Xenopus laevis (African clawed frog): 100037154
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Entry
100037154 CDS
T01010
Symbol
gigyf1.S
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
100037154 (gigyf1.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100037154 (gigyf1.S)
Surveillance factors
Other surveillance factors
100037154 (gigyf1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
100037154
NCBI-ProteinID:
XP_018095256
Xenbase:
XB-GENE-5911758
UniProt:
A0A8J0TUW2
LinkDB
All DBs
Position
3S:131009067..131023275
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AA seq
997 aa
AA seq
DB search
MAAETLNFGPEWLRALSSGGSVASPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEEM
QDKEFAVIVNEEPLQPLALLPLTEEEQRNFSLSVNSVPVLRLMGKGATTAPASGATRGRG
TTRGRGNGRGRGDSTLYPRPLDEQDSGFGRGGREIHRSQSWEDRGERRFEKPIRREAVHV
GFEESGAPSRKEFARSDSENWRTLREGQEEDEDGNWRLAVTRRDERWRSTSPAASTGEAP
RSAGWRDHGERRRKFDFESGSTPHSGGRTGDSAQEDERDGLPEWCMEDEDDEMGTFDSSG
AFFSFKKSPKETIIEEQELEFLGVEEEEHKAEEGSVRPEDEDSSIAHEDATPEVVVSCSA
PPNLIWGGSLYTDDEEETCPELPSADGEDLVQGEKQQGPGEEGECNAGDPGTFIPLSLSP
PTSSSPPVAATEFSVGDPEEDEGMKHLQQEAEKLVASLQDSSLEEDGFSSTRSHNAAALP
LSHEAAMKWFYKDPQGEIQGPFTTQEMAEWCQAGYFTMSLLVKRGCDEGFQPLGEVIKMW
GRVPFAPGPSPPPLLSNIDQQSLKKQQELALYQQLQHQYLLQVINRQQYPQKTGDLTPQQ
QQQLALFLQQLNPSKSRSSESALLPAMNRSLSVPDTGSLWDLHTSATQTSGGDPALWDLP
GTTASQGPTLEQQLQLHQKLQERRDAELRAKREEEERKRREEKRRQEEQKRREEEEIYRR
KQQSRQQQELLLKLLQQSGQQSPPAAWGSHGKGLSLKAMLEMQEREGQLLKQRGQTSRPG
HGNLGMSNASVLSSQWGAESGSLWGGPEKSLWDDGVKSTSSCRGLRNSRSSPSLTDTYAA
SARRKKTEEEEKLLKLLQGFKPSDGFTQWCEQMLHILNTSNNLDVPTLVAILKELESPYD
VHDYIRSCLGETLEAKEFAKQFLERRAKYKASQRQQLLDTSWLAPSMFPSSQNSKPSAYD
TQSNKMKRRIQMLHSDPSILGYSLHGSPNEMEAIDDY
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagaaaccctaaactttgggcctgaatggctcagagcactatccagtgggggc
tccgtggcctccccacccccctcccccgctatgccaaagtataaacttgctgagtatcgc
tacggacgtgaggagatgttagcactttatatcaaggacaataaggttccagaagaaatg
caggacaaggagtttgctgtgattgtgaatgaggaacccctgcagcctctggctctgctt
ccactcactgaggaggagcagaggaacttctcgttatcggtgaacagtgttccagttctt
agattaatggggaaaggggcaacaacagcaccagccagtggggcaacaagaggcagaggc
accactcgggggagaggtaatgggagaggtcggggagattccactctttacccacgacca
ttagatgagcaagactctgggtttggccgtggtggaagagagattcatcggagtcagagt
tgggaagacagaggagagcggaggtttgagaagccaattcggcgagaggctgttcatgtc
gggtttgaagagtctggtgccccctctcggaaagagtttgcccggtcagacagtgaaaac
tggcgcacgttgcgtgaagggcaagaggaagatgaggatggcaactggagactggctgtg
actaggagagacgagaggtggagatccactagtcctgctgccagcactggagaggctcca
cgttctgctggttggagggatcatggggaacggcgcagaaagtttgactttgaaagcggc
tctactccccattctggtggtcggacaggggacagcgcacaggaagatgagagggacggc
ctccccgagtggtgcatggaagatgaggacgatgagatgggaacgtttgattcctctggg
gctttcttctcttttaagaagagccctaaagagaccatcatagaggaacaagagctggag
ttcctgggagttgaggaagaagagcataaagcagaggagggatctgttaggcctgaggat
gaagattcctccattgcccacgaagatgctactcctgaggttgttgtcagctgttctgct
cctcctaacctgatatggggagggtctttgtatactgatgatgaggaagagacatgccct
gaattgccctctgctgatggagaagatctggtgcagggagagaagcaacagggaccagga
gaggaaggcgagtgtaatgctggtgatcctggaaccttcattcccctgtctctgtcccct
cctacctcctcctcccccccagttgctgctactgaattttctgtgggggatccagaggag
gatgaaggaatgaagcatctccagcaggaggctgagaagctggtggcttccctacaagat
tcctccctggaagaagatggattctcctccactcgctctcataatgctgctgctctccca
ctgtctcatgaagctgcaatgaaatggttctacaaggatccacaaggagagattcagggt
ccattcaccacacaggagatggcagagtggtgccaggctggatacttcaccatgtccctg
ttagtgaaacgaggttgtgacgagggattccagccccttggggaggtcatcaagatgtgg
gggcgtgtcccctttgcacccgggccctcccctcctcccctgctgagtaatattgatcag
cagagtctgaagaagcagcaggaattagctctgtaccagcagctgcagcaccagtatctg
ctccaggtcattaaccggcagcagtacccccaaaagactggagatctgactcctcagcag
cagcagcaattggctcttttcctgcagcagctaaacccttcaaaatccagatcatctgag
tctgctctccttcctgctatgaatagatctctctctgtgccagacactggatccctgtgg
gatctacatacctcagctacgcagacatccggtggggaccctgcactgtgggacctgccc
ggtacaactgcatctcaggggccaacattggaacagcagctgcaactgcatcagaagctg
caggaacgccgagatgccgaactcagggccaagagggaggaggaggagagaaagagaagg
gaggaaaagaggcgccaggaagagcagaagcgacgagaagaagaggagatatacagacgc
aagcagcagtcccgccagcagcaagaactgctcctgaagcttctccagcagagtggccag
caatctccaccagctgcatgggggtctcacgggaagggactgtctcttaaagccatgttg
gagatgcaggagagagaggggcagctactgaagcagagaggacagacatcaaggccaggg
catggaaatttaggaatgtctaatgcttcggttctgtcctctcaatggggggctgagtct
ggctctctttggggtgggcctgaaaagagcctttgggatgacggtgtaaaatctacaagc
agttgcagggggctacgtaacagcaggagcagcccttctctgacagatacatacgctgcc
tctgctcgccggaagaaaaccgaagaggaagagaagcttctgaaacttctgcagggattc
aaaccgtctgacggtttcactcagtggtgtgaacaaatgttacacatcctcaacacctcc
aacaacctggatgtccctacattggtggccattctgaaggagctggagtcgccctacgat
gttcatgattatattcgatcctgcctgggagagactctcgaagccaaagaatttgctaaa
caattccttgaacggagagcaaagtacaaagccagccagaggcagcagcttctggatacc
tcctggctggctccatccatgttcccgtcatcccagaactccaagccaagcgcatatgat
acacaaagcaacaaaatgaagaggaggatccaaatgttacactcagaccccagcatattg
ggttactccctccatggctcccctaatgaaatggaagccattgatgactactga
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