Xenopus laevis (African clawed frog): 100127292
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Entry
100127292 CDS
T01010
Symbol
rnf20.L, rnf20
Name
(RefSeq) ring finger protein 20 L homeolog
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
100127292 (rnf20.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100127292 (rnf20.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
100127292 (rnf20.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
Strep_SA_rep
HisK-N-like
TolA_bind_tri
zf-RING_5
CSTF2_hinge
zf-rbx1
zf-RING_2
zf-RING_UBOX
Toxin_SdpC
Motif
Other DBs
NCBI-GeneID:
100127292
NCBI-ProteinID:
NP_001106332
Xenbase:
XB-GENE-5746958
UniProt:
A9JS25
A0A974HBV2
LinkDB
All DBs
Position
7L:63717161..63772592
Genome browser
AA seq
965 aa
AA seq
DB search
MSGPGSKRVAGDVGSLGPPEKKAAVEDSGTTVETIKLGSVSSTEEQDLRTLQLKNKKLAG
MLDQRQAIEDELRDRIETLERRQATDDASLLIVNRYWSQFDENIGILLGRYDLDQDLGEF
LTERKALVLPEPEPDSDSNPERKENERGEGLWEAPLSFLATLASSSSEEIESQLQERVES
SRRAVSRIVLVYDRLHDQLDHLSKKLNSTDPSQMEEAIRDLNSMLSNENVRLQEISNLLQ
EKQQNMSQEFLQMQSRLESAESRVLVLDGHIEDLQWDIDKIRKREQRLNRHLSEVLERVN
SKGYKVYGAGSSLYGGTITINSRKFEEMTSEVDLNKELAVNRLQELEKLRQDLQEVTSEN
QELQAELASAVEENVRLSPEYRCMQSQFSVLYNESLQLKTQLDEARSLLHGTRSNHQRQL
ELIERDEISLQKKVRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLI
SSLQNHNHQLKGEVLRYKRRLREIQGDISKMRSRSSSSLFLLPSQSSTEETREETAEIKT
EPEDTFANAPAPPQPEIVPKREEEEVQPPLQQPQRDRRERERERERDRGREKERGDSSKE
KPKHEADTKRKDADTVKQMKADLKRVQESLRDMKLLLDMYRSAPKEQRDKVQLMAAERKS
KAELEELRLRLRELEERERRDSKKMADEDALRRMRAAEEQTEVLQKRLSVAKQEEEALLS
EMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLT
LRTQVDAQLQVLRKLEEKEHLLQTSINTGEKELTLRTQALDLCKRKATESSQQAEELRSQ
LELSQKKLQDLRGEIIENTASREKDAFNYKRAQEDISRLRKKLESTKKPDLVPTCDKILM
EEIKEYKARLTCPCCNSRKMDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFH
RIYIG
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggcctggaagcaagcgcgtggcgggggatgtaggttctttaggaccccctgaa
aagaaggctgcagtggaagattctggaaccaccgtagagacgattaaactaggaagcgtc
tcttcaacggaggagcaggatttgcggacccttcaactgaaaaataagaagttggctgga
atgttagaccagagacaggccatagaagatgaactgcgagatcgtattgagactttagaa
agacggcaagcaacagatgatgcttctctcctcatcgtaaaccgatattggagtcagttt
gatgaaaatattggcattctcttgggtcgttatgacttggatcaagacttgggggagttt
ctgacagaacgcaaagcattggttcttccagagccagagccagactctgacagtaatcca
gaacgcaaggaaaatgaaaggggtgaaggactctgggaagctcctctttcttttttggcc
actttggccagcagcagcagtgaagaaattgaatcgcagctacaagaacgtgtagaatct
tcacgccgtgcagtctctcgtattgttcttgtgtatgaccgactgcatgaccagctggac
catctttctaagaaactgaacagcactgatccatctcagatggaagaggccatcagggat
ttaaactccatgctctcaaatgagaatgttcggctgcaggagattagtaacttgttgcaa
gagaaacagcagaatatgtcccaagagtttcttcagatgcagtcacgattagagagtgct
gaatctcgagttttagttctagatggtcacattgaagatctgcagtgggatattgataag
attcggaaaagggaacagcgtttaaacagacatttatctgaagttcttgagagggtaaac
tcaaaaggctataaagtttatggagcaggaagcagtctctatgggggaacaatcactata
aactcacgcaagtttgaagaaatgacctctgaagttgatttaaataaagagctggctgta
aatagactgcaagagcttgaaaaactgaggcaggatttacaagaagtcacttcagaaaac
caggaactacaggctgagttagccagtgcagttgaagagaatgtgcggttgtctccggag
tatcgttgcatgcagtctcaattctctgtattgtacaatgagtcattacagctaaagact
cagcttgatgaggctcgttctcttctacatggaacacggtccaatcatcagcgccagcta
gagcttattgagcgtgatgaaatatccctccagaaaaaagtacgcactgaagttatccag
ttggaggacacccttgctcaggtgcgcaaagaatatgaaatgctgaggatagaatttgag
cagaccctggcagcgaatgagcaagcagggccaattaaccgagaaatgagacatttaatc
agtagtctgcagaatcataatcatcaacttaaaggagaggtgttacggtataagagacgt
ctgagagagatccaaggggatataagcaaaatgcgttctcgcagtagcagtagtcttttc
cttctgccatcgcagtccagcactgaggagactcgtgaagagacagctgaaatcaagact
gaacctgaagatacattcgcaaatgctcctgctcctcctcagccagagattgttccaaag
agggaggaggaggaggtacagccaccactgcaacaaccacaacgggatagaagagagagg
gaaagggaacgtgaaagagaccgtggaagagaaaaagagagaggtgattcttcaaaggag
aaaccaaagcatgaggcagacaccaagcgcaaggacgcagatacagtcaaacagatgaag
gcagacctaaagcgagtacaggagtctctgcgagacatgaaacttctgttggatatgtat
agatcagcaccaaaggaacaaagagacaaagtacagctgatggcagctgagagaaaaagt
aaagcggagctggaggagcttcgtcttcgtctaagagagctggaagaaagggaacgcaga
gacagcaagaaaatggcagatgaagatgccttacgtagaatgagagcagctgaggaacag
acggaggttcttcaaaaacgactatcagtggctaagcaggaggaagaggccttgctttca
gaaatggatgtcacaggtcaggcatttgaagacatgcaggagcaaaatatccgtcttatg
cagcaactgagagagaaggatgatgcaaactttaaacttatgtctgagagaatcaaatca
aaccagatccataagctgctcaaggaagaaaaggaggagctggcagaccaactacttaca
ctgcgcacacaggtggatgcccagcttcaggttttaaggaagctggaagagaaggaacat
ttacttcagactagtatcaacacgggagagaaagaacttactctcagaacccaggccctg
gatctgtgcaagcgtaaggctacagagtcctctcagcaagcggaagaactgagatctcag
ctggagctgtctcaaaagaagctgcaagatctgcgaggggaaataattgagaatactgca
agtcgagagaaggatgcatttaattacaaaagagctcaggaagatatctctcgccttcga
aagaaattagaatctacaaagaaacctgatctggtgccaacttgtgataagattttgatg
gaggaaatcaaagaatacaaggccagacttacatgcccgtgctgcaactctcgtaagatg
gatgccgttctgacaaaatgttttcatgtgttctgcttcgagtgtgttaagactcgctat
gacacaaggcagcgaaaatgtcccaagtgcaatgcagcttttggagcaaatgacttccat
cggatctacattgggtga
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integrated database retrieval system
