Xenopus laevis (African clawed frog): 100037140
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Entry
100037140 CDS
T01010
Symbol
lmo7.S
Name
(RefSeq) uncharacterized protein LOC100037140
KO
K06084
F-box protein 20
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100037140 (lmo7.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
100037140 (lmo7.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100037140 (lmo7.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
100037140
NCBI-ProteinID:
NP_001091314
Xenbase:
XB-GENE-17333595
UniProt:
A2RV71
LinkDB
All DBs
Position
2S:complement(117511820..117607103)
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AA seq
1322 aa
AA seq
DB search
MEWNENSEVSCDLAYSETQRWIEEVTGQNFGNKNFRSALENGVLFCDLINTIKPGIIKKI
NRLSTPIAGLDNINIFLRACEKLGLKEAQLFHPGDLQDLSSRVTVRQEETDRRLKNVLIT
VYWLGRKAQSDSYYNGPYLNLKAFEGLLGQTLIKALEESSSLKRSGRDSGCSDLWYRDSV
TSPVVHKRDDSWDSLDSLGSKSYTSFSSDTTIKGSSEGGDSETESELTDKMQDSKDDMSY
RRVSAVEPKATSNFNQFLPNKTKNFNYMPAPLRKKRIDKNEDNRRSWASPVFTEPDGTFS
RSKSLEAITAEELISNRQVRYEELQKIRSQLHEQDQQWQDDLTKWKSRRKSFTSDMQKKK
TEREELEKLAVESTERTYKTFREMRQERESRNQDNYYMNKERPEDRKMYSSNDDVFGDVP
SKRMMERSYTVAVEAPYTMSKGTAQGTSNVQKKGNDSGAISELLPTHSTVETDDTYTIKA
NSSYTEQGPENSDLKTSKSLFESSYMVESGAPYNNKKETVYSITSYEKQDNGPPLKNGSL
LGEQHSYSSFVTESKPIPGSASLPRSYQKNDTSRLSSVVTPRPFGIQSKGITSLPRSLTV
DDASKYNGNLGSTKNSSTFNSYFKVEEKPNRTQPSKDDEKENTRRSTSPKPFPAVSAAGD
VTSFARGVEQTKVPGPLDQYSDLRISINQKPGSSHDFGFKTSWNSAGVFVKSVDVGSPAE
FCQLHVEDEILSLNGTKVSSMDYNKWVEAIDHAVETGNLAMDVRRYGKNAWGRDPPSLPY
KSHKTLNLTSMDPKLIGSPENKWIDASRSQSTSLKKDIPDSGNATSRFNGIQDSAQKESE
SISLKNNKRRSQFFEQGSSDSSLLDMPVPSINVSTRRSWDPEDERKRQEKWLKEQEQILQ
EKYKLEQEKLRQEWERAQKEAENERFQQIQQEQAPSSLPVTSQSSYWKTFGSEVSDDVQS
SEEEDRQKERSSEELESERQWKRAEEERLKYLEAQHHQEVEEQRRRQLEQENLRHQAEEE
NRRRQAEESERKRQEEERKKKEEEIRFHRAVEEERRRKRFQEEEEEQRQKSEKDARNNVV
LKSDDSHTPGNGDHTDSGPSESTGSMQPRTYKEKSQVSSEVERQRILQEMKKKASLNNDN
SWIRQRSSSMTKDTSSLPNYMRRGESLDNLDSTSGLQRVSPWANQSSSYNSMSSSQDFSR
PSQVVSTSNRTFLSNSSNSLPQSSAGPLKSASLSQTQTSNQQRNKSVSGKKLCSYCNNSL
GKGAAMIIESLGLCFHLQCFKCTACETDLGGSESGAEVRIRNNELYCNSCYIRFKMGQPT
SM
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggaatggaatgaaaattcagaagtgtcttgtgacttggcttattctgaaacacaaagg
tggattgaggaagtcactggtcaaaactttgggaacaagaattttcgctctgcccttgaa
aatggggttctgttttgcgacctaattaacacgattaaacctggaatcatcaaaaagatc
aatcgcttatccacacccatcgctggcctggataatatcaacatcttcctgcgagcctgt
gagaaacttggactaaaagaagcccaactttttcaccctggggatcttcaggatttatca
tctcgagtcacagtccggcaagaagagaccgatagaagattaaaaaatgttctgatcact
gtatattggcttggaaggaaagcacaaagcgattcatattataatggtccttacctgaat
ctaaaggcttttgaagggttattggggcaaactctgattaaggcactagaagaatccagc
agtttgaaacgaagcggcagagatagtggttgtagtgatttgtggtatagagacagtgtt
acttcacctgttgttcataaacgagacgattcctgggacagtttggactctttgggttca
aagtcttatacaagtttctcatcagacacaactattaaagggagcagtgaaggaggagac
agtgagacagaatctgaacttacagacaaaatgcaggacagcaaagatgacatgtcctat
cgtagggtgtcagctgtggagcctaaagcgacttcaaattttaatcaatttctaccaaac
aaaaccaaaaacttcaattacatgccagcgccactgagaaaaaagcgtattgataaaaat
gaggacaacaggaggagctgggcaagcccagttttcactgagccagatggaacgttttcc
aggagcaagtcactggaagcgatcacagcagaggagctgattagcaaccgtcaagttcgc
tatgaagaattacagaagataagaagtcagctacatgagcaggatcagcagtggcaggat
gatttaacaaaatggaagagtcgtcggaaaagcttcacgtcagatatgcaaaagaagaaa
actgagagagaagagttggaaaaattagcagttgaaagtacagaacgaacatacaaaaca
ttccgagagatgcggcaggagagggaatcccgaaatcaagataattattacatgaacaaa
gaaaggccagaagacaggaaaatgtactcttccaatgatgatgttttcggtgatgtacca
tcaaagcgtatgatggaaagaagttatactgttgcagtggaggccccttataccatgagt
aagggcactgcacagggtacatccaatgtccagaagaagggaaatgatagtggtgcaata
tctgagctgctcccaactcattctacagttgaaacagatgatacttacactataaaggca
aattccagttacactgaacagggtccagaaaattctgatttgaaaacatccaaatcactg
tttgaaagcagttacatggtggaatctggcgcaccttacaacaataagaaagaaaccgtt
tattccattacaagttatgaaaagcaagacaatggcccacctttgaaaaacggtagcctg
ttaggcgagcagcattcttacagctcctttgttacagaaagcaaacccattccaggttca
gcttctttgccaagaagttaccagaaaaatgatacttcaagattatcttcagtagttacc
cccaggccatttggaattcagtcaaaaggaatcacatcacttccacgatccttaacagtg
gatgatgcttccaagtacaatggaaatcttggttctacaaagaatagttcaacatttaac
tcctactttaaagttgaagagaaacccaacagaactcaaccaagtaaagatgatgaaaag
gaaaacaccagaagaagtacttcacctaaaccattccctgcagtcagcgctgcaggggat
gtcacatcttttgcaagaggggtagaacaaaccaaagttccagggccgctggaccagtac
agtgacctgagaatcagcattaaccagaaacctggaagcagccatgactttgggtttaaa
acaagctggaacagtgctggggtctttgtaaagtctgttgatgtagggagtccagctgaa
ttttgtcagctgcatgtagaagatgaaattctatctctcaatggcacaaaggtatcatca
atggactacaacaagtgggtggaagcaatagatcacgctgtagaaactggaaacctagct
atggatgttaggcgatatggcaagaatgcatggggcagagacccaccttccctaccatac
aaaagccataaaaccctcaatctgaccagtatggatccaaaacttataggttctcctgaa
aataaatggattgatgcaagcagatcacaaagcacctccctgaaaaaagacatccctgac
tctggtaatgcaacaagtcggtttaatggaatacaggactcagcacaaaaagaatctgaa
tctatttctttgaaaaataataaaagaaggtcacagttttttgagcaaggaagttcggat
tcttcattacttgatatgccagttccttcaattaatgtatcaacacgtcggtcttgggat
ccagaagatgaaagaaaacgtcaggaaaagtggcttaaggaacaagaacaaattctgcag
gaaaaatacaaacttgagcaagaaaaactgagacaagagtgggaacgtgctcaaaaggaa
gcagaaaatgagagatttcagcaaattcagcaagaacaggccccctctagcttgcccgta
acatcacagtcatcatactggaaaacatttggctctgaggtatctgatgatgtgcagagc
agtgaagaggaagaccgacaaaaagaaagatcatcagaggaactagaaagtgagagacaa
tggaaaagagcagaagaagaaagattaaaatatttggaagctcaacatcaccaagaggta
gaagaacaaagacgtcgtcagttggaacaagaaaatctgcgtcaccaggcagaagaagaa
aaccgccgtcgccaggctgaggagagtgaaagaaaacgtcaggaggaggaaagaaagaaa
aaggaagaagagatacgttttcacagagctgttgaagaagaaagacggcgtaaaagattc
caagaagaagaggaggagcaaagacaaaagtcagagaaagatgctaggaataatgttgtt
ttaaaatcggatgattctcatacccccggcaatggagatcacactgattctggccctagt
gagagcacaggaagtatgcagcctcgaacatacaaggaaaaatctcaagtttcatcagaa
gtggagaggcagcggatccttcaggaaatgaagaaaaaggcatcgctcaataatgacaat
agctggattaggcagcgcagttctagtatgacaaaggatacgtcatcccttcctaactat
atgagaagaggggaatcgttagataaccttgactccacctcgggtttgcaaagagtgtca
ccttgggcaaatcagtcctcatcttataactcaatgtcatcaagtcaagacttcagtcga
ccttcccaggttgtttccacgtctaatcgtaccttcttgagcaattcatccaatagtttg
ccacagtcttctgctggtccccttaagagtgcctctctttcccaaacccaaacatccaac
cagcaacgcaataagtcagtgagtgggaagaaattgtgctcttactgtaataacagtctg
ggcaaaggagctgccatgatcatcgaatctcttggtctttgttttcatttacagtgtttt
aagtgcactgcatgtgagaccgaccttggaggctctgaatctggagctgaagtccgaatc
cgcaacaatgagctgtactgcaacagctgctacatcagatttaaaatggggcagccaacc
tccatgtga
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