Xenopus laevis (African clawed frog): 100301956
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Entry
100301956 CDS
T01010
Symbol
irx4.S, iroquois-4, irx4-a, irx4-b, irxa3, Xiro4
Name
(RefSeq) iroquois-class homeodomain protein irx-4-B
KO
K24889
iroquois-class homeodomain protein IRX
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
100301956 (irx4.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
100301956 (irx4.S)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
SID-1_RNA_chan
Motif
Other DBs
NCBI-GeneID:
100301956
NCBI-ProteinID:
NP_001154863
Xenbase:
XB-GENE-6448215
UniProt:
B7ZRT8
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Position
6S:59275745..59284866
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AA seq
495 aa
AA seq
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MSYPQFGYPYSSTPQFLMTTNSLSTCCESNGRSLSDSAAAASAQTPVYCPVYESRLLATA
RHELNSAAALGVYGSPYTSTQGYGNYVTYGADAPSFYSLNAFESKDGTGSAHAGIPQTAA
YYPYEHTLSQYQYDRYGTMDGSTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAII
TKMTLTQVSTWFANARRRLKKENKMTWPPRNKCSDEKRPYDEEEEEEEDSQKATIKNEKK
TVDEEIHREEKALDLSDLEDFDTIESESSECELKQPFHHQPQDGHQLRQRDCVNDHCKEV
ILKMPITSTATQELDRTKICHKTGLDQCEQDLLRGRQRGGGESKSCFQQQQILDSKPRIW
SLAHTATSLNQTEYPSCMLKHQGLSSPSSSSSSSAVSTPVCVIDRRQDSPVTSLRNWVDG
VFHDPLFRHSTLNQALTNTTVSWATTKGTLIDSGSLGRSVGNSTNVIKGQLPNLPHDTNK
EFIAFQTSGSKMFCS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcctcagtttggctacccatattcctccacacctcagttcttaatgaccacc
aattcactttcgacctgctgcgaatccaatggaaggagtctgtccgactcagccgctgca
gcttcagcccagaccccggtctattgcccagtatacgagagcagattgctggccactgcc
aggcatgagctcaattctgctgcagccttgggtgtctatgggagcccttataccagcacc
caaggctatggaaactatgtaacctatggcgctgacgctccttccttttattccttgaat
gcattcgagtcaaaagatggtacaggatctgcacatgcgggaatcccccaaactgccgct
tactacccctatgagcatacactcagccagtaccaatatgacaggtatggtaccatggat
ggaagcactaggagaaagaatgccacccgtgagaccactagcaccctgaaagcttggctg
caggagcacaggaagaacccgtaccccaccaagggggagaagatcatgctggccataatc
accaagatgaccctcacccaggtctccacgtggtttgccaatgccagaaggaggctaaaa
aaggagaataagatgacctggcctcctagaaacaaatgctcagatgaaaagagaccttat
gatgaagaggaagaagaagaggaagattcccagaaggccaccattaagaacgagaaaaaa
acagttgacgaggaaatacacagggaggagaaagcgctagatctaagtgacctggaggac
tttgacacaattgagtctgaaagttctgagtgtgaactgaaacaaccctttcatcaccag
ccccaagatgggcaccaactgaggcagagagattgtgtcaacgatcactgcaaagaagtg
attctgaagatgccaataacttcaacggccactcaagagttggacaggacaaagatctgc
cataaaaccgggcttgaccaatgtgaacaagatctactaagaggaagacagagaggtggt
ggtgaatctaaatcttgcttccaacaacagcaaattctggattccaaaccaagaatatgg
tccctagcccacacagccacctcattaaatcaaactgagtatccgtcttgcatgttaaag
caccaaggcttgtcttctccttcttcatcttcatcttcttctgcagtctccacaccagtt
tgtgtcattgacagacgtcaggattctccggttactagcctcagaaactgggttgatggt
gtttttcatgatccattgtttagacacagtactttgaaccaggctctcaccaatacaacg
gtttcgtgggccacgaccaaaggaacactgattgactctggctccttgggacgttctgtt
gggaattcaactaatgtgatcaagggacagctgcctaacctaccccatgacacaaataag
gagtttattgcattccaaacgtctggaagcaagatgttctgttcctaa
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