Xenopus laevis (African clawed frog): 100310823
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Entry
100310823 CDS
T01010
Symbol
cdh16.L
Name
(RefSeq) cadherin-16
KO
K06810
cadherin 16, KSP-cadherin
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
100310823 (cdh16.L)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Major cadherins
100310823 (cdh16.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
RET_CLD1
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
100310823
NCBI-ProteinID:
XP_018113493
Xenbase:
XB-GENE-6488994
UniProt:
A0A1L8GL24
A0A974HNZ0
LinkDB
All DBs
Position
4L:complement(61064249..61139065)
Genome browser
AA seq
829 aa
AA seq
DB search
MVGSYHFYFFLLLFILTEITNSSSPPKQYIEVPENYKGSFPWYIGKIILATDGQYNTELA
GNDEEIFGVDPESGFLYALKPFDRERKASYTLQVTRRKVVEEKIVSQMVTIHIIVKDEND
NMPVFTESTFYGIVSKGTKQGVAFMHIKATDLDDPSTPNADLRYKMISHYPARSYENMFN
VDPKTGAISLTEQGVSSLSKLEVRNFKLEVQVKDLGDEPIGYTSGANLEISVAENTWIAE
SPVFLQENQKGGYPRTISEVKWNSTELHYSLEGDFSGELFQIDEDGKIYIMRELDREAQA
EYQIEVSAMNDEGIPYTDHLLIVINVIDENDNTPIFPQDTYHVEVTERTTKGTLLVHLTA
IDADDKNTKNSQIRYKIMHQEPKLPKDFLFHLEEYTGHLTLQDASLKASIAKKYKLEISA
TDLGGDPKGLSSTCSVFIDVIDVNDSPPVFLKNKFAPFLIPEDAQTGMLIITLTATDEDE
QIENKIIDFYIQSGNEDGTFGITTDQELSTMTIFLEKDLDYEQTQEYNLIITARNRAELL
GTEYSPTSTAAIHIMVVNVNEAPVFTQKKYEVRVPESAQTGSVILTVEASDPDIYHQAGL
IYSIRNDSKKCLSIQEHSGKIQLLHSLDREVFEDTYTVQVLVQEKGDRGLSATADVVIHI
LDVNDNIPILVGDYSEEYFCTPRRDNQRIIIRAFDLDSVENSAPFTFTLSNEPTIKSRWR
ITALNGTHAYLSMGISYLEPRVHYVLIIITDSGTPPQSQHVHLPVTVCRCSTRGFCKIDV
EKMENMPTMSSALGILLGTLGAIVFFLVIIFVHMSLGSPSKKSRKSDAV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggttggaagctaccatttttacttctttcttctcctctttattttaactgagatcaca
aattcctcttctccgcctaaacaatatattgaggttcctgaaaattacaaaggatctttt
ccctggtacattggcaagataattcttgcaacagatggtcagtataatacagagcttgct
ggaaatgatgaagaaatatttggagttgatccagagtcaggctttctttatgccctcaaa
ccatttgatcgtgaaaggaaggcatcctatacactccaggtaactcggagaaaagtggtg
gaggagaagattgtatcccagatggttactattcatataatagtaaaagatgagaatgac
aatatgcctgtctttacagaaagcacattctatggaattgtgagcaaaggaacaaagcaa
ggagttgcttttatgcatattaaagcaacagatttagatgatccctccacacccaatgcc
gatttgcgttataaaatgatctctcattaccctgctagatcctatgagaatatgtttaat
gtagatccaaagacgggggcaatctccttaacagagcaaggtgtctcttcattatccaaa
ctggaggtaaggaatttcaaacttgaagtccaggtcaaagatttgggagatgaaccaata
ggatacacctcaggcgcaaacctggaaatcagtgttgcagagaatacctggattgctgaa
agtcctgttttccttcaagagaatcagaaaggtggctaccctcgaaccatctctgaggtg
aagtggaatagcactgaacttcattattctctggaaggagactttagtggagagcttttc
caaattgatgaggatggaaaaatttacatcatgagggaactggatagagaagcacaagca
gagtaccagatcgaggtgtctgctatgaacgatgaaggcattccatacaccgatcattta
ctgatagttatcaatgtcatcgatgaaaatgataatacaccaatcttcccacaggataca
taccatgtagaagttacagaaagaacaacaaaaggtacacttcttgttcatctaacggcc
atagacgctgatgataaaaacacgaagaattcccagataaggtacaaaattatgcaccag
gaaccaaaactaccaaaggatttcttatttcaccttgaggaatatactgggcatttgaca
ctgcaagatgccagcttaaaggcaagtattgccaagaaatacaagctggaaatctcagct
actgatcttgggggagatcctaaaggactgagcagtacctgttccgttttcattgatgtg
atcgatgttaatgacagtcctccagtatttctcaagaacaagtttgctccatttttaatt
ccagaggatgcacagacaggaatgctaatcattacactaacagcaactgacgaagatgaa
caaatagaaaacaaaatcatagacttttatatacagtcaggaaatgaggatggaaccttt
ggaatcacaactgaccaagaactctccacgatgaccatctttcttgaaaaggatctggac
tatgaacaaacacaggaatacaacttgattattaccgcaagaaacagagctgaactgtta
ggaacggaatacagtccaacctcaactgctgctatccatattatggtggtaaatgtgaat
gaggctcctgtatttacccagaagaaatatgaggtcagggtgccagaaagtgcccagact
ggttcagttatacttactgttgaggcttctgatcctgacatataccaccaggcaggctta
atttacagcatcaggaatgattccaagaaatgcctgtccatccaagagcattctgggaag
atccagcttcttcattctttggacagagaagtctttgaagacacatacactgtgcaggtc
ttggtgcaggaaaaaggagaccgcggtctatcagctacagctgatgttgtcattcacatc
ctggatgtcaacgacaatatcccaattttggtgggagactattctgaagaatatttctgc
actccaaggagagacaatcagagaatcatcatcagggcatttgacctggactcagttgaa
aacagtgccccgtttaccttcacactttcaaatgagccgacgattaagtcacgatggaga
ataacagcacttaatgggacacatgcctatttatcaatggggattagttacctggagcct
agggtgcattacgttctaatcatcataactgatagtggaacacccccacaaagtcagcac
gtgcacctccctgtgactgtgtgccggtgcagcaccagggggttttgcaagatagatgtg
gaaaagatggaaaacatgccaacaatgtcatctgctctcggcatcttgctgggaacttta
ggagccatagtttttttcttagttattatcttcgtacacatgtcacttggaagccccagc
aagaagtctagaaaatctgatgctgtttaa
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