Xenopus laevis (African clawed frog): 100137618
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Entry
100137618 CDS
T01010
Symbol
rlim.L, rlim-a, rlim-b, rlim.S, rnf12, rnf12-B, rnf12b, XRnf12, xrnf12b, XRnf12C
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12-B
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
100137618 (rlim.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100137618 (rlim.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100137618 (rlim.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
zf-RING-like
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
100137618
NCBI-ProteinID:
NP_001108244
Xenbase:
XB-GENE-6256130
UniProt:
Q7T037
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All DBs
Position
8L:complement(38505627..38522423)
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AA seq
757 aa
AA seq
DB search
MESADSTGKGSTEQSESQRQSQMDRLDREEAFYQFVNNLNDEDYRLMRDNNLLGTPGEIT
KEELLQRLQQIKEGPPQPSTEETRGDSVSTGEDPAEDSSNGDSIIDWLNSVRQTGNTTRS
GQRGNQSWRAVSRTNPNSGDFRFSLEINVNRTSGTASMPSLDQSAEMPGPEDMEVSSQGE
AENVPEPETVPESIREPESVDEPVSVAEPVSVAEPVSVAEPESVAEPESVAASVPVPESV
PEPESVPEPESVPEPESVPEPESVPEPESVPEPESVPEPESVPEPESVPEPESVPEPESV
PEPESVPEPESIAEPESVPVPESVPVATRPAPVEVTVEEAPIQRGQRRARSRSPDQRRTR
ARTDRSRSPLYQTVDPPIRRAQHSSSQTVDASNTEEAEGSSRTRHHVSSQVHSSSSNETE
GSSRTRQHITARQQALGTEGQSQSTVHLSNPESRSSSQTPQTDSPSNAETTGTGQRPPTI
VLDLQVRRVRPGDYRQRDSIANRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGVRTYV
STIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYNDNDADPNNPTAVSPPAA
VPGEVQNNPSAEVRAPIAEPAEPVAPVESDEGSNVATSATRREGRNSRGGVTLEESGSLP
FLSLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNYGENDALKTCSVCITEYTEGNKLRKLP
CSHEYHIHCIDRWLSENSTCPICRRAVLVAGNRESIV
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgcggattccaccggaaaagggagcactgaacagtcagagtctcagcgccaa
agccagatggacaggctagatcgagaggaagctttttatcagtttgtaaataacttaaat
gatgaggactacagactaatgagagataacaacttattggggactccaggggaaattact
aaagaggaattgttgcaaaggcttcagcaaatcaaagaagggccaccacagccaagtaca
gaagaaacaagaggcgattctgtctccacaggtgaggaccctgcagaggattcatccaat
ggagattccataatagactggctgaattcagtgcgacagactgggaacacaacacgaagt
ggtcagagaggcaatcagtcctggagggcagtgagcaggacaaatccaaacagtggggat
ttcaggtttagtttggaaatcaatgtgaatcgtacttctggcaccgcaagcatgccttcg
cttgaccaatcggctgaaatgcctgggcctgaggatatggaagtgagtagtcagggtgag
gctgagaatgtacctgaacctgaaactgtacctgaatctatacgtgaacctgaatctgta
gatgaacctgtatcggtagctgaacctgtatcggtagctgaacctgtatcggtagctgaa
cctgaatcggtagctgaacctgaatctgtagctgcatctgtacctgtacctgaatctgta
cctgaacctgaatctgtacctgaacctgaatctgtacctgaacctgaatctgtacctgaa
cctgaatctgtacctgaacctgaatctgtacctgaacctgaatctgtacctgaacctgaa
tctgtacctgaacctgaatctgtacctgaacctgaatctgtacctgaacctgaatctgta
cctgaacctgaatctgtacctgaacctgaatcaatagctgaacctgaatctgtacctgta
cctgaatctgtacctgttgccacaaggccagcaccagtagaggtgacagtagaggaagct
ccaatacagagggggcaaaggagggccagaagcaggagtccggatcagcgcaggacgcga
gctagaaccgatagaagcagatcccctctatatcaaactgttgatccacctattcgaagg
gctcagcatagttcatcacagactgttgatgcttccaatacagaagaagcagagggtagc
tctaggactaggcaccatgttagttctcaagtgcacagctcttcatcaaatgaaacagag
ggtagttctagaactagacagcatattacagccagacaacaagctcttgggactgaaggt
cagagccaaagcactgttcatctgtcaaaccccgagtcaagaagctcttcccaaactcct
cagacagactcccccagtaatgcagagactacaggtaccgggcagaggcctcccaccatt
gtgctagatctgcaagtaaggcgcgtgcgcccaggtgattacaggcagagagacagcata
gctaaccggacacgttcacgctctcagactcccaacaacactgtcacatatgagagcgag
agaggaggatttcgtcgcactttctcgcggtctgaacgtgccggggttagaacctatgta
agtaccatccgaattccaatccgaagaatcctgaacactgggctcagtgagaccacatct
gtagccatccagacaatgctgaggcaaataatgactggctttggggaactcagctacttc
atgtacaatgataacgacgctgatcctaacaaccccacagcagtatctcctcctgcagca
gttcctggtgaagtacaaaacaacccaagcgcagaggtcagagctcctattgctgagcct
gcagaacctgttgctccagtggaaagtgatgaaggcagcaatgttgcaacatctgcaacc
aggagggagggtcgcaatagcagaggtggtgtcactttggaagaaagcggatctctacct
tttcttagtctggcccagtttttcctgcttaatgaggatgatgatgatcagccaagagga
ctcaccaaagagcaaatcgacaacctgtccacccgaaattatggtgaaaatgatgccctg
aaaacctgtagcgtgtgcataacagaatatacagaagggaacaagctgcgcaaactgcct
tgttcccacgagtaccacatccactgtattgaccgctggttgtccgaaaattctacctgt
cccatctgtcgccgagcagtcctggttgcaggcaacagagagagcattgtgtaa
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