Xenopus laevis (African clawed frog): 100101303
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Entry
100101303 CDS
T01010
Symbol
rnf220.1.L
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220 isoform X2
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
100101303 (rnf220.1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100101303 (rnf220.1.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100101303 (rnf220.1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4
Pox_A_type_inc
Rad50_zn_hook
Endonuclease_7
DUF4428
Motif
Other DBs
NCBI-GeneID:
100101303
NCBI-ProteinID:
XP_018113840
Xenbase:
XB-GENE-865514
UniProt:
A0A8J0V171
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All DBs
Position
4L:complement(86127218..86292716)
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AA seq
588 aa
AA seq
DB search
MDLHRAAFKMENSSFLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSMDKEVHI
PFTNGSYTFASMYHRQGGVPGAFPNRDFPPSLLHLHPQFAPPNLDCSPISMLNHSGVGAF
RPFTSPEERESYQSAFTPAKRLKSCHDTESPHLRFSDAEGKEYEFGAQIPTGSPVGLKVD
DAGKKLFAVSGLISDRETSSSPEDRNDRCKKKVALFDSQAPICPICQVLLRPGELQEHME
QELDKLTQLNISKNSLQKEIMAPCTPKSVLLSASIKREGESPTVSPHSTEDIHHSDRYQT
FLRVRANRQTRLNARIGKMKRRKQDDGQVCPLCSQPLSGSEEEMSRHVELCLAKRETCMN
EDDSVDIENENGNRFEEYEWCGQKRIRATTLLEGGFRGSGFVMCGSKENHDSDADLDVDG
DDTLEYGKAQYTEADIIPCTGEEPGEAKEREALRGAVLNGGTPSTRITTEFSKWASDEMP
STSNGESSKQETMQKTCKNSEIEKITEESAVTTFEALKARIRELERQLSRGDRYKCLICM
DSYTMPLTSIQCWHVHCEECWLRTLGAKKLCPQCNTITSPGDLRRVYL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcaccgtgctgcttttaaaatggagaactcttccttcttgcctaatcctttg
gcctctccagcgctaatggttttggcatcaactgctgaagccagtcgagatgcttccata
ccatgccaacagccacgtccttttggtgtgccagtctcaatggataaggaagtccatata
cctttcactaatggttcctatacttttgcttcaatgtaccatcgccagggtggtgtgcca
ggggccttccctaatcgtgacttcccaccttccctacttcacctccatccacagtttgcc
cctcccaatttagactgctccccaatcagtatgctaaaccatagtggtgttggtgctttc
cggccttttacctcccctgaggagcgggagagctatcaatctgcgttcaccccagccaag
cgtctaaagagctgtcatgacacagagtctccacatctgcgattctccgatgccgagggt
aaagaatatgagtttggggctcagatccccacaggctccccagtggggctcaaagtggac
gatgcaggaaaaaaactttttgcagtgtccggcctgatttcagacagagagacatcctca
agcccagaggaccggaatgataggtgcaaaaagaaggttgccctgtttgatagccaagcc
ccaatctgccctatatgccaagtcctactacgcccaggagagctgcaggaacacatggag
caggaattggataaacttactcaattaaatatcagtaagaattccttgcagaaagaaatc
atggctccatgcacaccaaagtcagttttgttatcagcttcaatcaagcgagaaggggaa
tctccaacagtgtcacctcactccacagaggatattcaccactcggacagatatcagacc
tttctgagagtgagagccaatagacaaaccagacttaatgctcggattggaaaaatgaaa
cgaaggaagcaagatgacgggcaggtatgtccactatgcagtcagccactctctggatcg
gaggaggagatgagtagacatgtggaactgtgccttgctaagagagaaacctgcatgaat
gaggatgattctgttgatattgagaatgagaatggaaacagatttgaggaatatgaatgg
tgtggacagaaaaggatacgagccacaacacttctggaagggggatttcgtggttctggg
tttgttatgtgtggcagcaaagaaaaccatgatagtgatgctgatttagatgttgatggg
gacgacactctggaatatggaaaggcgcaatatacagaagcagatattattccatgtaca
ggagaggaacctggagaagccaaagaaagagaagctcttcgaggagcagttttaaatggt
ggaacaccaagcaccaggataacgaccgaattctctaaatgggcgagtgatgaaatgcca
tcaacaagtaacggcgagagtagtaaacaggaaacaatgcagaaaacatgcaaaaacagt
gaaattgaaaagatcacagaagaatctgcagtcacaacgtttgaagcactaaaagcacgt
atccgtgagttagaaagacagctctcccgaggggaccgctacaaatgcctcatttgcatg
gattcctacacaatgcccctgacatctattcagtgctggcatgttcactgtgaagaatgc
tggctgcgcactctgggcgctaagaagctctgcccacagtgtaataccatcacatcacct
ggagacttgagacgtgtgtacttgtga
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