Xenopus laevis (African clawed frog): 100125665
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Entry
100125665 CDS
T01010
Symbol
capn3.L, canp3, canpl3, capn3, lgmd2, lgmd2a, ncl-1
Name
(RefSeq) calpain 3 L homeolog
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100125665 (capn3.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
100125665 (capn3.L)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
100125665 (capn3.L)
Peptidases and inhibitors [BR:
xla01002
]
Cysteine peptidases
Family C2: calpain family
100125665 (capn3.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calpain_III
Calpain_u2
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
EH
Lipase_GDSL_3
HP0268
Motif
Other DBs
NCBI-GeneID:
100125665
NCBI-ProteinID:
NP_001098739
Xenbase:
XB-GENE-5875757
UniProt:
Q0IH17
LinkDB
All DBs
Position
8L:101363527..101445922
Genome browser
AA seq
306 aa
AA seq
DB search
MHGNNQHLAKDFFLYNASKAKCKTYINMREVCQRFRLPPSEYVIIPSTYEPHQEGEFILR
VFSEKRNISEEVEYKIEAEKTIKKKKKAKPIIFVSDRSNSNKELTVDGATDEDQKKLNAD
QKDKTSVSTDTETEEEKQFRNIFQQIAGDDMEISADELQSVLNNVVNKHKTLKSNGFSLE
SCRSMIALMDTDGCGRLNLQEFFHLWQKIKQWQKIFLRFDSDQSGTISSFEMRNAVNEAG
FRLNSQLYDIITMRYANKRMDIDFDSFICCFVRLEGMFRAFHAFDKDGDGIIKLNVLEWL
QLTVYA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcatggcaacaatcagcacctggcaaaggatttcttcctctacaatgcctccaaagcc
aagtgtaaaacctacatcaacatgagagaagtctgccagcgtttccgattgcccccaagt
gaatatgtcattatcccctctacctacgagccccaccaggaaggagagttcattttaagg
gttttctctgagaaaagaaatatttcggaagaagttgaatacaagatcgaagcagaaaaa
acaattaaaaagaaaaagaaagccaagcctatcatctttgtgtcggacagatcaaacagc
aataaagagttgaccgtggatggcgccactgatgaagaccagaaaaaattgaacgcagat
caaaaagataagacctccgttagtacagacacagagaccgaggaagaaaagcagtttagg
aatatcttccaacagatcgcaggggatgacatggaaattagtgctgatgagcttcaaagt
gtcctgaacaatgtagttaacaaacataaaaccctgaaatccaatggattcagcctagag
tcatgccgcagcatgattgcgcttatggatactgatggctgcgggaggctcaacctgcaa
gaattctttcacctctggcaaaagatcaaacagtggcagaaaatcttcttgcgttttgat
tctgaccagtcggggaccatcagtagctttgagatgcgaaatgccgtcaatgaagctggt
ttccgtctgaacagtcagctgtatgacattatcacaatgcgttatgccaataagagaatg
gacattgactttgacagtttcatctgctgctttgtgcgcctggaaggaatgttcagggca
ttccatgcgtttgacaaagatggagatggtatcattaagctgaatgtgctggagtggctg
cagcttaccgtgtatgcttag
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