Xenopus laevis (African clawed frog): 100036984
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Entry
100036984 CDS
T01010
Symbol
ercc3.L
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03022
Basal transcription factors
xla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100036984 (ercc3.L)
09124 Replication and repair
03420 Nucleotide excision repair
100036984 (ercc3.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
100036984 (ercc3.L)
03400 DNA repair and recombination proteins [BR:
xla03400
]
100036984 (ercc3.L)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100036984 (ercc3.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100036984 (ercc3.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100036984 (ercc3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
100036984
NCBI-ProteinID:
XP_018091136
Xenbase:
XB-GENE-1009823
UniProt:
A0A1L8EVD2
A0A974BYZ2
LinkDB
All DBs
Position
9_10L:59225313..59279379
Genome browser
AA seq
785 aa
AA seq
DB search
MGKKDKADRGDKKKSKRRHYEEEDEEEDELPGGEYQEAVPSAAGKQVDEAGTKQDEYGAK
DYRLQMPLKGDHSSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAISEPVCRPSHIHEYKLT
AYSLYAAVSVGLQTSDIVEYLQKLSKTGVPEGIVQFIKLCTVSYGKVKLVLKHNRYFVES
THPEVIQELLQHTVIRSCRLRDAEGNETELITETFTSKSAISKTSETASGPSTSQVPEGQ
DKTNVPADLYEFYEQMDKEEEEEEETQTVSFEVKQEKIEELQKQCIQLEYPLLAEYDFRN
DTMNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRK
RCLVLGNSAVSVEQWKSQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKR
SWEAERVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVD
LNFLIGPKLYEANWMELQNNGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPN
KFRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLCKPYIYGPTSQGERMQILQNFKHN
PKINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFF
YSLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEDQHQLLQKVLAA
SDLDAEEEIVAGEFGSRSSMQVSRRIGTMSSMSGADDAVYMEYHTPRNKGASNKHVHPLF
KRFRK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaaggataaagcggacagaggagacaagaagaagtccaagaggcgtcactat
gaagaagaagacgaagaagaagatgaacttcctggaggtgaataccaggaagctgttcct
tctgctgcgggaaagcaagtggatgaagctggcacaaaacaggatgagtacggagcaaaa
gactatcgactgcagatgcctctgaaaggggatcattcctctcgccccctgtgggtggca
cccgatgggcatatctttctagaagccttctccccggtgtataagtacgctcaggatttc
ctggtggccatatcggaacccgtgtgcaggccttcgcacatccacgaatacaaactcacg
gcttattcgctgtacgcggctgtcagtgttgggctgcaaaccagcgacatagtcgagtat
ctgcagaaactgagcaaaactggggtccctgaagggattgtacagttcattaagctctgc
actgtcagctacgggaaagtgaaactggtcctgaaacacaacagatactttgtggagagc
acccacccggaagtcatccaggagttgctacaacatactgtcatccgaagctgccgactg
cgagatgctgagggaaatgaaactgaactcatcactgagacctttacaagcaaatctgct
atttccaagacaagcgaaactgccagtggaccttctacctcccaggtaccagaggggcaa
gacaagacaaatgtgcctgctgatttatatgagttttatgaacagatggacaaagaggag
gaggaggaagaagagacacaaacagtgtcttttgaggtcaaacaggagaagattgaagaa
cttcagaagcagtgcatacaattggaatatcctctgcttgcagagtacgactttaggaat
gacacaatgaatccggacattaatattgatttaaagcctacagcagtgctacggccctac
caggaaaagagcctgcgcaaaatgtttggaaacggccgagcaagatctggcgtcattgtg
cttccttgtggtgccggcaagtccttggttggtgttacagctgcttgtaccgttcgcaaa
aggtgcctggtgttagggaactccgccgtttctgtggagcagtggaaatcccagttcaaa
atgtggtcaaccatcgatgacagtcagatatgccgcttcacctctgatgcaaaggacaag
cccatcggctgttccattgccattagcacatactctatgctgggacacacaaccaaacga
tcatgggaagcagagcgtgtcatggagtggctcaaaagtcaggagtgggggctaatgatc
ctagatgaagtgcacactataccagctaaaatgttccgtagagtcctgaccatagtgcag
gcacactgcaagctgggactcacagccacacttgtacgagaagatgacaaaattgtggat
ttgaatttcctgattggtccaaaactgtacgaggccaactggatggagcttcagaacaat
ggctatatagccaaggtgcagtgtgctgaggtctggtgccccatgtctcctgagttctac
agagaatatgttgccataaagacaaagaagcgaattttgttgtacactatgaacccaaat
aaatttcgggcctgccagttccttattaagttccatgaaaggaggaatgacaagatcatt
gtgtttgcagacaatgtctttgcactgaaagagtatgccattcggctctgcaaaccttac
atttatggtcccacatcccagggagagaggatgcaaattctccagaacttcaagcataat
ccaaagatcaacacaatctttatatctaaggtaggggacacatccttcgatctgccagaa
gccaacgtgctgatacagatttcatcccatggtggatcgaggaggcaagaagctcagcgt
ctcggaagagtcttgagagcaaagaaaggaatggtggcggaagaatacaacgccttcttc
tattctctggtgtcccaggacacgcaggaaatggcttattccacgaagcgacagagattt
ctggtggaccagggttacagctttaaggtgatcactaagcttgcagggatggaggaagag
gaccttgcattctccacaaaggaggatcagcaccaacttctgcagaaagtcctcgcagcc
tctgaccttgatgcagaggaggaaatagtggctggagaatttggatccagatcctccatg
caggtatctagacgcattggtaccatgagctccatgtccggagccgatgatgctgtctac
atggagtatcacacaccacgaaacaagggagcatcgaataaacatgtgcaccccttgttc
aagcgctttcggaaatga
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