacgcctcgatcatccag
accctgctgttccgcaagtacgtggagatggaaggccgcagcttccgcccgtccgatgtc
ggtcgtgcggtgtccaagttcctgtccagccatttcacccagtacgtggactacgacttc
accgccaagctcgaggacgaactggacgcggtctcgcgcggcgaggaggactggatcccg
ctgatgtcgcgcttctgggaaccgttcaaggagctggtcgaggacaagaaggaatcggtc
gaccgtgccgaagccagcggtgcgcgcgagctcggcaccgatcccaagaccggcaagccg
gtgagcgtgcgcctgggccgcttcgggccgtatgcggcgatcggcagcaccgccgaggat
gccgaggacaagcccaagttcgcctcgctgcgtcccggccagagcatgcacaccatcacc
ctggaggaggcgctggagctgttcttgatgccacgcagcctcggccaggacaagggcgag
gaagtcagcgtcggcatcggccgcttcggcccgttcgccaagcgcggcagcgtctacgcc
tcgctgaagaaggaagacgatccctacaccatcgatctggcccgtgcggtgttcctgatc
gaggagaaggaagagatcgcgcgcaaccgcatcatcaaggaattccccggcagcgacatc
caggtgctcaatggccgcttcggcccgtacatcagcgacggcaagctcaacggcaagatc
cccaaggatcgcgagccggccacgctgagcctggacgaagtgcagaagctgctggaggaa
accggcaagccggtgcgcaagggcttcggcgccaagaaggccgcggccaagaaggaagct
gcgccgaagaagagcgcggcgaagaaggccgcggccgacgccccggccaagccggcggcg
aagaaggcggtcaagaaggccgcgaagaagaccgccaagaaagcggtgaagaaggcggcg
aagaagaccgtggccaagggcggctga
DBGET
integrated database retrieval system
