Xenopus laevis (African clawed frog): 100036868
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Entry
100036868 CDS
T01010
Symbol
nop2.L
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
100036868 (nop2.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
100036868 (nop2.L)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
100036868 (nop2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
Methyltransf_31
RsmF-B_ferredox
FtsJ
PCMT
Methyltransf_25
TRM5-TYW2_MTfase
Ubie_methyltran
Methyltransf_15
Motif
Other DBs
NCBI-GeneID:
100036868
NCBI-ProteinID:
XP_018080546
Xenbase:
XB-GENE-962294
UniProt:
A0A1L8FIN2
A0A974CEG7
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All DBs
Position
7L:complement(7838360..7850315)
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AA seq
734 aa
AA seq
DB search
MGRKLDPLKKVPRGPGRKAKKQHGAENELKNILQEDIEEKRMSSRSRKRAAKRRMLVEQK
AAAKLPAKNNVPANAKLKAGGKKALPGFSDDNAQWLKPAKRARKAGEEESEDDNEEDDDE
EEDEMEKEVKDGMEEEDGDDEMEEKNGEEEDAEEESEDGDDDDKEDGNGEFGGSLSLSDS
DDLQDDYGTSSGDEKDLLPIERASKKEKKKLKSEEAVKGEDSSIQLNVDSEDPFQLPTEE
ELEKELSTAPDLSTMQERIKDIVGVLQNFAQRGGGRTRQDYLKVLKKDLATYYSYGDYMI
ETLSDLFPVSELVDFLEACEVHRPITIRTNTLKTRRRDLAQALINRSVNLDPLGKWSKTG
LVIYDSSVPIGATPEYLAGHYMLQGASSLLPVIALAPQENERVLDMCCAPGGKTSYIAQL
MKNTGSVVANDMNAERLRSVVGNLHRLGVTNCIISNYDGRQISKILGGFDRVLLDAPCSG
TGIISKDPAVKTNKSVQDIQRCAHIQKELVLSAIDALDAQSQTGGFLVYCTCSITVEENE
CVVDYALKKRNVKLVPTGLDFGKEGFVRFKERRFHPSLRQTRRFYPHTHNMDGFFIAKLR
KFSNAIPNPNKDEETVTPSPEELKKEKVAKKKAAKRKAPDENDINDKAPKEKSENQKASK
VKGGNKKAPKEKGVNEKLPKEKGGNEKSPKAKAQKKKVVVKKAYMKKAAKMTGKKDKKKV
ANKKKKLFKQKKNK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaaattagacccattgaagaaggtgcctcgtggcccaggccgtaaagcaaag
aaacagcatggagcagaaaatgaactaaagaacatactgcaggaggacatcgaagaaaag
cgcatgtccagccgcagcagaaagagggcagctaaaaggcgcatgttagtggagcaaaaa
gcagcagccaaactcccagcaaagaacaatgttccagccaatgcaaagctcaaagcagga
gggaagaaagctctgccaggatttagtgatgacaatgcacaatggctgaagcctgcgaaa
agagctcgaaaggcgggagaggaagaaagtgaagatgataatgaagaggatgatgatgaa
gaagaggatgaaatggagaaggaagtaaaggatgggatggaggaggaggacggagatgat
gaaatggaagagaagaatggtgaagaggaagatgctgaagaagaaagtgaggatggagat
gatgatgataaggaggatggcaatggtgagtttggcggatccctctctctatcggacagc
gatgatctacaggatgattatggaacttcatcaggggatgagaaggatcttcttccaata
gagcgggcatctaagaaggagaaaaagaaactaaaaagtgaagaggctgttaaaggagaa
gatagcagcattcagttgaatgtggattctgaggacccgtttcagcttccaactgaagaa
gagttggaaaaggagctctcaactgccccagatctttccacaatgcaggagcgcattaag
gatatagttggggttctgcagaattttgcacagcgaggaggaggtcgaacacggcaggat
tacctcaaagtgctcaagaaggatcttgctacctactacagttacggagattacatgatt
gagacgctcagtgaccttttcccagtgtcggagctagtagatttcctggaggcctgtgaa
gttcatcgtccgataacaatcagaaccaacaccttaaagacaagaagacgtgaccttgct
caggctcttattaaccgcagtgtaaatttggatcccttgggtaaatggtcaaaaactggg
ctcgttatttacgactcttcagttccaattggtgcaacgcccgagtacttagctggacat
tacatgctgcaaggagcatctagtcttttaccagtcattgcactggctcctcaggagaat
gagagggtgctggatatgtgctgcgcaccaggcggaaaaaccagctacatcgctcagctt
atgaagaacacggggtcagttgttgcaaatgatatgaatgcggagaggcttcgcagcgtc
gtgggaaatcttcaccgtctgggggtgacaaactgcatcatctctaattacgatggccgg
cagatctccaagattttagggggctttgatagagttcttcttgatgctccatgcagtggt
actgggattatcagcaaagaccctgcagttaaaacaaacaagagcgtacaggatatccag
cgttgtgcccacatacagaaggagctggttctcagtgctattgatgctctggatgcccag
tcacagacaggcgggtttctggtttattgtacctgctccataacggtggaggaaaatgaa
tgtgtagtggattatgctttgaaaaagagaaatgttaaactagtaccaacaggactggat
tttggaaaggaaggttttgtaagattcaaggaacggcggtttcacccttcactgcgtcag
acacgaagattttacccacacactcacaatatggatggcttcttcattgcaaaactccgc
aagttctccaatgccatccctaacccaaataaagatgaagagaccgtaacccccagccca
gaagaactgaaaaaggagaaagtcgcaaagaagaaagctgcaaagaggaaagctccagat
gagaatgacataaatgacaaagcaccgaaggagaaaagcgaaaatcaaaaagcttcaaag
gttaaaggaggaaataagaaggcgccaaaggaaaaaggagtaaatgagaagttgccaaag
gagaaaggaggaaatgagaagtcaccaaaggcaaaagctcagaagaagaaagttgtagtt
aagaaagcttacatgaagaaagctgcaaagatgactggtaagaaagataagaagaaagtg
gcaaataagaaaaaaaagttgttcaaacaaaaaaagaacaaataa
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