Xenopus laevis (African clawed frog): 100037192
Help
Entry
100037192 CDS
T01010
Symbol
ddx1.L, ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
100037192 (ddx1.L)
03016 Transfer RNA biogenesis [BR:
xla03016
]
100037192 (ddx1.L)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100037192 (ddx1.L)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100037192 (ddx1.L)
Transfer RNA biogenesis [BR:
xla03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
100037192 (ddx1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Motif
Other DBs
NCBI-GeneID:
100037192
NCBI-ProteinID:
NP_001091352
Xenbase:
XB-GENE-969102
UniProt:
A2VD92
A0A974CWJ6
LinkDB
All DBs
Position
5L:151905720..151931739
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKASVKTGSTVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH
GCRSTRGVNKGKYYYEVSCHDQGLCRVGWSTLSASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDNSIVKFSKNGKDLGLAFQIPSHMKNQAFFTSCVLKNAELKF
NFGEEDFKFPPKDGFVALSKAPDGHVVKSQNTGSAQVSQTKSLPNAPKALIIEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAAKEQLTILENGVDIVVGTPGRIDDLISTGKLS
LSQVRFLVLDEADGLLSQGYSDFINRIYGQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKKDKQWEKLAKNHIRTDGVHDKDNTRPGGN
SAEVWSEAIKVLKGEYIVRAIKEHKMDQAIIFCRTKLDCDNMEQYFIQQGGGPDKKGHQF
SCVCLHSDRKPPERKHNLERFKKCEVRFLICTDVAARGIDIRGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVASEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLTCTISQVEPDIKVPLDDFDGKVVYGQRRATGGGLYKGHVDILAPTVQELASLEK
EAQTSFLHLGYLSNQLFRSF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctcagaaatgggggtgatgcccgagattgcccaggctgtggaggaaatg
gattggcttcttcctacagatatccaagcagagtccatacccctgatcctcggtggtggg
gatgtgctgatggctgcagaaactggaagtggaaagactggggctttcagcatccctgtc
atccagattgtttatgaaacacttaaagatcaacaagagggcaagaaaggaaaagcatcc
gttaagactggaagtacagtactaaataaatggcagatgaatccatatgacagaggttca
gcttttgcgattggctcagatggcctttgctgccaaagcagggaaataaaggagtggcat
ggctgcaggtccactcgaggagtaaataaaggaaaatactattatgaagtatcctgtcat
gaccagggtttatgcagagttggatggtctaccctgtcagcctccttagatcttggaact
gataagtttggttttggctttggtggaaccgggaaaaagtcgcacaacaagcaatttgac
aattatggagaggagtttacaatgcacgacaccattggctgttacttagacattgataac
agcatagtaaagttttccaaaaatggtaaggaccttggccttgcatttcagatcccttct
cacatgaagaaccaagctttctttacatcatgtgttctaaagaatgctgaacttaaattc
aattttggagaggaagacttcaaatttcccccaaaggatggatttgtggcactctcaaag
gctccagatggacatgtggtgaaatcacagaacactggaagcgcgcaagtgtctcaaaca
aagagtttaccgaatgcccccaaagcacttatcatcgagccctcccgtgagctggcagag
cagactctaaacaacgtcaagcaatttaaaaaatatgttgacaaccctaaactgagagaa
ttgttgattatcggtggtgttgcagcaaaggaacagttaaccattctcgaaaatggtgtg
gatatagtggtggggacccctggtaggatagatgatcttatatctacagggaaactcagc
ctgtctcaagtccgtttcctggtacttgatgaagctgatggtttactttcacaaggatat
tccgacttcatcaacagaatttatgggcagatccctcagatcacttcagatgggaaaagg
ttacaggtgattgtgtgctccgccacgctgcattcctttgatgtaaagaagctttctgaa
aaaatcatgcatttcccaacatgggtggaccttaaaggagaggattctgtgccagaaact
gtgcatcatgttgttgtgccggtgaatcccaagaaagacaaacagtgggaaaaacttgcc
aaaaatcacattaggactgatggcgtgcatgataaagataacacaaggcctggtggaaat
tccgcagaggtgtggtcagaagctattaaagtattaaaaggagaatacattgtgcgtgcc
atcaaggagcataaaatggaccaagcaattatattctgcagaaccaaattagactgtgat
aacatggagcagtatttcatccaacaaggaggaggacctgataagaaaggacatcagttt
tcatgtgtgtgtcttcatagtgaccggaagccaccagaaaggaaacacaacctggaaaga
tttaagaaatgtgaagttcggttcttgatctgcactgatgttgctgccagaggtattgat
attcgtggagtcccatatgttattaatgttaccctccctgatgagaagcagaactacgtc
catcgcattggtagagtgggccgagctgaaagaatgggtttggccatatctctggtggca
tccgaaaaggagaaggtttggtaccatgtgtgcagcagccgtgggaagggatgttataac
accagactgaaggaagatgggggctgtactatatggtacaatgagatgcagttactgtct
gagattgaagagcatctgacttgcactatatcccaagtagaacctgatataaaagtgccc
ttggatgatttcgatggaaaggtggtgtatgggcagagaagggctaccggaggtggactc
tataagggtcatgtagatattttggccccaactgtgcaagagttggcatctctagaaaaa
gaggctcagacgtccttcctgcacctgggatacctttctaatcagcttttccgaagcttc
taa
DBGET
integrated database retrieval system
