Xenopus laevis (African clawed frog): 100125229
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Entry
100125229 CDS
T01010
Symbol
colgalt1.L, colgalt1, colgalt1-a, glt25d1, glt25d1-a, glt25d1b
Name
(RefSeq) procollagen galactosyltransferase 1-A precursor
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00310
Lysine degradation
xla00514
Other types of O-glycan biosynthesis
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100125229 (colgalt1.L)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100125229 (colgalt1.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xla01003
]
100125229 (colgalt1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
100125229 (colgalt1.L)
Glycosyltransferases [BR:
xla01003
]
O-Glycan biosynthesis
O-linked Gal type
100125229 (colgalt1.L)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
100125229
NCBI-ProteinID:
NP_001096660
Xenbase:
XB-GENE-952958
UniProt:
A0JPH3
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Position
3L:complement(144824414..144847946)
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AA seq
611 aa
AA seq
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MSQAGVDRLLRGLQLLLLVLRLSAGYFPEERWNPESSLRNPTVLIALLARNSEGSLPEVL
GALDTLHYPKERISLWVATDHNLDNTTEILREWLINVQNQYHHVEWRPQEHPRWFKDEEG
PKHWSHSRYEYIMKLRQAALTSAREMWADYIFFLDADNLLTNPETLNLLIAENKTVVAPM
LDSRAAYSNFWCGMTTQGYYRRTPAYMPIRRRERRGCFPVPMVHSTFLIDLRKEASQQLN
FYPPHADYTWAFDDIIVFAFSCRQADVQMFLCNKEIYGHLPVPLRSHGTLLDEADNFVHT
KLEVMVKGPPLNLSSFVTIPEKVPDKMSFDEVFLINLKHRQDRRERMKRTLYELQIDYKL
VDAVYGKTLNQTQVSELGIKMLPDYKDPYHGRPLTRGEMGCFLSHYNIWKEISERNLAVS
AVFEDDLRFEIYFKRRLQTLLHDLETAKLDWDLIYLGRKRMQVDEPEEPVPGVRNLVVSD
YSYWTLGYLISLRGAKKLLNAEPLVKMLPVDEFLPVMYDKHPISDYSSHFSPRDLLAFSV
EPLLLYPTHYTGDEGYISDTETSVLWDNLTEPTDWDRAKSRKTQQQEKLRSEALNSPSLG
SPFDNTARDEL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggccggtgtcgatcggctcctgagggggctccagctattgctgctcgtgttg
cggctcagcgccggctacttcccggaagaacgatggaatccggaatcttcgctccgcaat
ccgaccgtcctgatcgccctgttagcccggaactccgagggttcccttccagaagtgctg
ggagcgctggacacgctgcactacccgaaggagcggatctctttatgggttgccacagat
cataatttggacaacaccaccgagatcttgcgggaatggctgatcaatgtgcagaatcag
tatcatcacgtggagtggagacctcaggagcacccgaggtggttcaaggacgaggaaggc
cccaagcattggtcgcattcccggtacgaatatatcatgaaactacgacaggcggctcta
acctctgcccgagagatgtgggctgattacatttttttcctggatgcagataacttgctg
acaaatcccgagactctgaatcttcttatcgcggagaacaagactgtagtggcccccatg
ctagattccagagctgcgtattctaatttctggtgtggcatgacaacacagggttattac
cggcgcacccccgcatatatgccaatccgccgaagagagcgccggggttgcttccccgtc
cccatggttcactctacgtttctgatagaccttcgtaaggaggcttcccagcagctgaac
ttctacccacctcacgccgactacacgtgggcattcgatgacatcatcgtgtttgcattt
tcctgcaggcaggcagacgtacagatgttcctttgtaataaagagatctatgggcatttg
ccagtccctctccgctctcacgggactctcttggatgaagctgacaactttgttcacacc
aagctggaagttatggtgaagggccccccgctgaatctatcaagctttgtgaccatacct
gagaaagtcccagacaagatgtcttttgatgaggtcttcctcattaacctgaagcatcgg
caggacaggagggaacgcatgaagaggacactgtacgagctccagatagactataagctg
gtagacgccgtgtatggaaagaccctgaatcaaacccaggtctctgaattgggcataaag
atgctccctgactacaaagacccttaccatggccgccctctgactcgcggagagatgggc
tgttttctcagtcactacaacatctggaaggagatctccgagcgcaacttggcggtttca
gcagtgttcgaggatgaccttcgttttgagatctactttaagcggcggctgcagacgctc
ctgcatgatctagagacagccaagctggactgggacctcatttacctgggcaggaagagg
atgcaggttgacgaaccagaagagcctgtgcctggagtccgtaatttggtggtatccgat
tattcctattggaccctggggtatctgatctccttgcgtggggcaaaaaagctgctgaat
gcagaacctcttgtgaagatgctgcctgtagacgagttcttgccagtcatgtatgacaag
caccccatctctgactattcctcccatttctcccctcgagaccttctggctttctcagtg
gagcctctccttctgtatcccacccactacactggagatgagggctacattagtgacacg
gagacctcggtgctgtgggacaatctgacggaacccaccgactgggaccgagcaaagtcg
cgcaagacacaacagcaggagaagctgcgcagcgaggccttaaactccccttccttgggc
tccccttttgacaacactgcccgggatgaattatga
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