Xenopus laevis (African clawed frog): 100192361
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Entry
100192361 CDS
T01010
Symbol
cdh20.L, cdh20
Name
(RefSeq) cadherin-20 precursor
KO
K06807
cadherin 20, type 2
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
100192361 (cdh20.L)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Major cadherins
100192361 (cdh20.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
TAS2R
Motif
Other DBs
NCBI-GeneID:
100192361
NCBI-ProteinID:
NP_001131054
Xenbase:
XB-GENE-1011623
UniProt:
Q91838
LinkDB
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Position
6L:89409858..89454824
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AA seq
790 aa
AA seq
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MSCKRSYHRHCALVYYMVLLDLTNAVFEFSHPLIRDSGNSQSRQLLHHRLKRSWVWNQFF
VLEEYTGTEPLYVGKLHSDMDKGEGSITYILSGDGAGTMFTIDETTGDIHAIQRLDREER
SQYTLKAQALDRRTTRPMEPESEFIVKIQDINDNEPKFLDGPYTASVPEMSPVGTSIIQV
SATDADDPTYGSSARVVYSILQGQPYFSVDSKTGIIRTALTNMDRESRDYYEVIIQAKDM
GGQLGGLAGTTTVNVTLSDVNDNPPRFPQKHYQMSVLESLLINSTVGRVLAMDLDEGVNA
EMKYNIIDGDEFEVFDIVTDPSNQVGVITVKKPLDFETKKSYTLKIEGSNAHLEIRFLNL
GPFRDTTSVHITVEDVDEPPVFGSSFYFVEVSENVDIGTTIQIVSAKDPDATNNSVRYSI
DRSSDPGRYFYVDVTTGALMTARPLDREEVSWHNITILAMEMNNPAQIGGVPVTIKVLDV
NDNAPTFTKFSETLMCENAKADQLIQTVSAVDQDDPQEGQHISYSLAPDAANNPNFTLRD
NQDNTAWILTRRPGFKQSEQSTFYLPLLISDNGNPRLSSTGTLTIQVCSCDKDGDIMSCN
AEPYTLPISLSRGALIAILTCIFVLLVLVLLILSMRRHRKQPYTIDEEDNVHENIVRYDD
EGGGEEDTEAFDIAALWNPREAHMGKTRQDMKPEIESLSRYVTQTCRMDNNVHSYMLAKL
YEADTDVCAPPFDSLQTYMFEGEGSVAHSLSSLQSLSTDSEQSYDYLSDWGPRFKKLAEM
YGTKDNNGSL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtaaaaggagctatcacagacattgcgcacttgtatactacatggtgctattg
gacctgacaaacgctgtatttgaattttcacatccacttatcagagattcaggcaactca
cagagcaggcagttgcttcatcaccggctaaagagaagttgggtatggaaccagttcttt
gttctggaagagtacacagggacagaacctctgtatgtcggcaagcttcattctgatatg
gacaaaggcgaaggatcaatcacatacatcctttcaggtgatggagcaggaactatgttt
acaattgatgaaaccacaggtgatattcatgcaattcaaagactggatcgagaggagaga
tctcagtacaccctcaaagcacaggctctggacagaaggactaccaggcctatggagcca
gaatcagagttcattgtcaagattcaggatataaatgacaatgaacccaagttcctagat
ggtccctacactgcttcagtgccagaaatgtcaccagtgggtacctctattatccaggtg
tcagcaacagatgcagatgatcctacttatggaagcagcgcgagggttgtgtacagcatt
ttgcaaggacagccatatttctctgtggattctaaaacaggtataattagaacagcttta
acaaacatggacagagaatcaagagactactatgaagtgattatccaagccaaagatatg
ggtggacaactggggggcttggctggaactactactgtcaatgttactcttagtgatgtg
aatgataatcctcccagattccctcagaaacactatcaaatgagtgttttggagtctttg
ctaatcaattccactgttggcagagttctggctatggaccttgatgaaggagtcaatgcg
gaaatgaagtacaacattatcgatggggatgaatttgaagtatttgatattgttacagat
cccagtaaccaagttggagttatcacagttaaaaaaccactggactttgaaactaagaaa
agctatacactgaaaattgaaggctctaatgctcatctggaaatacgttttctgaacctc
ggtccattccgtgacactacttctgtgcacattactgtagaagatgtggatgaacctccg
gtttttgggtccagtttttattttgtggaagtctctgagaatgtggatattggtacaaca
atacagattgtttctgcaaaagatccagatgcaactaacaactcagttaggtactctatc
gacaggagcagtgatccaggcagatatttttatgttgatgtcaccactggagcattgatg
actgccaggcctttggacagggaagaagtgtcctggcacaacataactattttagccatg
gaaatgaataaccctgcgcaaataggtggtgtgccagttacaataaaagtcctggatgtt
aatgacaacgctcctacatttactaagttttctgaaacattaatgtgtgaaaatgcaaag
gctgatcagctgattcagaccgttagtgcagtagaccaagatgacccacaagagggtcaa
cacatatcctacagtttagctccagacgcagctaataatccaaatttcactctacgtgac
aaccaagacaacactgcttggattttaaccagaagaccaggcttcaaacagtctgaacag
agcactttttaccttccgcttctgatatcggataatgggaatcccaggctgagcagtact
ggcacactaactatccaagtgtgcagctgtgacaaagatggagatataatgtcttgcaat
gcagaaccatatacattacccatcagtctaagcaggggagcacttatagcgatcctgacc
tgcatttttgtcctattagtcctggtcttacttatcctgtccatgaggaggcacagaaag
cagccgtacactattgatgaagaggataatgtccatgagaacattgttaggtatgatgat
gaaggtggtggagaagaagacactgaggcatttgatattgcagctttgtggaatccaaga
gaagcccacatggggaaaactagacaagacatgaaacctgagattgagagtttatcccgt
tatgtgactcagacgtgtagaatggacaataatgttcacagctacatgttggctaaactc
tatgaagctgatactgatgtctgcgctccaccctttgactccctccagacatatatgttt
gaaggtgagggatctgtggcccattctttaagctcattgcagtcattaagtacagactca
gagcagagctatgactatctatctgactggggtcctcgatttaaaaaacttgcagaaatg
tatggcaccaaggataacaatggctctttgtga
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