KEGG   Xenopus laevis (African clawed frog): 100049139
Entry
100049139         CDS       T01010                                 
Symbol
larp1b.L, larp2
Name
(RefSeq) uncharacterized protein LOC100049139
  KO
K18757  la-related protein 1
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    100049139 (larp1b.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100049139 (larp1b.L)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 100049139
NCBI-ProteinID: NP_001091436
Xenbase: XB-GENE-17342071
UniProt: A4IFX0
LinkDB
Position
1L:complement(68203344..68228399)
AA seq 934 aa
MSAGVQEVPAGSLASDQVVRNRQQKPDEKNSNKENTKGESSCHVEAPQPKVNPWTKKHSH
VTTSHFGHFRGLQGQQSTAKVIRAGKPPSKKTSDFHDITNWPTPSEIVNHGTKNILAATT
NGEHASKQEKNSDGKTGHNDVHETEENCNMEVQVKNLRPNDQMEATTQKKKYNKHKWMPL
HLEETKTNEQERPAIHKNSGSQCAFSRSQKNKQRNYSWHFDRKDELDEVSSVRSEGGNIR
GRVRCSYSARENRMKTDKMETSKSMMYYYDDGTGMHIYPVDQKLLKEYLKRQIEYYFSTE
NLEKDFFLRRKMDLQGFLPISLIAGFYRVQSLTTDVDLICEALKDSAVVEIVDQKIRRKG
DPEKWPIPSGPSFDLTRTDFSRFIDCPEFIPGKKLESRTGSVPNSPRKECSFLQDGSNRL
SNLQSMPKVLSTSMPELDSEPWIEVKKRHRYSPVKSKEPDIPTQIIPKPQLCDEPDPEDL
DFMFDEELQHMQGRKNKFTDWSDDDSDNEIDDKDLNKIIIVTQTPPHLKKHPGGDRTGNH
ISRAKMTSELAKVINDGLYYYEQDLWMDYEEQNYVPSKQELEHFRKLNLISKEEFDNFAP
EIQVEQNLGQSPPIIPTFKQVCSEDVHESVTTQSHPTDVLQSPISCRVRTPKSPRTPRLK
DPNKTPRFYPVVKEARSIDVKSPRKRKTRHSTNPPLEYHVGWVMDSKEHRPRTSSVSSSN
ASPSEGAPLTGSYGCTPHSLPKFQHPSHELLKENGFTQQVYHKYRRRCLNERKRLGVGQS
PEMNTLYRFWSFFLRDHFNKKMYEEFKQLAVEEAKENYRYGLECLFRFYSYGLERKFRQE
LFKDFQEETIRDYEHGQLYGLEKFWAYLKYSQIKNLSVDPKLQSYLSKFKRLEDFRVDPP
IAEEDGRIPSASNEDTSRRRHRSGSSKPTLASKH
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgtcggctggggtacaggaggtacctgcagggtcccttgcctctgatcaggtggtgagg
aacaggcaacagaaacctgacgagaagaacagcaacaaggagaatactaaaggggagtca
tcgtgtcatgttgaggccccccaaccgaaagtcaatccatggactaagaagcacagccat
gttacaaccagtcattttggtcatttccgtggccttcagggacaacaaagcacagcaaaa
gtgattagagccggaaaacctccatcaaagaagactagcgactttcatgacattacaaat
tggccaacaccaagtgaaatcgtaaaccatggaaccaaaaacattctggctgctacaaca
aacggagaacatgcaagcaaacaagagaagaacagtgatgggaagactggtcataatgat
gtccacgaaacagaggagaactgcaatatggaagtacaagttaaaaatttaagacccaat
gaccagatggaggctactactcaaaagaaaaaatacaacaagcataaatggatgccattg
catttagaggagacaaaaacaaatgaacaagaaaggccagcaatccataaaaactcaggt
tctcagtgtgcgtttagcagaagccagaaaaacaaacagagaaattacagctggcatttt
gatcggaaggatgagttagatgaagtttcgagtgtacggagtgaaggaggaaacatcaga
ggaagagtgcgctgttcatatagtgccagagagaacagaatgaagacagacaaaatggaa
acttctaaaagtatgatgtactattacgatgatggaactgggatgcatatttatcctgta
gatcaaaaattgcttaaggaataccttaagcgccaaatcgagtattactttagcacggag
aacttggaaaaagacttctttctcaggcgaaagatggacctgcagggatttttgccaatt
tctcttattgctggtttctatcgtgtgcagtctttgaccacagatgtcgatctcatctgt
gaggcattgaaagacagtgccgtggtagaaatagtagatcagaagataagaagaaaaggg
gatcctgaaaaatggccaatcccaagtggtccttcttttgacttgacgcgtaccgacttc
tctagattcatcgactgtccagaatttatacctgggaagaaactggagtctcgtacaggt
tctgtaccgaattctccaaggaaagaatgttcttttttgcaggatggaagtaacaggcta
agtaatttacaaagtatgcccaaagtcctctccacaagcatgccagagctggactctgag
ccttggatagaagttaaaaaaagacaccgttactcccctgtcaaatcaaaggagcctgat
attcccacacaaataattccaaaaccccagctgtgtgatgaacctgacccagaggatttg
gatttcatgtttgatgaagagctgcagcatatgcaagggcgtaaaaacaaatttacggac
tggtctgatgatgactctgataatgaaatagatgacaaagaccttaataagatcataatt
gttacacaaacacctcctcatctaaaaaaacaccctggaggtgaccgtacgggaaatcat
atatctcgagcaaagatgacttctgaattggccaaggtcattaatgatggactttattat
tatgagcaagacttgtggatggactatgaggaacagaattatgtgccctcaaagcaagag
ctagaacattttaggaaactgaatcttatcagcaaagaagagtttgacaactttgcacca
gaaattcaggttgagcaaaatcttgggcaatccccgccgatcatacctacttttaaacaa
gtttgcagtgaggatgttcacgaatctgtgactacacaatcccacccaacagatgtacta
caatcaccaatatcttgtcgtgtaagaacaccaaaatctcctcgtactccacgcttgaaa
gatccaaataaaacaccaagattttatcctgtggttaaagaagcaaggtctattgatgta
aagagtccaagaaagcggaaaactcggcatagtactaatcccccgctagagtaccatgtt
ggttgggtaatggattctaaggaacatcgaccacggacttcctctgtcagcagctcaaat
gcttctccatcagaaggtgctccccttacaggaagctatggctgcaccccccactctttg
ccaaagtttcaacatccttcacacgaactattgaaagaaaatggttttacacagcaagtg
taccataaatatcgccgtagatgcttaaatgagaggaaaagactaggagtaggccaatcc
ccagagatgaacacattgtatcgcttctggtctttctttctcagagatcactttaacaag
aaaatgtatgaggagtttaaacaacttgctgtggaggaagcaaaggaaaactacaggtat
ggcttggaatgtctattcaggttttacagctatggactggaaaggaagttccggcaagaa
ttatttaaggacttccaggaagaaactattcgtgattatgaacacggtcagctttatggg
ctggagaagttttgggcatatctgaaatactcacaaatcaagaacctgtcagtggaccca
aaattacaaagctacctcagcaaatttaagaggcttgaagacttcagagtagatcctcca
atcgctgaagaggacgggagaataccttcagcatcaaatgaggatacatcccgtcggaga
catcgctcaggttcatccaagccaactcttgcttcaaagcattaa

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