Xenopus laevis (African clawed frog): 100190776
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Entry
100190776 CDS
T01010
Symbol
lmo7.L, lmo7
Name
(RefSeq) LIM domain 7 protein L homeolog
KO
K06084
F-box protein 20
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100190776 (lmo7.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
100190776 (lmo7.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100190776 (lmo7.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
100190776
NCBI-ProteinID:
NP_001128702
Xenbase:
XB-GENE-949059
UniProt:
B5DE43
LinkDB
All DBs
Position
2L:complement(132120891..132232444)
Genome browser
AA seq
1274 aa
AA seq
DB search
MEWNENSEVSCDLAYSEAQRWIEEVTGKNFGNKDFRSALENGVLFCDLINKIKPGIIKKI
NRLSTPIAGLDNINVFLRACEKLGLKEAQLFHPGDLQDLSSRVTVRQEETDRRLKNVLIT
IYWLGRKAQGDSYYNGPYLNLKAFEGLLGQTLIKVLEESSSLKRSGRDSGCSDLWYSEQR
DSVTSPTVHKRDDSWDSLDSFGSKSYTSFSSDTTIKGSSEGVESETESELTDKMQDSSKD
DMSHRRVSAMEPKVTANFNQFLPNKTKHFNNMPAPLRKKRIDKNEDNRRSWASPVFTEPD
GTFSRSKSLEANTAEELISNRQVRYEELQKIRNQLQEQDQQWQNDLAKWKNRRKSFTSDV
QKKNDDREESEKISTESTERTYKTFREMQQERETRNQDNYYLNKERSEDRKMYSSNDDIF
GDVNVPSKRMLERSYTVAVEAPYTMSKGTAQDTANAQKKENNSGVTSELPPTSHSTVETD
GIYSSKANTSYAEQGPEKSDFKTSKSLFERSYTVESGAPYNNKKETIYSVTSYEKQDNGP
PMNSGSLLGEQHSYSSFVTESKPIPGLTSLPRSYQKNDTSRLTAVVTPRPFGIQSKGITS
LPRSFTMDDSSKYNGDLSSTKNNSTFNSYFKVEEKPNRTPQSKEADEPDEKESIRRSISP
KPFPVVSAAPEKHMISESVNVASSARGVEQTNVPGPLDQYSDLRISINQKPGSSHDFGFK
TSWNSAGVFVKSVDVGSPAEFCHLHVDDEILSLNGTKVSSMDYNQWVETMDQAVETGNLS
MDVRRYGKNDWGRDPPSLPYKSHKTLNLTSMDPKLIGSPENKWIDASRSQSTSLKKDIPD
SGNATNLLNGLQDSPQKASESISLKNYKRRSQFFEQGSSDSSLLDMPVPSINVSTHRSWD
PEDERKRQEKWLQEQEQILQEKYKREQEKLRQEWERAQQEAEKERFQQIQQEQTHSSMSR
TSPSSYWKTFGSEVSDDMQSSEEDDRQKERRSEEELESERQWKRAEEERLRKKFQEEEEQ
RQRNNVLKSNDSRTPDDGDHTDSGTNESTGNPQLRPYKEQGHGSAEVDRQRIIQEMRKRA
SLHNDNSWIRQRSSSMTKDTSSLPNYMRRGESLDNLDSTSGLQRVSPWTNQSSSYNSLSS
SQDFSRPSQVVSTSNRTFSRNSSNSLPQSSAGSLSQTSSTLPQTQPSSQISNQQRNKSVS
GKKLCSYCNNSLGKGAAMIIESLGLCFHLQCFKCVACETDLGGSTSGAEVRIRNGELYCK
SCYIRFKMGQPTSM
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggaatggaatgaaaattcagaggtgtcttgtgacttggcttattccgaagcacaaagg
tggattgaggaagtcactggtaaaaactttgggaacaaggattttcgttcagctcttgaa
aatggggtgctgttttgcgacctgattaacaagattaaacctggaatcatcaaaaagatc
aatcgcttatccacacccatcgctggcctggataatatcaacgtctttctgcgagcctgt
gagaaacttggattaaaagaagcacaactttttcaccctggggatcttcaggatttatct
tctcgagtcacagtccggcaagaagagacagatagaagattaaaaaatgttctgatcacc
atatattggctaggaaggaaagcacaaggtgattcatattataatggtccttacctgaat
ctaaaggcttttgaaggcttattggggcaaactctgattaaggtgcttgaagaatccagc
agtttgaaacgaagcggcagagatagtggttgtagtgatttgtggtatagtgaacaaaga
gacagcgttacttctcccactgttcataagagagacgattcctgggacagtttggactct
tttggttcaaagtcttatacaagcttctcatcagacacaaccattaaagggagcagcgaa
ggagtagaaagtgagacagaatctgaacttactgacaaaatgcaggacagcagcaaagat
gacatgtcccatcgtagggtgtcggccatggagcctaaagtgaccgcaaattttaatcag
tttctaccaaataaaaccaaacacttcaataacatgccagcaccactgagaaaaaaacgc
atagataaaaatgaagataacaggaggagctgggcaagcccagttttcaccgagccagat
ggcacattttccaggagcaagtctttggaagcgaacactgcagaggaactgattagcaac
cgacaagttcgctatgaagaattgcagaagataagaaatcaacttcaggagcaggatcag
cagtggcagaatgatttagcaaaatggaagaatcgtcgaaaaagcttcacgtctgatgtt
cagaagaaaaatgatgacagagaagagtctgaaaaaatttctactgaaagtacagagcga
acatacaaaacattccgagagatgcaacaggagagggaaacccgaaatcaagataattat
tacttgaacaaagaaagatcagaagaccggaaaatgtactcttccaatgatgatattttt
ggtgatgtaaatgtaccatccaagcgtatgctggaaagaagctatactgttgcagtggaa
gccccctataccatgagtaagggcactgcacaggatacagctaatgcccagaaaaaggaa
aacaacagtggtgtaacatctgaactgcccccaacatctcattctacagttgaaacagat
ggaatttactcttcaaaggcaaacaccagttatgctgagcagggcccagaaaagtctgat
ttcaaaacatccaaatcactgtttgaaagaagttacactgtggaatctggcgcaccttac
aacaataagaaagaaacaatttattccgtcacaagttatgaaaagcaggacaatggccca
cctatgaactccggtagcctgctaggcgagcaacattcttacagctcctttgttacagaa
agtaaacccattccaggtttaacttctttgccaagaagttatcagaaaaatgatacttca
agattaacggcagtagttacccccaggccatttggaattcagtcaaagggaatcacgtca
cttccacgatccttcacaatggatgattcctccaagtataatggggatcttagttctaca
aagaataattccacatttaactcctactttaaagttgaagagaaacccaacagaactcca
caaagtaaagaggctgatgagccagatgaaaaggaaagcattagaagaagtatttcacct
aaaccattccctgtggtcagtgctgctccagagaaacacatgatttcagaatccgtaaat
gtcgcatcttctgcaagaggggtagaacaaaccaatgttccagggccactggaccagtac
agtgacctgagaatcagcattaaccagaaacctggaagcagccatgactttgggtttaaa
acaagctggaacagtgctggggtctttgtaaagtctgttgatgtagggagtccagcagaa
ttttgtcatctgcatgtagatgatgaaattctatctctcaacggcacaaaggtttcatca
atggactacaaccagtgggtggaaacaatggatcaagctgtagaaactggaaacctatct
atggatgtcaggcgatatggcaagaatgactggggcagagacccaccttccctgccatac
aaaagccataaaaccctcaatctgaccagtatggatccaaaacttataggttctcctgaa
aataaatggattgatgcaagcagatcacaaagcacctccctgaaaaaagacatccctgac
tctggaaatgcaacaaatctgttaaatggactacaggattctccacaaaaagcatctgaa
tctatttcattgaaaaattataaaagaaggtcgcagttttttgagcaaggaagttcggat
tcttcattacttgatatgccagttccttcaattaatgtttcaacacaccggtcttgggat
ccagaagatgaacgaaaacgtcaggaaaagtggcttcaggaacaagaacaaattctgcag
gaaaagtacaaacgtgagcaagaaaaactgagacaggagtgggaacgtgctcaacaggaa
gcagaaaaggagagatttcagcaaattcagcaagaacagacccactctagcatgtccaga
acatcaccgtcatcatactggaaaacatttggctctgaggtatctgatgatatgcagagc
agtgaagaggacgacagacagaaagaacgacgatcagaggaggaactagaaagtgagaga
caatggaaaagagcagaagaagaaagactgcgtaaaaaattccaggaagaagaggagcag
agacaaaggaataatgttttaaaatcaaatgattctcgtaccccagacgatggagatcac
actgattcgggcactaatgagagcacaggaaatccgcagctgagaccatacaaggaacaa
gggcatggttcagcagaagtggacaggcagcggatcattcaggaaatgagaaaaagggca
tcgctccataatgacaacagctggattaggcaacgcagttctagtatgacaaaggataca
tcatcccttcctaactatatgagaagaggggaatcattagataatcttgactccacctca
ggtttgcaaagagtgtctccttggacaaatcagtcctcatcttataactcattgtcatcc
agtcaagacttcagtcgaccatctcaggttgtttccacatctaatcgtactttctcgcgc
aactcatccaatagtttgccacagtcttctgctggctccctttcccaaacttcctctact
ctgcctcagacacagccatcatcccaaatatccaaccagcaacgcaataagtcagtgagt
gggaagaaattgtgctcttactgtaataacagtctgggcaaaggagcagccatgatcatc
gaatctcttggtctttgttttcatttgcagtgttttaagtgcgttgcatgtgagaccgac
ctcggaggctccacatctggagctgaagtccgaatccgtaacggcgagctgtactgcaaa
agctgctacatcagattcaaaatggggcagccaacctccatgtga
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