Xenopus laevis (African clawed frog): 100127343
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Entry
100127343 CDS
T01010
Symbol
scrib.S
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100127343 (scrib.S)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_4
PDZ_2
LRR_1
Motif
Other DBs
NCBI-GeneID:
100127343
NCBI-ProteinID:
XP_041423996
Xenbase:
XB-GENE-1018504
UniProt:
A0A8J1L375
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Position
6S:complement(136721670..136788397)
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AA seq
1898 aa
AA seq
DB search
MLKCMPLWRCNGQVESVDKRHCSLLSVPGDIYRYSRSLEELLLDANQLRELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPDLPESIKFCRSLEIADFSGNPLSRL
PDGFTQLRSLAHLSLNDVSLLTLPSDIGNLSNLISLELRENLLKSVPTSLSFLVKLEQLD
LGSNDLQVLPDTLGALPNLRELWLDRNQLSTLPSELGNLRRLVCLDVSENKLEHLPAEIS
GLMSLTDLLLSQNLLSSLPSSLGQLKQLSILKVDQNRLNQLTESIGDCENLSEIILTENL
LTVLPKSMGNLTKLTNLNVDRNRLISLPCEIGGCASLSVLSLRDNQLSTLPPELAGATEL
HVLDVVGNRLLNLPFALTNLNLKALWLAENQSQPMLKFQTEDDEKSGSKVLTCYLLPQQP
SPSLENLQNSVEESWTDGNRNRVSVIQFLEEPNMEEEDDEAAEERRGLQRRATPHPSELK
VMKKAMEGLRGDSNTPKEETGSPRDEDKRLSGLSRQSAESQRSGSTVSVGFQEEQQNRQT
EKLTKQVLEEEEVMGNDMEVWYTEPTVQFADKTTVLCDDDYEDYDEDRASPVERRLIRKD
TPHYKKHAKITKLPNDEVVEALLHGFSPRSLSEEGEEGENGPFPRFSLPNEEEDDEVAPD
KDWEAAGSRDDRFNSQQNIKGVSFDQVNNLLIEPARIEEEELTLSILRQTGGLGISIAGG
IGSTPYKGNDEGIFISRVAEEGPAACAGVRVGDKLLEVNGVDLHNAEHHTAVEALRSSGS
SVSMTVLRERMVEPENPITMTPLRPEDDYNPRERLSVVPYLEENEEEPQRPCQRITSCLA
RNDKGLGFSIAGGVGSTPYRAGETGIFISRIVEGGSAHRDGTLRVGDRVISINEVNMTEA
RQDQAVALLTSTSPTITLLVERETPQSGAPTDPGASPSLHRARPRSPPPPTDGDNGEGDD
WGAPLSNHFSQKMDDEVPIEEIVLVKSGGPLGLSIVGGSDHSSHPFGVREPGVFISKVIP
HGLAARSGLRVGDRILEAAGLDLRHVTHQEAVNALLCNTQELHLLVRRDPPPPGMQEICV
VKAPGEKLGISIRGGARGHPGNPLDPSDEGVFISKVSSSGAAARDGQLTVGMRILEVNQQ
SLLGMTHTEAVQSLRGVGDTLLILVCDGFNPIAETSSQASPGIIANPFAADIGRKNSMES
ISSIDRDMSPEEMERIQKEMEMVREATQWEREDMEKVERMRREREEATRLLEEETKNYSL
EPQKLDYKTPAALPAGGQDKGAWLPLGMESSSSSPVPVALVHPVSAVVANEPTLHPVSPV
ESPLPTIQPSPVAEPGAPVSSAEADEVLVDCQPLRFSENPFIVANKKRAGASGASLSGPP
TGYGSAGELKTTVYYKKTPPGDPSVATAKKEAACSPSNQQASINFLTQEESRPTQPGVIK
SLPLVHVTHVSPLNSSRQQHRTPQSPAPPLIPEDGFSTNAKQAYKTYAALPSTHPSLEQQ
DPGTPPTPDWTSTNIDQFSPGGLDSPEQRSFRDRQKYFEMDVKQQAEKPPKRVSLVGEDD
LRKMKEEEARRIQMKREQLLREEEEGSAGDASPHTRGPTTPTSVFIEGVEYKMERVDGGS
LSSLTGFSPSESQRNSLEDSLRTEQRPNSMSGLTPVYPGGLESVPPVRTVKAEKRLQERL
RMQSPELTEQEKQLSPVERRALQAEKRAMWRAASNMEDSIKQYELSLARKLYQSRQNKPQ
IPEERGRMKSLEQDALKAQMMIAHSKDSRKCSTLDQLAESPSPAPTPSPTPLEDYSPRLL
TSPGRLSHSDKKFDYRQFAAIPSSKPVYEIQSPELTPNLKCPEDSRTSVTCSLEHVQQEE
EEHEGEPAPNTSALEEMATYNKRKLQHTRRSLETAAPT
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtgcatgccgctgtggaggtgcaatggtcaggtggagtcggtggataagcgt
cactgctcgctgctgtctgtaccgggtgatatatatcgctacagtcgcagtctggaggag
cttctattggatgccaaccaactgcgggagttgcccaagcctttctttcgccttctgaat
ttgagaaaactgggcctgagtgacaatgagatccagcgcttgccccccgaggtggccaac
ttcatgcaactggtggagctggacattagccgcaacgacattcctgacctcccagaaagc
atcaagttctgcaggtccctggagattgctgattttagtgggaaccccctgtccaggctg
cccgatggcttcactcagctgcggagtctcgctcacctttccctcaatgacgtctcctta
ctgaccctgcccagtgatattggaaacttgtccaacctcatctcattggaactacgggaa
aacctcctgaaatctgtgcccacgtccctctcattccttgttaaactggagcagttggat
ctgggaagcaacgacctgcaggttctgcctgacacactgggtgccttaccaaatctgcgt
gagctgtggctggacaggaaccagctctctactttgccctcggagctggggaatctgcgg
cggttggtttgcttggatgtgtctgagaataaactggaacatctcccggcagagataagt
ggtctgatgtccctcacggacctgctgctctcacagaacctgctcagctcccttccctcc
agccttggtcagctcaagcagctgtctatcctaaaggtggatcagaatcgtctgaatcag
ttaacggagtctattggcgactgtgagaatcttagtgagattatcctgactgagaacctg
ctgacggtgcttcctaaatccatggggaatctcaccaagctgacaaatctcaatgttgat
cggaacagactgatctcccttccatgtgaaattgggggctgtgccagtctcagcgtcttg
tccctgagagataaccagctcagtactctccccccagaactcgctggtgccactgagctg
catgtgctggatgtggtgggtaacaggttgttaaacctcccttttgccttgaccaacctc
aatctgaaagctctgtggctggccgagaaccagtcgcaaccgatgctcaaattccaaaca
gaagatgatgaaaaaagtggatctaaggtgctaacgtgctacctcctgccccagcaacct
tctcctagtctggaaaacctgcagaacagcgtggaagagagctggacagatggcaaccgc
aatcgggtcagtgtcatacagttcctggaagagcctaacatggaggaagaggatgatgaa
gctgctgaagaaagaaggggactgcagcgcagagccaccccacaccccagtgagctgaag
gttatgaagaaagccatggagggactcaggggggacagtaacacccccaaagaggagact
gggtctcccagagatgaggacaagcggctgagtggcctctccaggcagagtgctgagtcc
cagcgcagcggcagcacagtgtctgtgggattccaggaggagcagcagaacagacagaca
gaaaagctgacaaagcaagtgctggaggaggaggaagtaatggggaatgacatggaggtg
tggtatactgagccgactgtgcagtttgcagacaagaccactgttctctgtgatgatgat
tatgaggattatgatgaagatcgggcctcccctgtggagagacggctgattcgtaaggac
actccccattataagaagcatgccaagatcactaagcttcccaatgatgaggtggtggag
gccctattgcacggctttagtcccagaagcctctcggaggagggggaggaaggggagaac
gggcccttccccaggttctctttgccaaatgaagaggaagatgatgaggtggcaccagac
aaagactgggaagctgcagggagcagagacgaccggtttaactcccagcagaatatcaag
ggtgtgtcgtttgatcaagtgaataatcttctgattgaacctgctcggatagaggaggaa
gagctcactctctccatcctgcgccaaactgggggtctgggaatcagcatcgcagggggc
ataggctctaccccctacaagggcaatgatgagggcattttcatatctcgagtggcagaa
gaggggcctgcagcttgtgccggggtgagagttggggataaactgctggaggtgaatgga
gtagacttacacaatgcagaacatcacacagcagtggaggcgctgaggagttcggggagc
tcggtgtctatgactgtgctgagagagagaatggtggagcctgagaatccaatcactatg
acacccctgcgccccgaggatgattacaacccgcgggagaggctcagcgttgtcccatat
ctggaggaaaatgaggaggaaccacagaggccgtgccagcgaatcactagctgcctggca
cgtaatgacaaaggcttgggcttcagtattgctgggggagtaggaagcaccccatatcgg
gcaggagaaaccggtatcttcatctccagaatagtagaaggtggatctgctcaccgggac
gggactctcagagtaggagacagagtcatctctatcaacgaggtaaatatgacagaagcc
agacaagatcaggcagtagcactgcttaccagcacctcccccaccatcactctgctggta
gagagagagaccccccagtcaggagcccccacagacccaggagcatcgccttccctgcac
agggcccggccgcggtcacctccaccacccacagatggagacaatggagaaggggatgat
tggggcgctcccctgagtaatcacttcagccaaaagatggacgatgaggtccctattgag
gaaattgtgttagtgaaatctggggggcctttggggctcagtattgtggggggcagtgac
cattccagccatcctttcggggtccgtgagcctggagtttttatatccaaggtaatcccc
catgggctggctgcccgcagtggactcagagtgggggatagaatcctggaggcagctgga
ttggatctcagacatgtcactcaccaagaagctgtgaatgcccttctctgtaacacccag
gagctccacctgctggtgaggagggacccgccacccccaggcatgcaggagatttgtgta
gtgaaggctcctggggagaagctggggatcagtatccgagggggagcccggggccaccca
gggaatccattggatccttcagacgagggtgtttttatctccaaggtcagttcctcgggg
gccgccgcacgagacggacaactgacagttgggatgcgcattttggaggtgaatcagcag
agcctgttgggtatgacccacactgaggccgtccagtcattgagaggcgtgggagatact
ctgctcatactcgtgtgtgatggattcaaccctattgctgaaacctcttctcaggcatca
ccgggtataatcgccaatcccttcgctgctgatataggaagaaagaacagtatggaaagt
atttcttctattgatcgagatatgagtccagaagagatggagcggatacagaaggagatg
gagatggtgagagaggcgacacagtgggagagagaggacatggagaaagtggagcggatg
cgtagggagcgagaggaggccaccagactcctagaggaggagaccaagaattatagcttg
gagcctcagaagctggactataagaccccggcagcactacccgctggtgggcaggacaaa
ggagcctggctccctctgggaatggaatcttccagctcttcccctgtgcccgtggctctg
gtacaccccgtttctgcagttgtagccaatgagccgaccttgcaccccgtttccccagtg
gagtctccgctccccaccattcagcctagtcctgtggctgagcccggggcccctgtcagt
agcgcagaggcagatgaggtgctagtggactgtcagcccctccggttcagtgagaaccca
ttcattgtggctaacaagaagcgggcgggggcaagtggagctagcctgagtgggcctcct
actggctacggcagcgctggggagttgaagacaacggtgtactacaagaagactccccct
ggagacccctcagttgccacagcgaaaaaagaagccgcctgttcccccagcaatcagcag
gcctccattaacttcctgacgcaggaggagagccggccgacacagcccggggtgatcaag
tctctgcctctggtgcatgtgacccatgtctccccactaaactcctcccggcagcagcac
aggaccccccaaagtccagctccaccccttatccccgaagatggcttctccaccaatgcc
aagcaggcgtataaaacctacgcagccctcccctctacacatcccagcctggagcaacag
gaccccggcactcctccgacccctgactggaccagcaccaacattgatcagttctcccct
gggggcttagacagtcctgagcaacgttccttccgagaccgccagaagtactttgagatg
gatgtcaagcagcaggctgagaaaccccccaaacgtgtgtctctggtgggggaagatgac
ctgaggaagatgaaggaagaggaagcccggaggatccagatgaagagagagcagctcctc
cgagaagaggaagagggcagtgcaggagacgccagccctcatacaaggggccccaccacc
ccaacaagtgtctttattgagggagttgagtacaaaatggagagggtggatggaggcagc
ctctcctctctcactgggttctctccctcggaatctcagaggaattcactggaagactct
ttgcggactgagcagagacccaactctatgtcggggttgacccctgtgtatccgggggga
ttggagtctgtcccaccggtgcgcactgtgaaagcagagaagcgactgcaggaacgactc
aggatgcagagccccgagctcacggagcaggagaagcagttgtccccggtcgagcgcaga
gccctgcaagctgaaaagagagcaatgtggagggctgccagcaatatggaggacagtatt
aagcagtatgagctgtctcttgcacggaagctgtaccagtcccggcagaacaagcctcag
atccctgaggagagaggaaggatgaagtctctggagcaggacgcactgaaggctcagatg
atgattgcgcactccaaggacagccgcaaatgtagcaccctggatcaactggccgagtcc
ccttcccctgcacccactccatcacccaccccactggaagattacagcccccggctactg
acatctccagggcgactgtctcattcagacaagaagtttgactacagacaatttgccgct
attccgtcttccaaaccggtgtatgagatccagtccccagagttgacgccaaacctgaaa
tgcccagaagattccagaacatcagttacctgtagcttagagcatgtccagcaggaggag
gaggagcatgaaggagagcccgcccccaacacatcagcactggaggaaatggccacatac
aacaagcgcaagcttcagcacacgaggcggagcctggagaccgccgcccccacatag
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