Xenopus laevis (African clawed frog): 100158281
Help
Entry
100158281 CDS
T01010
Symbol
sort1.S, gp95, ldlcq6, sort1, sortilin
Name
(RefSeq) sortilin 1 S homeolog precursor
KO
K12388
sortilin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100158281 (sort1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
VWC2L_1st
Motif
Other DBs
NCBI-GeneID:
100158281
NCBI-ProteinID:
NP_001121210
Xenbase:
XB-GENE-4755068
UniProt:
B1H1Q9
LinkDB
All DBs
Position
2S:complement(60760424..60808747)
Genome browser
AA seq
801 aa
AA seq
DB search
MRLPRGLGSRLVALLLVLSCDVSWGAYRKDELDGRPALAALGPRNRRSLEQNRTPADDGT
CAEKWAFQGALENDTHLCQFDLSGELSLMWIGDGTGIILVLTTFRVPLFVMTYTQSKLYR
SNDYGKTFQDVTSLINHTYIHSEFGMAIGPDNSGKVILVADVSGGSNGGRIFRSSDSAQT
FVQTDLLFHPLISVLYSPENSNFLLVLSVDFNLWISKDFGETWKEIHHSVCSAKWAAGST
IIFTIDGNNSCKADFRLMTLKRTSDFGQTFQVLRDRVHSFGLWGRFLLASVVELDGLNRK
IHVSQNQGDKWNVAQLPSVTYEQFYSVLAANDDMVFIHVDDEGDTGCGTIYTSDDRGILY
SKSLERHLYTTTSGETDFTNVTSLHGVFITSVLSEDNSIHSVISFDQGGEWSPLRKPENS
QCDSTAKDKEQCSLHIHAQYSISQRLPVPMPPLSEPNAVGIVIAHGSVGDAVSVSRPGVY
LSDDGGYSWSRVLDGPHHYAILDSGGLIVAVEQADDTVNTIKFSTDEGQCWFYYKFTNDS
FIFTGLASEPGALSLNVTIWGYQPGVVHHIWMSYTIDFAHILHKACEERDYILWLAHSTD
PQAPSDGCVLGCKDQYFRLRKSSVCQNGRDYTVSKVHSPCACTVDDYMCDFGYYRNENES
ECVEQAELKGHELDLCVYGEEEKLTTSGYRKIPGDKCTGGTQYERKEIDMKKKCLNAESI
KVPTSSLVPVIISVVFVMLVAVIAVVLIIKKHVCGGRFLVHRYSVLRQNMDAQGDDPLDT
DFGPPHRGSGFHDDSDEDLLE
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttacccagggggcttggtagccggcttgttgcccttcttcttgtgctgtcatgc
gatgtgtcgtggggagcctatcgtaaagatgaactggatggccgcccagcgttggcagca
ttgggtcctcgcaatcgaaggagtctggaacagaacaggacaccggcagacgatggaact
tgtgcggagaaatgggcctttcagggcgctctggaaaacgatacccacttgtgccagttt
gaccttagtggcgaactttctctaatgtggattggtgatggaactgggattatactggtt
ctgaccacatttcgtgtacccctttttgtcatgacctatacacagtcaaaactgtatagg
agcaatgattatgggaaaaccttccaggatgttacatctctcatcaaccatacttacatt
cattctgaatttggcatggctattgggcctgacaactctggcaaggtaatcttggttgct
gatgtatctggtggcagcaatggcggccgtattttcagatcctcagactctgcacagacc
tttgttcaaacagatcttctatttcatccactgatatctgtcttatacagcccagaaaat
tcaaacttcctgttggtgcttagtgttgattttaacttatggatttcaaaagattttgga
gaaacgtggaaggaaatacatcattctgtgtgttctgcaaagtgggcagctgggagcacc
attatctttaccatagatggaaacaactcctgtaaagcagacttccggttgatgactttg
aaaagaacctcagattttgggcaaactttccaggtgctaagagaccgtgtccattccttt
ggactgtggggacgttttctgcttgcttctgtagtggagttggatggactaaataggaaa
atccatgtttctcagaatcaaggggataaatggaatgtggctcagcttccatctgtaaca
tacgaacagttctactctgtgttagcagctaatgatgacatggtgtttatccatgtggat
gatgaaggagacactggatgtggtactatatacacatcagatgaccgtggtattttatat
tcgaaatcattggagcgccatctctacacaacaacatcaggggagactgatttcaccaac
gttacatccttgcatggagtcttcatcaccagtgtgctctctgaagacaactctatccat
tctgtgatttcctttgatcaggggggtgaatggagtcccctgaggaagcctgaaaactca
cagtgtgactcaacagctaaagataaggagcagtgcagtctacatatacatgctcagtac
agcatttcccagaggctaccagtgcccatgccacccttgtctgaacctaatgctgttggg
attgtcattgctcatggtagtgtgggagatgcagtatcggtttcccgccctggggtgtat
ctctctgatgatggagggtactcctggagcagagtgctagatggacctcaccattatgcc
attctggattctggaggactcattgtggctgtagaacaagcagatgatactgtcaacaca
atcaagttctccacagatgagggacagtgctggttctattacaaattcacaaatgattct
ttcatatttactggcttagcatctgagccaggtgctctttcgctgaatgtgaccatatgg
ggatatcagccgggtgttgttcaccacatctggatgtcttacactattgattttgcacat
attttacacaaagcctgtgaagaaagggattacattttgtggctggcacactcaactgat
ccgcaggcaccatcagatggttgtgttttgggatgcaaagaccagtattttcggctacgc
aaatcttctgtttgtcagaatgggcgtgattatacagtgagcaaagtccactccccttgt
gcttgcaccgtggatgactacatgtgtgattttggttattaccgtaatgagaatgaatcg
gagtgtgtggagcaggctgagctgaagggacatgaactggatctgtgtgtatatggagaa
gaggagaagcttaccactagtggttatcgaaagattcctggagacaagtgtactggagga
acgcaatatgaacgaaaagagatagacatgaagaagaagtgcttgaatgcagaaagtata
aaggtgcccacttcgagtttagtaccggtaatcatttccgtggtttttgttatgcttgtc
gcagtcatcgccgttgttctgataattaagaaacatgtctgtggaggaaggttcctggta
cacaggtattctgttttgcggcagaacatggatgctcagggtgatgatccattggacact
gattttggaccgcctcataggggatctggtttccatgatgactcagatgaggatcttttg
gagtga
DBGET
integrated database retrieval system
