Xenopus laevis (African clawed frog): 100127255
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Entry
100127255 CDS
T01010
Symbol
cacnb1.S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-1 isoform X1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04260
Cardiac muscle contraction
xla04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100127255 (cacnb1.S)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
100127255 (cacnb1.S)
04261 Adrenergic signaling in cardiomyocytes
100127255 (cacnb1.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
100127255 (cacnb1.S)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100127255 (cacnb1.S)
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GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
Motif
Other DBs
NCBI-GeneID:
100127255
NCBI-ProteinID:
XP_018093485
Xenbase:
XB-GENE-17340908
UniProt:
A0A1L8EKT8
A0A974BSL5
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Position
9_10S:2242062..2266287
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AA seq
640 aa
AA seq
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MFVSLPIPQTQLNIPTPRLQRLQDSCNLSLTLHIDLSEEGSRMSAPEPPPEVASIPRPPP
RIQRLVLGSAESYTSRPSDSDVSLEEDREALRKEEERHALAQLEKAKTKPVAFAVRTNVG
YSPSPGDDAPVQGMCINFDPKDFLHIKEKYNNDWWIGRAVREGCEVGFIPSPVKLEHMRL
LQEQKLRQSRLSSSKSIGNSNSLGDVVSGTRRPTPPATGPLDSPLVYDIDHVDLEYEDTE
AQGAQGAQRSPLNSTGSVTTPPSTTKRVPFFKKTEHIPPYDVVPSMRPIILVGPSLKGYE
VTDMMQKALFDFLKHRFDGRISITRVTADISLAKRSVLNNPSKHNIMERSNTRSSLAEVQ
SEIERIFELARTLQLVALDADTINHPAQLAKTSLAPIIVYIKIASPKVLHRLIKSRGKSQ
AKHLNVQMVAADKLAQCPPEMFDIILDENQLEDACEHLAEYLEAYWKSTHPASINPPNPL
LNRTLATAALASSPAPVSNLQGSYLVHGELRSDGADQMGIYEGQLRRGQMGSRILSRHDT
LESETQGSRDSAYTEPGDSCMDIETDPYEDLEPKSQGRETRRLQRQGSWEELGPDQENLL
QRRRRESPRPQGKGREQYWHEGDGRNRSQLDSWGRDVCIR
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgtcccttcctatccctcaaacacagctaaatatacccacacccaggttgcaa
aggctgcaggattcctgtaacctgagccttacgctccacatagacctctccgaggagggg
agcagaatgtctgctccagagcctccaccagaggttgcctccatcccgagacccccaccc
cgaatccagagacttgtcttgggttctgcagagtcatacaccagtcgcccgtcggactcg
gacgtgtctcttgaggaggatcgagaagccttgaggaaggaggaagagcgacatgctttg
gcacagttggaaaaagcaaagacaaaaccggtggcctttgcagttcggacaaatgtggga
tacagcccgtcccccggggatgatgcgcccgtgcagggaatgtgcatcaactttgatccc
aaagacttccttcacatcaaggagaaatataacaatgactggtggattggtcgtgccgtg
cgagaaggctgtgaagttggatttatcccaagtcctgtgaagttagagcacatgagactt
cttcaggaacagaagctgcgacagagccgactaagctccagtaaatccatcggtaattcc
aacagtttaggtgatgtggttagtgggacccgcagacctacacccccagctacaggtcct
ctggactcccccttagtttatgatatagatcacgttgatttagagtatgaggacacagaa
gctcaaggggctcaaggggctcagcgctcccccctcaacagcacagggagcgtcaccact
cctccatccactaccaaacgggtccctttctttaagaagacagagcacatccccccttat
gatgttgttccatccatgaggccgatcattctagtgggaccatcattaaagggatatgag
gtcacggatatgatgcagaaagctttgtttgatttcttgaagcaccgatttgatgggagg
atttccattactcgggttactgctgatatttctttggccaaacgatcagtcctgaacaac
ccaagcaaacacaatattatggagcgctccaacacacgctctagtcttgctgaggtacag
agtgagattgagcgcatctttgagctggctcgaaccctacagctagttgccttggacgca
gacactatcaaccacccagcccaacttgctaaaacctccttggcacccattattgtctac
attaagatcgcttctccaaaggttttacaccggctgatcaaatccaggggaaagtcccag
gcgaagcatttgaatgtacagatggtggcagctgataaactggcacagtgccctccggaa
atgtttgacatcattctggatgagaaccaactggaggacgcatgtgaacacctggcagag
tacctagaagcctactggaagtccactcatccagccagcatcaacccacccaatccactg
cttaaccgtacccttgccactgcagccctggcatccagccccgctcctgtctccaacctc
cagggttcctacttggtacatggggagctgaggtcggatggagctgaccagatgggcatt
tacgaggggcaactacggagaggtcagatgggttctcgcatcctttcccggcatgacaca
ctagagtcggaaacgcagggcagtcgggactctgcctacacagagccaggtgattcctgt
atggacatagagactgacccttacgaggacttggagcccaagagccaaggaagagaaacc
aggaggcttcaacgtcagggctcttgggaggagctgggtccagatcaagagaacctactg
cagaggagaaggagggaatctccaaggccgcaggggaaaggcagggagcagtactggcat
gagggtgatggcaggaacaggagtcagctggacagctgggggagagatgtgtgtatccgt
tag
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