Xenopus laevis (African clawed frog): 100037127
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Entry
100037127 CDS
T01010
Symbol
vcan.L, vcan, Xversican
Name
(RefSeq) versican L homeolog
KO
K06793
versican core protein
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04514
Cell adhesion molecule (CAM) interaction
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100037127 (vcan.L)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100037127 (vcan.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xla00535
]
100037127 (vcan.L)
00536 Glycosaminoglycan binding proteins [BR:
xla00536
]
100037127 (vcan.L)
04091 Lectins [BR:
xla04091
]
100037127 (vcan.L)
Proteoglycans [BR:
xla00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
100037127 (vcan.L)
Glycosaminoglycan binding proteins [BR:
xla00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
100037127 (vcan.L)
Lectins [BR:
xla04091
]
C-Type lectins
Lecticans
100037127 (vcan.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
Sushi
hEGF
EGF_TEN
EGF_3
ig
ParM_N
EGF_2
I-set
EGF_CA
cEGF
Motif
Other DBs
NCBI-GeneID:
100037127
NCBI-ProteinID:
NP_001104185
Xenbase:
XB-GENE-922310
UniProt:
A8WAA4
LinkDB
All DBs
Position
1L:complement(196823930..196909222)
Genome browser
AA seq
3190 aa
AA seq
DB search
MLLEIKYIFWICSAFSLTNAFRAVKLEKSSGVKGSLSGRVNLPCFFSTIPTLPPSYNITN
EFLRIKWTKIVQSRDGKDPKETTVLVAQSGSIKIGQHYRGRVSVPSHPEDIGDASLTIVK
LRASDAGAYRCEVLFGIEDTQDTVSLDVSGVVFHYRASTDKYSLDFEAAQKACIDSGAQI
ATPGQLKAAYEDGFEQCDAGWLSDQTVRYPIRSPRAGCHGDKMGKEGIRTYGRRPALEKY
DVYCFVDELEGDLFHTTVKNKFTFEEAKQECEKKNAALATVGDMYAAWRKGFDQCDYGWL
ADGSVRYPVSVARPQCGGGLLGVRTKYRYSNQTYFPHSQERYDAYCIQGKRNITEAVSIR
LILPTEASTTSVIKTVEKLPEKVTIKPVYSDGRRPATESISHLKAETGVTPDTKQKETVV
PTDPSALSFQEEGTLASKLESTQDVIEPYAYQTEKIGVESEITKSPTGYPVEQQYSIPDN
SIKLTEVLYQSLQPPKGSMEAKSEEIIPTVIIHHEIVSDKDIITSLPEIRTGPEETFESS
VVTVSSLKQDSDASSTQPELDVFTVYKTSTSMQPAVTSGFDSSEEGSQPTVSSESIVTKE
KHVVSTVHEDEPTDKVQESTTLPVTEDVIIESEDSFAAVEEESVLQSSRLSPSDSPTQVT
SPVLDVTEATSTSKEPKPTDTVDKVPETHISHKETSVEQITLKPVSISTQKPHLIDVEPE
EETSKETIVIDESVSRLKVTTESDMPGKQEEDVDSEYLTSGTSGKEPTQKPECEDTSAEA
ETNVHETDLSQNRSSINVIVVHLRDNETGPVESIIHVLDQGGLQLPEHNESSEENDYPII
IDVIHIVPPDIDNDSDCDNTTDVSTPPPLQFINGKQEITTAPGDSNAEELRQDQIESATP
SENVSLTQFSEVTERVISQTDVPSITTSLVVDIGESISHTKLQEPEFSGDTEFYAETSTS
QKTDLPPTPSMLSLNRSEHLSTLESLPDTDSKVLSTIESVTEESRIALEHVTDAPSSQLI
CEIATHTSEQTLSPKTEKTPKEDFIPTEEYTKETEEPSIVTEASIVYAEPEGSGDLDSQS
IVRTDAPSSQLIPEIGTHTSEQTLLPKTEKTPKEDFFPTEEYTKETEESFQDTDSKVLST
IKSVTEESRIALEHVTDAPSYHLISEIATHTSEQTLLPKTEKTLKEDFIPTEEYTKETEE
PSIVTEDSIVYAEPEGSGDLDSQSIVSVTASVQRPEEIKSSPTKVIIKADTPMPTSFPGI
DLSSEEVKSVTSVFDQVTKIITTTKEEYEGSIFTVDPTKSFGLFEEGEGSATDGVILDQQ
PAVSSSRYATETVPTVTDSAQVKPTDFITFSSEAISSHEIIKTVTTSDISSHSSASQVVT
VDSLLMPEGSGDMDDANKYVSSTVSQEKHGLEILSTDSAKTADTLLKYAITEESVILKED
YVPTETSDKQSTTAVTEEIEKFTITETEEESVVSGDPESPSEKLQVSTVQSPLTDGDSKQ
EVIIYSTHFPPESNHTAVEHLGSSPFPVLVSTASSSIDLAISDKTSALKTSTILPFTGEG
SADGDLEIILTSKPSLDSIKPDPEAVTVFTIFTDDKTIETGITHSLTPSNISSDLPVVDQ
GSGDLINSETEIEITTSKDFATVSTIELTESADTTDVLGGTVVKQLAAEPETFGTETPPS
LEHITTLEPQKTIFTDSLFTDTGSGDTDDMVTFSPTLTSLSQRKHETETIRAVTSVELST
VGLEVETEADLKETLRVESEITNDKEKPQLQTTSITSQPTSEQATQVPLKYILSTEYPIS
EGSGDEHQFAESTTSKTTEHETTSIITAQSEDEHSTKIVFEGSGDESIGTGTTIYVTKTK
SQIEDISSVFPTEESTVSLEADTVKIDLHVENHTKEAYTAESINTDTVSETGTQACCSTP
VHPTSGHISLHTVQETASAHSPVIIESSGDTEDISTATETYATKTDIEDISTAFPLEKTS
LSPARETSFDLKIDTKDAATVENETSFSTASQEISKVVTQATVIVPGDSGTKVSVITDSP
TYESSGDEEILIGTTTHTATPKLDSVIISTSPPTKEHTESAEAETDFELADIKEKETGEL
DTVISTDQEVSKFTTQASSTLYIYSPTEDISMFPAKTLVSTLPPDESSGDGVDSFPVTKT
YAIKIHSEDISTIIPTEQPKMSLSIETSEASVILETTTKEIKVDSEIDISTDAHQLSVPG
TQASATISVPPATTVFIEDSSGDDADIFTDTYPIETKVDSKADRTGFPVEKTTVGFTAEV
ADSKTGVSGEAEIESETTVILPSHSTSEITPSLPEKEIISTDESSGDDGFLLTMSKAYAT
ESEPVSITIVPTEGLQVSLEVETSESGLKSESSTEDDEAAESEKGIKTDMLETSTIVTQA
IGISSHVAGEPITSSSVRKHSTTDSVFLDQGSGDQSQGDLLGVATTETSEVKTEGATEAI
GTHSAATDMQELSKTATQTPSATLRPEISQYVTDTPHKEIISTKSEILEAGSGTDEDMFQ
DVVSTPVIKTESKSPESRYVSIVQPTTEYTEHTALPSTIKDDDINEPREYIFSTKSPDSD
VGSGAEVGTSEVKTSTEETRALKPQFILTTNAPEKATDGITAYLSSSFMGEVSEIPLIEQ
GSGDESQQATVIDEETKTESKFEDQTETIMSPVSEYPKILEFKNVTTDRDSEIPTKESET
PEPKIRVSTSPKEILPEVKSTQDVPISHTLSMTELTIGLEDEVTSKPSVLIFEESPVSTI
WEETEKNETISEVISASHSATEFILDDKTSKQISEELELSTVEKDIKLEFKSTPATILKT
TESLSTKKTFLYEEGSGDLISMTIKEDKPIYTVVTLPFVEDDEAPVSTSVTKDLTELQFA
SQDPCKVNPCQGGGTCYARGGTSFVCTCMPGFSGDQCEIDIDECQSNPCRNGAACVDGID
SFKCICLPSYTGSLCEQDTEVCDYGWHKFQGHCYKYFAHRRTWDAAERECRVQGGHLTSI
TSNEEQTFVNRLGHDYQWIGLNDKMFENDFRWTDGSTMQYENWRPNQPDSFFSAGEDCVV
IIWHENGQWNDVPCNYHLTYTCKKGTVACGQPPFVENAKTFGKAKPRYEINSMVRYHCKE
GFVQRHLPTIRCRGDGRWDLPKVSCLNPSNFQRTYSKKYYYKFTPPEMRTSMNSPKHHHS
WSRTWQDSPR
NT seq
9573 nt
NT seq
+upstream
nt +downstream
nt
atgttattagaaataaaatacatattttggatatgctcagcattttcccttacaaatgca
ttccgtgcagttaaattggaaaaaagttctggagtgaagggttcattatctggaagagtg
aatctgccatgttttttttcaaccataccaacattgccacccagctacaatattacaaat
gagttcctgcgaatcaaatggaccaagattgtccagagcagagatggaaaggacccaaag
gaaaccacagttttggtggcccaaagtggaagtatcaaaattggacagcattatagaggc
agagtgtctgtgccgagtcatcctgaagacatcggagatgcatctttaacaatagttaag
ctacgtgccagtgatgctggtgcttaccgatgtgaggtcttgtttgggattgaagatacc
caagacaccgtttctttggatgtttcaggagtcgtgtttcactaccgagcctctacagac
aagtactctttggactttgaggctgctcagaaagcttgtatagacagcggtgcccaaatt
gctactccaggacaactgaaagcagcctatgaagatggttttgagcaatgtgatgctgga
tggctttctgaccagactgttagatatccaatccgctcacctagagctggctgccatggt
gataaaatgggaaaggaagggattcgcacctatggaagacgccctgctttagagaaatat
gatgtgtactgctttgtggatgaactggaaggcgacctgttccacacgactgttaagaat
aagttcacctttgaagaagccaagcaggagtgcgagaagaagaatgcagctcttgccacc
gtgggggatatgtatgccgcgtggagaaagggatttgaccagtgtgattatggttggctg
gctgatggaagcgttcgctacccagtatctgtggcccgaccccagtgtggaggaggtttg
cttggagttcggacgaaataccgctacagtaaccagacttatttccctcattcacaggag
agatatgatgcctattgtatccaaggcaaaaggaatataactgaagctgtatccattaga
ctgatattaccgactgaagcttcaaccaccagtgtgataaagacagttgaaaaattgcct
gaaaaggtaacaataaagcctgtttattctgatggacgacgacctgcaacagaaagcatt
tctcatttgaaagcagaaactggtgttacgcctgataccaagcagaaagaaacagtagtt
ccaacagatccgtccgctctttcatttcaagaagagggcaccttggcttctaaattggaa
agtacccaagatgtcatagaaccttatgcttatcagactgagaaaataggtgtagagagt
gagatcactaaaagcccaacaggttatcccgtggagcaacaatattctatacctgataat
tctataaaactgacagaggttttatatcaaagtttgcaacccccaaaggggtcaatggaa
gccaaaagtgaagaaattatcccaacggttataatacatcatgagattgttagtgataaa
gacatcatcacgagcctacccgaaataagaacaggacctgaggaaacctttgaaagtagt
gttgtgactgtgagcagtttaaaacaagattctgatgcttcaagcacacaacccgagttg
gatgtatttacagtgtacaaaacatccacctctatgcagcctgcagtaacttcaggcttc
gattcctctgaagaagggagccagccaactgtctcttcagaatctatagttacaaaagaa
aaacatgtagttagtacagttcatgaggatgagcccacagataaagtccaggaaagtaca
acattgcctgtcacagaggatgtaattatagaatctgaggacagttttgcagctgttgaa
gaagaaagtgtgttgcagtcaagccggttatcaccttcagacagtccaacacaagtcaca
agtccagtattggacgtaactgaagccacttccacaagcaaagaaccaaaaccaactgat
acagtggataaagttcccgaaacacatatctctcataaagagacatcagtagagcagata
acacttaaacctgtttctatttctactcagaagccacatctcatagatgtggaacctgag
gaggaaaccagcaaagaaacaatagtgatcgatgagtctgtttctcgcctaaaagttaca
actgaatctgacatgccaggcaaacaggaggaagatgtcgactcagaatacctgacaagt
ggaacttctggaaaagaacccacccaaaagcctgaatgcgaggacacctcggctgaggct
gagacaaatgtacatgaaacagatttaagtcagaatcgttcatcaatcaatgtgatcgtt
gtgcatctccgtgacaatgagacaggcccagttgaatcaattattcatgtattggatcaa
ggaggacttcaattacctgaacataatgagtccagtgaagagaatgactacccaataata
atagatgttatacacatagttccaccagatattgataatgactccgattgtgacaatacc
actgatgtttcaacgccccctccattgcaatttatcaatggcaaacaagagatcacgact
gcaccaggagattccaatgctgaggaacttagacaggatcagattgaaagtgccacacca
tctgaaaatgtttcacttactcaattcagcgaagttacagagcgagtaatatcacagaca
gatgtccctagcattacaacatcactggttgtagatattggggaaagcatctcacataca
aagttacaagaacctgaattcagtggggacacagaattttatgctgagacttctacatca
cagaaaactgatttgccacccacaccgagtatgctttcacttaatagatcagagcattta
tcgacactggaatccttaccagatacagattctaaagttttgagcactattgaatccgtt
actgaagagagtagaattgcacttgaacatgtgacggatgcaccctcatcccaactgata
tgtgaaatagccacccatacaagtgaacaaactttatcaccaaaaacagaaaaaacacct
aaagaggattttatcccaacagaggaatatacaaaggagacagaggaaccatctatagtc
acagaagcttccattgtttatgctgagcctgaaggttcaggggatttagattcacagtcc
attgttaggacggatgcaccctcatcccaactgatacccgaaataggcacccatacaagt
gaacaaactttattaccaaaaacagaaaaaacacctaaagaggattttttcccaacagag
gaatatacaaaagagacagaggaatcctttcaagatacagattctaaagttttgagcact
attaaatcagttactgaagagagtagaattgcacttgaacatgtgacggatgcaccctca
taccatctgatatctgaaatagccacccatacaagtgaacaaactttattaccaaaaaca
gaaaaaacacttaaagaggattttatcccaacagaggaatatacaaaggagacagaggaa
ccatctattgtcacagaagattccattgtttatgctgagcctgaaggttcaggggattta
gattcacagtccattgttagtgtgactgcttctgtgcaaaggccagaggaaatcaagagt
tctccaacaaaagttataataaaagctgatacccctatgcctacatcattccctggtata
gacttgtcatctgaagaagttaagtcagttacatcagtatttgatcaggtgacaaaaatc
ataaccacgaccaaagaagaatacgagggaagtatatttactgtagatccaacaaaaagt
tttggattgtttgaagaaggagaagggtcagctacagatggggtcattttagatcagcaa
cctgctgttagcagcagtcggtatgctacagaaactgtacctacagtaactgactcagct
caagtaaagcctactgatttcataactttttcttctgaagccatatcttctcatgagatc
atcaaaactgtaactacttctgacatttcatcccacagttcagcaagtcaagtagtcact
gtagactccttgttgatgccggaaggctcaggagatatggacgatgcaaataaatatgtt
tcaagtactgtatcacaagagaaacatggtcttgaaatcctgtccacagattcagctaaa
actgcggacacattgttgaaatatgccataacagaagaaagcgtcattctgaaagaagat
tatgtacctactgaaacttcagataaacaatcaactacagcagtgacagaagaaatagaa
aagtttaccataactgaaacagaagaagaatctgttgtgtctggtgatcctgaatcacca
tctgaaaaattacaggttagcacagtgcaaagtccattgacagatggggattccaaacaa
gaagtaatcatttattcaactcattttccaccagaatcaaatcatacagctgtagaacat
ttaggttcctctccattcccagtcttggtgtctacagcctctagcagtatagacttagcc
atttcagataaaacatctgctttgaaaaccagcaccattttaccatttacaggcgagggt
tcagctgatggtgatttggagattattcttacttccaaaccgtctttagattccataaaa
cctgatcctgaagcagttacagtatttacaatctttacagatgataaaacaattgaaact
ggcataactcacagtttgacaccaagtaacataagctcagatttaccagtagtagatcaa
ggttctggagatcttattaactctgaaacagaaattgagataacaacttcaaaagacttt
gctactgtctctactatagaacttacagaaagtgcagatactacagacgttttaggagga
acagtagtgaaacaattagctgcagaacctgagaccttcggcacagaaacacctccatca
ctggaacacattacaacattggaaccccaaaaaactatttttactgactcattatttact
gatacaggttcaggtgacacagatgatatggtcacattttcccccaccttgacttcatta
tcccaaagaaaacatgaaactgaaaccattagggctgttacgtcagttgaactatccaca
gtgggcctggaagtggaaacagaagcagaccttaaagaaacactgagagttgaatcagaa
ataactaatgataaagagaagcctcagttgcaaacaacaagcataacatcacagcccact
agtgaacaagctacacaagtgcctctcaaatacatacttagcactgaatatccaatatct
gaaggatcaggagatgagcatcaatttgctgaatcaactacttccaaaactacagaacat
gaaactacaagcattataacagcacagtctgaggatgaacatagtacaaaaatagttttt
gaaggttcaggagatgaaagcattgggacaggtactacaatatatgttactaaaactaaa
tcacaaattgaagacatcagttctgtatttccaaccgaggagtcaaccgtgagtttagaa
gcagacacagttaaaatagatcttcatgtagaaaaccataccaaagaagcatatactgcg
gagagtataaatacagacacagtgtctgagactggaacacaagcatgctgcagcacacca
gtacatccaactagtgggcatatttctttgcatacagtgcaagaaacagccagtgctcac
tcacctgttataattgaaagctcaggagacacagaagacatttccacagctacggaaaca
tatgcaaccaaaacagacatagaagacatcagcacagcattcccactggaaaaaacctca
ttgagtccagctagagaaacaagttttgacttgaaaattgataccaaagatgcagcaaca
gttgaaaatgaaacaagtttcagtacagcatcacaagaaatatcaaaggttgtaacacaa
gcaactgtcatagtaccaggagattcaggtaccaaagtaagtgtaatcacagactcacct
acttatgaaagctccggtgatgaggaaattcttattggcaccacaacacatacagctaca
cctaaactcgacagtgtaatcatcagcacatctcccccaactaaagaacacactgaaagt
gcggaagcagaaacagattttgagttagctgatattaaagaaaaagaaacaggtgaacta
gatacagtcattagtacagatcaagaagtgtctaagtttactacacaagcatcgtccact
ctatacatatattcacctactgaggatatctctatgtttccagccaaaacactagtcagc
actcttccaccagatgaaagctcaggagacggagtggacagtttcccagttactaaaaca
tatgcaattaaaatacatagtgaagacatcagcacaataattccaactgaacaacccaaa
atgagtctatcaatagaaacaagtgaagcaagtgttatcttagaaaccaccaccaaagaa
ataaaagtggactctgaaatagatatcagtacagatgcacaccaactgtctgtacctgga
acacaagcatctgcaaccataagtgtgcccccagctaccactgtttttattgaggatagc
tcaggggacgatgcagatatttttacagatacatatccaattgaaacaaaagtggacagc
aaggctgatagaacaggttttccggttgagaaaacaacagtgggttttacagcagaggta
gccgattctaaaacaggggtcagcggagaagcagagatagaatctgagacaacggtcatc
ttaccatcacattcaactagtgagatcactccatctcttccagagaaagaaataatcagc
acagatgaaagttcaggagatgatggcttcttactgacaatgtctaaagcctatgcaact
gaatctgaaccagtcagcatcacgattgtccctactgagggactccaagtgagtttggaa
gtggaaacaagtgaatcaggtcttaagtcagaaagttctaccgaagatgatgaagcagct
gaatctgaaaaaggtattaaaacagatatgctagaaacatcaacaatcgtaacacaagca
attggaatatcatcacatgtagctggagagccaattacatcaagctcagttagaaagcat
tccaccactgattcagtatttcttgatcaaggctcaggagaccagtctcagggtgattta
ctaggggttgcaactactgagacttcagaagtaaaaactgagggggctactgaagccatt
ggtacacattctgcagctacagacatgcaggaattatcaaagacagcaacacaaacaccc
agtgccacactaagaccagaaattagccaatatgttacagataccccacataaagagata
atcagcactaaatcagaaattttggaagcaggctcaggaactgatgaagacatgttccaa
gatgttgtatctacacctgtgataaaaacagaatctaagtcaccagaaagtagatatgta
agcattgttcagccaactacagaatacactgaacacacagctctaccaagcacaattaaa
gatgatgatataaacgaaccaagggaatatattttcagtacaaaatccccagatagtgat
gttggttcaggtgctgaagtaggaacaagtgaggtaaaaacctctactgaagaaacaagg
gcattaaaaccacaattcattttaactaccaatgcacctgaaaaggctacagatggtata
acagcatatctcagcagtagctttatgggtgaagtttctgaaatccctctaattgagcaa
ggttctggggatgaaagccaacaggccacagtaatagatgaagagaccaaaactgaaagt
aagtttgaagatcaaacagaaactattatgtccccagtctcagaatacccaaaaatactg
gagtttaaaaatgtcacaacagacagggactcagaaatccctaccaaggaatctgaaaca
ccagagcccaagatacgtgtcagcacaagtcccaaggaaatattgcctgaagtaaaatca
acacaagatgtgccaatatcacacactctgtctatgacagaattgacaataggcttggaa
gatgaagttaccagcaagccatcagtattaatttttgaagaaagcccagtcagcacaata
tgggaggaaacagaaaaaaatgaaactattagtgaagtcattagcgcatcgcattcagca
actgaatttattcttgacgacaaaacaagcaaacagatttctgaagagcttgaattatca
actgtagagaaagatataaaactggaatttaaatcaacacctgcaacaattctgaagacc
acagagtctctgtccactaaaaaaacattcttgtatgaggaaggatcaggagacttaatt
tctatgactatcaaagaggacaagccaatatatacagtcgttactctaccatttgtagaa
gacgatgaggcacctgtcagtacaagtgttactaaagatttaactgaacttcaatttgca
agtcaagacccatgcaaggtaaatccatgccaaggtggagggacctgttatgctcgcggt
ggtacatcctttgtctgtacatgtatgcctggtttcagtggagatcagtgtgaaattgat
atagatgaatgtcagtcaaatccttgccggaatggagcagcatgtgttgatggcatagac
tcctttaagtgtatctgtcttcctagctacactggatcactttgtgaacaagatactgaa
gtctgtgactatggctggcacaaattccaaggtcactgctacaaatattttgcccatcgg
cgcacctgggacgcagctgagagagagtgccgggtacaaggcggtcacctgacaagtatt
acgtccaatgaagagcagacgtttgtcaaccgtttagggcatgattaccagtggattggc
ctcaacgataagatgtttgagaatgatttccgttggactgatggaagcacaatgcaatat
gaaaactggaggccaaaccaaccagacagtttcttctctgctggcgaagattgtgtcgtt
attatttggcatgaaaatggccagtggaatgatgtaccatgcaactaccatcttacttac
acctgcaaaaagggaacagttgcttgtggacagcctccttttgtagaaaatgccaagacc
tttggaaaggctaaacctcgctacgagataaactctatggtcagataccactgtaaagaa
ggttttgtacagcgccatttgccaaccataagatgcagaggtgacggacgatgggatctg
cctaaagtgtcatgtctgaatccttccaatttccaaaggacttactctaagaaatattat
tataagtttactccacctgagatgaggacttccatgaattctccaaaacaccaccacagc
tggagcaggacttggcaagactccccacgctga
DBGET
integrated database retrieval system
