Xenopus laevis (African clawed frog): 100158434
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Entry
100158434 CDS
T01010
Symbol
caprin2.L, c1qdc1, caprin2, eeg-1, eeg1, rng140
Name
(RefSeq) caprin family member 2 L homeolog
KO
K18744
caprin-2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
100158434 (caprin2.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100158434 (caprin2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
C1q
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
100158434
NCBI-ProteinID:
NP_001121343
Xenbase:
XB-GENE-1014058
UniProt:
B1WBD5
LinkDB
All DBs
Position
3L:17063035..17091181
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AA seq
943 aa
AA seq
DB search
MERPSIKTSKKQLRSTKKLFITWSLPKNFKKTFSALSQDLLKAQKKALRKEHLLKVEAEK
KRLRAILQVQYMLQALRHDHVQKDFKEGSNGAVCLSSKEMDHLVKFAKLSCQKQCHHMSL
EDQMDQSSIYFWNLFEGSEKTVAGTTYKYLKELATKLLDCGYFESVRDPPVMKARKEDIP
EVPPTKVEAGKAAIEEPEPPVEYAKCTSRPQGLPVRHFVALTPKPEPAKQNTDTYKATDM
KYHSALKPWGMSPNVRHPEPRRWQTSPVPTPLPSTLLGPNPAPMLTPQIKQWEAMPPRLK
KCDPDPKEANIPSKVQPYQMRMRVPKVPSEVEPVASIKLLSKGLTDLKPPNAVNGQLPMK
RREVLPTIVANGQLPPAVNNTQPHKVPLLAVDEFCSSPTLPKDPKLRKQRLEDLIDQIKG
TYNFMQDSMLDFDMPSQRLLSSQLPCETSVVSSEPKQNEIDPVLQLEEASSVSLDTQKDG
VTCEMLSEPEIAEPLEPNPELENLPVAPLEEQSCLVEQITEASPDLLETLPERTTTPLPL
LSDQLPSPKTPTHTSVLQLQQQCPPLSPRHTPVSMSSPFQGMQTVFKVNAPLPLRKEQEL
KEEPPYSTGYHQTFTTASTQTLPQCMLDTSFGDQNSFIQEPFPGSPYPSTGIQVNGSLPC
YTSTPNLLPRMTPPFVSSRGTVRGTNRGRVITNGYRCPTGYKGPESYRGTQCVNNGNYVH
AHCPGREYPATPFISRDGSSNLHKQRTNAITRTSSRGFSESSQMNSPEKEDSFNSIDSGL
GETRSLTSLDMSMTSQAATILPVHVYPLPQQMRVAFSAARTSNFAPGTLDQPIVFDLLLN
NLGDTFDFQVGRFMCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHE
TASNHAVLQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggagagaccctcaatcaagaccagcaagaagcagttgagaagtacgaagaagttattc
ataacttggagtttgccaaagaacttcaaaaaaaccttctctgcactgagccaagatctt
ttaaaagcccagaagaaagccctgaggaaggaacacttgctgaaagttgaagctgagaag
aagcgattgagggccatcctgcaggttcagtacatgcttcaagccttgcgccacgaccat
gtgcagaaagacttcaaggaaggatccaacggggcggtgtgcctctcttccaaagaaatg
gaccacctcgtgaagtttgccaagttaagctgccaaaagcagtgtcaccacatgagtctt
gaagaccagatggatcagtcttcaatctacttctggaacctgtttgaaggcagtgagaaa
acagtggctggtacaacctataaatatttaaaggaattggctaccaagctcctggactgc
ggctattttgaaagtgttcgagatccccctgtaatgaaggctaggaaagaggatattcca
gaagtgcctccaacaaaggtcgaagctgggaaagctgcaatagaagaaccagagcctcct
gtggaatatgcaaaatgtaccagtcgccctcaagggcttccagttaggcactttgtagct
ctaactccaaaaccagagccagcgaagcaaaatacagacacgtataaagcaacggacatg
aaatatcattcagcattgaagccctgggggatgtctcccaatgtcagacatccagaacca
agaagatggcagacttctcctgtgccaactcctctgccatccactctattgggacccaac
ccagccccaatgctgacccctcagatcaaacagtgggaagctatgccacccaggctgaag
aaatgtgaccctgatccaaaagaggcaaatataccttctaaagtacaaccatatcaaatg
cggatgcgtgtgccaaaagttccttctgaggtggaaccagttgcttccataaagctgctc
agtaaaggtctcacagatttgaagcccccaaatgctgtaaatgggcaacttccaatgaag
agaagggaagttcttcccaccattgtggctaatgggcagctgcctccagcagtgaacaat
actcagccccacaaggtaccattgctggctgtggatgagttctgctcttctccaactctc
ccaaaagatcccaagttgaggaagcagagacttgaagatcttatagatcagataaaggga
acatacaactttatgcaggattccatgctggattttgacatgccatctcaaagactcctc
tcttctcagctgccctgtgaaacttctgtagtttcctctgaaccaaaacagaatgaaatt
gacccagttctacagctggaggaggcttcctctgtatccctggacacacagaaggatgga
gtcacctgtgagatgttgtctgaaccagaaatagccgaaccattggaaccaaatccagaa
ctggaaaatctgcctgttgcacctcttgaggagcagagttgcctggttgagcaaatcact
gaggccagcccagaccttcttgagaccctaccagagaggaccactactccactacctctg
cttagtgaccagctaccctctccaaagactcccacccacacatctgttcttcagttacag
cagcagtgcccacctttgtccccaaggcatacaccagtgtcaatgagttcccctttccaa
gggatgcagacggtctttaaggttaatgcccctctgcctctacgcaaagagcaagagctg
aaagaggagcctccatattccacagggtatcaccaaaccttcactacagcaagtacccaa
acacttcctcaatgcatgttggacaccagctttggagatcagaactctttcatacaagaa
ccatttccaggaagcccatatccatcaactggaatacaggtgaatgggagcctcccatgc
tacacatccactcccaacctcctgccgaggatgaccccaccttttgttagcagtcggggg
actgtcagaggaacaaacagagggagggtaataactaatgggtatcgttgcccaactggg
tataaaggtccagaaagttacagagggactcagtgtgtaaacaatggaaactacgttcat
gcccattgtccaggccgggagtatcctgccacaccgtttatatccagggacggaagctca
aatctccataaacaaagaaccaatgctattacccgtaccagttcaagaggttttagcgaa
tcttctcagatgaacagcccagagaaggaagacagcttcaacagcatagattcagggctt
ggcgaaacacgcagcctcacttctctggatatgtctatgacaagtcaagcagcgaccatc
ctgccagtccatgtctatcctctccctcagcaaatgagagtggctttctctgcagccaga
acatccaactttgccccaggcaccctagatcagccaatcgtgtttgacctgctgctgaac
aaccttggcgacacgtttgacttccaagtcgggcgattcatgtgtccagtgaatggaacc
tatgttttcatcttccacatgctaaagctagctgtgaatgttccgttgtatgttaacctc
atgaagaatgaggaagtgcttgtgtctgcttatgccaatgatggtgccccagaccatgag
actgcaagcaatcatgcagtcctacagctcttccaaggagaccagatatggcttcgccta
cacaggggagccatttatggcagcagctggaaatactccacattttctggttaccttctt
taccaggactaa
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