Xenopus laevis (African clawed frog): 100037075
Help
Entry
100037075 CDS
T01010
Symbol
taf4.L, taf4, taf4a
Name
(RefSeq) TATA-box binding protein associated factor 4 L homeolog
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100037075 (taf4.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xla03021
]
100037075 (taf4.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
100037075 (taf4.L)
Transcription machinery [BR:
xla03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100037075 (taf4.L)
Coactivators
SAGA/TFTC/STAGA complex
100037075 (taf4.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
100037075 (taf4.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
100037075
NCBI-ProteinID:
NP_001091268
Xenbase:
XB-GENE-865788
UniProt:
A2BD93
LinkDB
All DBs
Position
9_10L:15053419..15096292
Genome browser
AA seq
1016 aa
AA seq
DB search
MAAGSDLLDEVFFNTDVDDKVVSELVGSLESQLAAAAHQHHHHHQQQPPAEARSQALANH
VTSPGVGAASAGGQPEAKIGLSPEVPKTGAAVPGVQGGVINSRPQTTAQPDGTQSAIPEA
PGVLSQAKAGVLGTMASTLPNHSSGNGKNATLQTMNGSNVVINSHGPGGHGTPYQGNSNL
MNNGPAPVTKGGVNPGANTVIQTFLGTTNVASSVISSSSTSTAGAAGQQTGMAGVPTSVA
LVRPLLHQGVPATQNGSNTVINSPLSTPAGVSLQMNSQPSPVIKSESPKTIIQPPQQSQP
NPGNMVLAQTMQAGHPGPGGAVSAPATLTAMGKATVGAVPLNLPRTPTAPVGGIRATIAP
PMLAPRVQQPQQNPASVQNFQLPPGMVLVRSENGQLLMIPQQALAHMQAQAQAQAQAQAQ
SQSQNTMVPRPATPTSAPPVQISAVQSPGAPLLARQVTPTIIKQVTQTPTTVQPTTTLQR
PPVVQNQIVLGSTAQTATLGTATAVQTGTPQRPVQGAATPATATTETMENVKKCKNFLST
LIKLASSGKQSSETAANVKELVHNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLP
ALRQLTPDAAAFIQQSQQQQPHTQATTALTAVMLSSSVQRTAGKTTATVTNTLQQPVISL
TQTAQSKPGQPTPLVIQQAHKAGAVVRPPHVTLTQPMVALRQPPNRIMLTTQQLQLNQLQ
TVPVAKQALVQGAKTMSAISAQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEES
ARILATNSELVGTLTRSCKDETFLLPALLQRRILEIGKKHGITEIHQDVVSYVSHATQQR
LQSIVEKISETAQQKNISHKDDDRYEQTSDVRTQLKFFEQLDHIEKQRKDEQEREILMRA
AKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVESPGPGSGS
ESSSTSTATASSSAGGSSRQFTRQRITRVNLRDLILCLESERETSHSLLLYKAFLK
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggttcggatctgctggatgaggttttcttcaacacggacgtggacgataaa
gtggtcagcgaactggtgggatccctggagtctcaactggccgccgcggcccaccagcac
catcatcatcaccagcagcagccccccgccgaggcccgtagccaggccctggctaaccat
gtcaccagcccgggggtaggggcagccagtgcggggggacagcctgaggccaagataggg
ctctccccggaggtgcctaagacgggagccgctgtccctggagttcaaggaggtgtcatt
aacagccgaccacaaaccacagcccagcctgacgggactcagtctgctatacctgaagca
ccaggagttcttagccaggctaaagctggggttctgggcaccatggcatccactctgccc
aaccacagttcaggtaatggtaaaaacgccaccctacagaccatgaatgggagtaatgtt
gtgattaattcacatggacccgggggtcatgggaccccttatcaggggaacagcaacctg
atgaacaatggacccgctcctgtcactaagggtggagtgaacccaggagctaacaccgtt
attcagacttttcttgggactactaatgtggcatcctctgtcatctcttcctcatccaca
tcaaccgctggagcagctgggcaacaaactggcatggcgggtgtacccacgagtgtagca
ttggtgagacctcttttgcaccagggtgtgcctgccactcagaatgggagcaatactgtg
atcaattcccctttgtcaacccctgctggagtatcgctgcaaatgaacagtcagcccagt
cctgtaatcaagtcggaatcccctaaaacgattatccagccccctcagcagagccagcct
aaccctggcaatatggtgttagcacagactatgcaagcaggccatcctggtcctggagga
gctgtgtctgcccctgctactcttacagcaatgggcaaagctacagtcggtgccgtgcct
ctcaacttgccaaggactcctacagcaccagtcggtggcatcagggctacaatcgctcca
cctatgcttgctccacgcgtgcagcagcctcagcagaacccagcgagcgttcagaatttt
cagcttccgcctggaatggtccttgtgaggagcgagaatggccagcttttaatgatccct
cagcaagccttggcccatatgcaggcgcaagctcaagcccaagcccaagcacaagcccag
tcgcaatctcagaacaccatggttccccgtcctgccactccaaccagtgcccctcctgta
cagatttctgcagtgcagtctccaggagccccgctcttagccagacaggtcacaccaact
atcatcaagcaagtaactcaaacgccaacgactgtgcagcccaccacgacactacagcgc
cctcccgttgtacagaaccagatagtgctgggcagcactgcacaaactgccactttgggg
accgcaactgccgtacagactgggacacctcagagacctgtgcaaggagctgctacccct
gccacagccacaacggaaaccatggaaaatgtgaagaaatgcaagaattttttatccacg
ctgatcaagttagcttcatcgggtaaacagtcctctgagaccgcagcgaatgtgaaagaa
ctagtgcacaacctcctggacgggaaaattgaagcagaggatttcacgagtagattgtac
agagaactgaattcttcacctcaaccttaccttgtgcctttcctgaagaggagcctccct
gccttgcgccagttaacgccggatgctgcagccttcatccagcagagtcagcagcagcag
ccccacacgcaggccacgacggccctcactgcagtgatgctgagtagctctgtgcagcgc
actgctggcaaaactaccgctactgtcaccaatacattgcaacagccagtcataagcctc
acgcaaactgcacagtccaagccggggcagcccaccccactggtcattcagcaggcacat
aaggcgggagcggtggtacgtcccccacatgtgacattaactcagcccatggtagcactt
aggcagcctccaaatcggatcatgctcaccacacagcagttgcagttaaaccaactacaa
acagttccagtggcgaagcaagcgttggtacaaggtgcaaaaacaatgtctgcaatatcc
gcgcaggctgcggcagcacagaaaaataaattaaaagagccggggggaggatcgttcaga
gatgacgacgatattaatgatgtagcttctatggccggtgtgaacctctctgaagaaagt
gcaaggatattggcaacgaattcggagttagtgggcacgttaacgcgctcctgcaaagac
gagacgtttcttctgcctgcactgctacagaggaggatattggaaataggtaaaaagcac
ggaatcacagaaatccatcaggacgttgtcagttatgtctcccacgcaacacaacagcgg
ctacaaagcattgtagaaaaaatctctgaaacagcgcagcaaaagaatatttcacacaag
gacgacgataggtatgaacaaaccagcgacgtacggacgcagctcaaattcttcgagcag
cttgatcatatcgagaagcagaggaaagatgagcaggagcgagagattcttatgcgggca
gctaagtctcggtcaaggcaggaggatccggaacaattacggctaaaacagaaggctaaa
gagatgcaacagcaggaactggcacaaatgaggcagagagatgctaatttaacagcgcta
gcagctattggccctcgaaagaagaggaaagtcgaatcaccgggccctggttctggttca
gagtcgtccagcacaagtacagccacggccagcagttctgcaggagggagcagccgacag
tttacaagacaaaggataacgcgagtcaatctcagggacctcatattatgtttggagagt
gaacgagagacaagccattcactattgctatacaaagcattccttaagtga
DBGET
integrated database retrieval system
