Xenopus laevis (African clawed frog): 100158419
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Entry
100158419 CDS
T01010
Symbol
khsrp.L, comp79, fbp2, fubp2, khsrp, khsrp-a, ksrp, VgRBP71
Name
(RefSeq) KH-type splicing regulatory protein L homeolog precursor
KO
K13210
far upstream element-binding protein
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
100158419 (khsrp.L)
03041 Spliceosome [BR:
xla03041
]
100158419 (khsrp.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100158419 (khsrp.L)
Spliceosome [BR:
xla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100158419 (khsrp.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
100158419
NCBI-ProteinID:
NP_001121330
Xenbase:
XB-GENE-493321
UniProt:
B1WBB7
A0A8J0QDG6
LinkDB
All DBs
Position
3L:complement(150897187..150923250)
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AA seq
732 aa
AA seq
DB search
MMGMCLVFLLQTSQSVRNWQPNPTQTPLSLLQSSFFSQGALLAAALFAPSARGGAAAAMS
DYPGAQSGNRKDAFADAVQRARQIAAKIGGDATGGVNNTPDFNYGGQKRQLDDGDVFGFP
SPDQPECKKLATQPDPNPPQLAPVHPPRSSSMTEEYRVPDGMVGLIIGRGGEQINKIQQE
SGCKVQISPDSGGMPERVVSLTGSPDAVQNAKMLLDDIVARGRGGPPSQFHDSSNGQNGS
LQEIMIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQNTNMDKPLRIVGEPFKVQQ
ACEMVMDLLKERDQANFDRNEYGSRGGGGGGGGGIDVPVPRHSVGVVIGRSGDMIKKIQN
DAGVRIQFKQDDGTGPDKIAHIMGPPDRCEHAARIIGDLLQSLRTGPPGPPGPGMPPGGR
GRGRGQGPWGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPN
FKMFTIRGNPQQIDHAKQLIEEKIEGPLCPIGPGPPGPGPAGPMGPYNPGPYQPGPPGAP
PHQGPPPPPPPHQYPPQGWGSTYPQWGQPPAPHDPSKPPAPTDPSAAWAAYYSHYYQQPP
APVPGQPPAVPVPPPQGEPPIQPPPASQPDYTKAWEEYYKKMGQQTPQPAGQPDYTKAWE
EYYKKQAVAQAVANPGAPAVVAAAATAAPPAAQPDYSAAWAEYYRQQAAYYGQAPGAPPT
QPPPAQPGPQAQ
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgatggggatgtgtttggttttccttctccagaccagccagagtgtaagaaactggcaa
cccaacccgacccaaacccccctcagcttgctccagtcctccttcttttcccagggtgct
ttgcttgccgcggccttgttcgcgccttcagcccgcggaggagccgctgccgccatgtca
gactatcccggagcccagtccgggaaccgcaaggacgcgtttgccgatgctgtacagagg
gcccgccagattgccgcaaagatcggaggcgatgccaccggcggtgtgaacaacacccca
gattttaactacggagggcagaaaaggcagttagatgatggggatgtgtttggttttcct
tctccagaccagccagagtgtaagaaactggcaacccaacccgacccaaacccccctcag
cttgctccagtccaccctccaaggtcgtcttccatgacagaggagtatcgcgttccagat
ggcatggtgggactcattattggtcgcggaggagaacagatcaacaagattcagcaggag
tctgggtgcaaagtacagatatctccagacagtggcgggatgcctgagcgggtcgtttcc
ttgactggatctcctgatgctgtacagaatgctaagatgctgctggacgacattgttgcc
agaggtcgagggggtcctcctagccaattccacgacagctccaatgggcaaaatggttcc
ttacaggagatcatgatccctgctggcaaagctggactgatcattgggaaaggtggagaa
accataaaacagttacaggaaagagctggcgtcaaaatgattctgatacaggatggatca
caaaataccaacatggataagccacttcgtatagtgggagaacctttcaaagtgcagcaa
gcctgtgaaatggtgatggatcttctaaaggagagggaccaggctaactttgacagaaat
gagtatggttcacgaggtggaggaggaggtggtggaggtggtattgatgtacctgtcccc
cgacactcggttggagttgttataggacgcagtggggatatgattaagaagattcagaat
gatgctggtgtcaggatacagttcaaacaagatgacgggacaggtcctgacaaaattgct
cacatcatgggccccccagacaggtgtgagcacgcagcaaggattatcggcgatctcctt
cagagtttaaggactggtccccctggtcctccgggtcctggaatgcctccaggtggcaga
ggaaggggtcgagggcagggtccttggggtcctcctggtggtgaaatgacattctctata
cccactcacaagtgtggactggtgattggaagaggtggggaaaatgtgaaggcaattaat
cagcaaactggagcatttgtcgagatctccaggcagccgccgccgaacggagaccccaat
ttcaagatgtttaccattagaggtaacccccagcagatcgaccacgccaagcagctgatt
gaggagaagattgagggccctctttgtccaattggacccggcccacccggtccaggcccc
gcaggtcccatgggaccatataaccccggcccctaccagcctggacctccaggagcccct
ccacaccaaggaccccctcctcctcctccacctcatcagtaccctcctcaaggctgggga
agcacatacccccagtggggccaacctccagcacctcacgacccctcaaaaccacctgct
cccacagatcccagtgctgcatgggctgcttactactctcactactaccagcagccccct
gctccagtcccagggcagccccctgctgttcctgtacctccacctcaaggagaaccccca
atacagcccccgccggccagccagcctgactacacaaaggcctgggaagaatattacaag
aaaatgggtcagcaaactccacagccagcgggacagccagactacacaaaagcctgggag
gaatattacaagaagcaagcagtcgctcaggcagtagccaatccaggagcaccagcagtg
gtggcagcagcagcaacggcggctccacctgcagcacagccagattatagcgcagcatgg
gcagaatattaccgacaacaagcagcatattacggacaggcaccaggagctcctcccaca
cagcccccacccgcacagccggggccgcaggcccaatga
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integrated database retrieval system
