Xenopus laevis (African clawed frog): 100316923
Help
Entry
100316923 CDS
T01010
Symbol
rev3l.L, rev3l
Name
(RefSeq) REV3 like, DNA directed polymerase zeta catalytic subunit L homeolog
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100316923 (rev3l.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xla03400
]
100316923 (rev3l.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100316923 (rev3l.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
100316923 (rev3l.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
DNA_pol_B_exo1
REV3_N
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
100316923
NCBI-ProteinID:
NP_001163919
Xenbase:
XB-GENE-6460664
UniProt:
D0VEW8
LinkDB
All DBs
Position
5L:80297064..80402857
Genome browser
AA seq
3139 aa
AA seq
DB search
MFSLRLVTADYYLAAPLPGLDVTRSHFRDSPVRRVPVVRVFGATPAGQRACLHLHGIFPY
LYTPYDGYGQQDPERYLRQIAFSIDRALNVALGNPAASSQHVFKITVVSGVPFYGYHEKE
IQFMKIYLYNPAMVKRVSELLQGGAVMNKCYQPHEAHVPYLLQLFIDYNLYGMNLINLAA
VKFRRAQRKGDSSSHGTGVCKDRDQERSFSSTFVQWQEDEIPSSLILEDVEPISTCELEV
DGVAADIINRQEIEAQIGKNPGLQAIWEDEKQRRREKRESSQISPPDSQDRGYVAMSESE
KILQKRLKEILKQNDFSLTLPNSLDCSNLSEEFSVELTLHSQLDSPDVLCSQANMVDVHR
DEPQRNKGCVGEEQEDAVIDEEAILNVMETSQIFQSQRLSQSPVFLDDNQDQAMVKLLAG
LEEDEYQMDMSRRLSQHSLSARYNSMQNSDDEENEPQVEKEEMELSILMSQRWDNNTEEH
NTKINFKSIEESSSEDDSTDDEMEWSRNRLLLADLSIPQLDGTADENSDNPLNKESTLTH
SSVIAKSKLSLKNSIFHKDAASFEPQSSAKTAFQCQHTSALSSHILKKEGLIEELPQPAE
EKGPELSVHSFTNDSTCNMKYPSSFNNSTCPEVLHEEASKNDIAPVPAIDKTAFEDGIPL
VNRHLQCRKFTSIRKTDKDISFLKITRQLSEGILDRNPRNLTELSNHKMKRSADVGDKCC
SSTPNKIFSGTINESSDFTPPADVSRVMLHTADNAINDVSPNKRKARSEELQQHATDMTS
GNQQATHYKFFPSVVLSNCLNRPQKLAPVTYKVQQCKKQSRLKLVKKKVVENEHTSATAK
DIEDLLGYEGSVEYRENTNLQKQSIVTGIDTIPSPSYQDIVDPINTVGKDSSYAPGNACS
KSPPDVDRVPSCDMAVMMDDGAFQSNACELNAFTCQFEVGATDSEPSLEICGNKYTLRAK
RKVNFESEDGEPVKGATNSKSSLPQPEETMDDVESFQKVHKRRKVSNKLPPVIIKYIIIN
RFKGRKNMQVKLEKLDPSEEQVKLTEDKIKQYNRMAPLKDFWPKVPESPATKYPIFPVIP
KKNNKRKTKQKSAKKKTGRLPKTETKMLQRAVSIRRKRIRSFLSLPMPTYNAETEDCDTD
YKDVMSKLGFLVERCPSPINMSPPRCWSPTDPRAEEIVSIPVAEMPLFKSSLLVDGNKEY
GNSVKKLQKRVQPNKPRKKTSTSPSAIRKQPKKASQSDIGKDGKKQKGKSMSKKSEKAPR
KHIKIKDKKTNAEPRVSEQSSLLHKEQTPSALNGVVQSFPAITTEFSLSGFSTGHVHSTQ
PSKDSTQNDSPGNVSSFTGTPKPLHLQQFSSIQKDCSATASVPLSPGIKTFSINAMNTQF
PNAFQIKECSSTPSKTQNSYTRSPQVIQNAQFTLTSSLMTREDPAEAQKRLLTSIGKLQD
VQNSPSSLVSEKPKLLPCSFNHAGNVADTSKHCDSNTPVISSEKGHEALNSPNSSVLTTL
KSTLKTTAVEQKQKGDSIDAAQFATQRASQNCLPEIFSCTKAIQNSIKSVSPQKLLDAHS
GIAVLKELLHKKQQKVASSSEESTVKLKLSLSSPSEPKSVSGKSATHSKKTRAPRSTKSK
VAKNVKTGMGKHMCDSESKICTSERSPGLFSEPSFESCYSIEDSLSPEHNYNFDINAVGQ
TGLCTLYSGSQFIPADQNLPQKFLSDPFPIPVSDNEGINHELQQSEKKKPYSLGHPLIRP
SSLSPDMFEKSVDFKQNPLLNQWKNCLISQNSHNTHSVDGLYNCQSEDKYRLNRGISLKD
VAFNCAHSEWTQTGTKCQIKNTMFDASHPPNSNSSFTGLLPSPEGDSVSDDLELYLSRHS
GGLTPTPDSSPRSISSPSQSKNGNSTPRPVHILKPLMSPPSREEIMATLLDHDLMETIYQ
EPFFSNPSDAPEKPREVGGRILTIETKLPYNLLEFEGDFSVEGLRFWKTAFSAMTQNPRP
VSPSRVSRLMAERRKDSLDSENDKKLVIMPCKSAPHPQKVQVWLQAKELYETSKIACKDK
EIQEASESNAIKTTSVPVGCNSLPPKEIHILLAQPASSDDLPETANNIKIHLASPPPVLD
SAEPQLIEREFDITASIPASGGRSDQDELLDNSVSPDSPILTPWQDTLSPDNTNPSVDDK
DFKSRGISPSPLLESEAKTEVKNESTDFSVFSPSQVSQGKQKSTHTCIHSTPVVERKPEA
ESSEALLYSPLLSEPVSQRLSQRRGCNPDKLRRVLLTTQMKNQFATMAQVKRETSQIEGP
SLNNSYGFKVSVQNLQDAKALHEVQHLTLMCMELHARTRRDLEPDPEFDPICALFYCISS
DSLLSNTNKRQVTGAIVIHLEEANSDGGRRQTPFLARSGITGFEVTYATDEKQLFVMLLS
LVRRFDPDILLGYEVQMHSWGYLLQRASALNVDLCQQLSRVPDDKNENRFSSEKDEYGAD
TMSEINIVGRIVLNVWRMMRSEAALTNYTFENVAFHILHQRFPLFTFRSLSDWFDNRKDV
LRWKMADYYMSRVHGTLQLLEKLDLIGRTSELARLFGIQFLHVLTRGSQYRVESMMLRIA
KPMNYIPLTPSIQQRSQMRAPQCIPLVMEPESRFYSNCILVLDFQSLYPSIVIAYNYCYS
TCLGNVENLGKYEDFKFGCSSLQVPPDLLYQLRNDITVSPNGVAFVKACVRKGVLPRMLE
EILKTRIMVKQSMKNYKQDKSLTRLLDARQLGLKLIANVTFGYTAANFSGRMPCVEIGDS
IIHKARETLERAIKLVNDTKKWGAKVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTAT
NPKPIKLKFEKVYLPCVLQTKKRYVGYMYETVDQKDPVFDAKGIETVRRDACPAVGKILE
RSLKLLFETRDISQIKQYVQRQCIKVVEGKASMQDLIFAKEYRGSFAYKPGACVPALELT
RKMVAYDRRSEPRVSERVPYVIIYGSPGVPLIQLVRRPIDVLQDHNLRINGTYYITKQIL
PPLNRIFSLIGVDVFSWYDELPRIQKTFSTARNEQDARKCTISQYFTTLHCPVCDELTQH
GICSKCRSQPQNVVVILNQEIRELEYKQDQLAKLCRNCTGCSNQQIQCVSLNCPVLFKLS
RVSRELCKAPYLRQLLDQF
NT seq
9420 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgctgcgccttgtcacggcggattattatttggctgccccgttgccagggctg
gatgtaacaaggtcccacttcagagacagtccggtgaggagagtgccagtggtgagggtg
ttcggagccacccctgcaggtcagagggcttgcctgcatcttcatggtattttcccttac
ctgtatactccatatgatggatacggacagcaggatcctgaacgttaccttcgtcagata
gctttcagcattgacagagcacttaatgtggctttaggcaaccctgcagccagttcccaa
catgtatttaagattacagtcgtttctggagtgccattctatggttatcatgaaaaagaa
atacagtttatgaagatctatctctacaatccagcaatggtgaaacgggtcagtgaactt
ttacaaggaggtgctgtaatgaataagtgctatcaaccccatgaggcccatgttccttat
cttcttcagctattcattgattataatttatatggaatgaacttaatcaatcttgctgct
gtaaagttcagaagagctcagaggaaaggagatagctcatcacatggtacaggtgtgtgt
aaagatagggaccaagaaagatcattttcttctacttttgtccaatggcaagaagatgaa
ataccaagctctttgattttggaagatgtggagccaataagtacctgtgaattagaagta
gatggcgtagctgctgatattataaaccgacaagaaattgaagctcagataggaaagaat
cctggactgcaagcaatatgggaagatgaaaaacagcgccgtagagaaaagagagagtcc
tcacaaataagccctccagattctcaagatcgtgggtatgttgcaatgtcagaaagtgaa
aaaatccttcagaagagacttaaagaaatcctgaaacaaaatgacttctcattgacacta
ccgaattctctagactgtagtaacttatctgaggaattctctgtggaacttacattgcac
tcccagctagattcacctgatgttctttgttcacaagcaaatatggtggatgttcacagg
gacgaaccacaaaggaacaaaggatgtgttggtgaagagcaagaggacgctgtcattgat
gaggaagccattttaaacgtcatggaaaccagtcaaattttccagtcacagagactgagt
cagtctcctgttttcttggacgacaaccaagatcaagccatggttaaattgttagctggt
cttgaagaggatgagtaccagatggacatgtccagacggttatcacagcactctttatct
gcaagatacaacagtatgcagaatagtgatgatgaagagaatgagccacaggtggaaaag
gaggaaatggagctcagcatattaatgtctcagagatgggacaacaacactgaagaacat
aataccaaaataaattttaagagtatcgaagaaagctcttctgaagatgactccacagat
gatgaaatggaatggagtagaaaccggctgcttttagctgatctttctatacctcagtta
gatggcacagcagatgaaaacagtgataaccctctgaataaggaaagcacccttacccat
tcttccgttattgcaaaaagcaagttatctctaaagaattcaatctttcacaaagatgct
gcttccttcgaaccacagtcttctgctaaaacagcctttcagtgtcaacacacaagtgcc
ctttcgtctcatattctgaaaaaagaaggtctgatagaagagcttccacagccagctgaa
gaaaagggacctgaactttctgtccattctttcacaaatgatagcacttgcaatatgaaa
tacccatcatcttttaataattctacatgtccagaagttctacatgaagaagcaagcaag
aatgatattgctccagttccagcaattgacaagacagcatttgaagatggcatcccatta
gtgaatagacatttgcaatgcagaaaattcacaagtattagaaagaccgataaggacata
tcttttttaaaaataactcgccaacttagcgaaggcatattggatcggaatcctagaaat
ctcacagagcttagtaatcataaaatgaaaaggtctgcagacgtcggtgataaatgctgc
agttctactccaaacaaaattttttctggaactattaatgaaagcagtgacttcacacct
cctgctgatgttagcagagtcatgctgcacactgcagataatgccataaatgatgtaagc
ccaaataagcgtaaggctagatctgaagagcttcaacaacatgcaacagacatgaccagt
ggtaatcagcaggcaacacattataagttttttccaagtgttgtcctttcaaactgttta
aaccgtccccaaaaacttgccccagtaacttataaggttcagcaatgtaaaaaacagtca
agattgaaactggttaaaaaaaaagttgtcgaaaatgagcacaccagtgctactgcaaaa
gatattgaggaccttttaggttatgaagggtctgtagaataccgtgaaaatacaaatctt
caaaaacagagtatagttacaggtatagatacaataccaagcccttcataccaggatatt
gtagatcctataaacacagttggaaaggacagcagttatgcccctggcaatgcatgtagt
aaaagtcctcctgatgttgacagagtaccatcatgcgatatggcagtaatgatggatgac
ggtgcatttcaaagtaatgcttgtgaactgaacgcttttacttgtcagtttgaggtaggg
gctacagattcagaaccatccttggaaatctgtggaaataaatacactttaagagcaaaa
cggaaagtcaattttgaaagtgaagatggggagccagttaagggtgcaacaaactcaaaa
tcaagcctacctcagcctgaggaaaccatggatgatgtagagagttttcaaaaagtgcac
aagcgcagaaaagtttctaataagttaccaccagtaattatcaagtacatcataattaat
agatttaaagggagaaaaaacatgcaagtgaaactggaaaaactagatcccagtgaggaa
caggtcaaattaacagaggataagataaaacaatataacagaatggcacctttaaaggat
ttctggcccaaagtgccagaatctcctgcaaccaaatacccaatatttccagtaatacca
aagaagaataacaaacgaaaaacaaagcaaaaatctgcaaagaaaaaaactggtagacta
cctaaaacagaaacaaaaatgttgcagagggctgtgtctatacggagaaaaagaatacgt
tcttttttatcacttcctatgccaacatataatgctgaaacagaagactgtgacacagac
tacaaagatgtaatgtcaaaacttggttttcttgtggaaagatgtccaagccccataaat
atgtctccacctcgttgttggtcacccactgacccaagagctgaagaaattgtgtcaatt
ccagttgcagaaatgcctctttttaaaagttcacttttagtagatggtaataaagaatat
ggtaattcagtgaaaaagctgcaaaagagagttcagccaaacaaacctagaaaaaagaca
tcaactagtccttctgcaattaggaaacagccaaaaaaagccagccagtctgatataggc
aaagatgggaaaaagcagaaaggcaagtcaatgtccaaaaaaagtgaaaaggctccaaga
aagcacataaaaattaaagataaaaaaactaacgctgaacccagagtttctgaacaatct
tctctgttgcataaagaacaaactccatctgctttaaatggagttgtgcagtcatttcca
gccatcacaacagagttcagtttatctggattttctacagggcatgtgcactcaacgcaa
ccttcaaaagatagtactcagaatgattcacctgggaatgtaagttctttcacaggaacc
ccaaaaccactacatttgcagcaattttcaagtattcagaaagactgctcagcaacagca
tctgtaccattaagcccaggtatcaaaacatttagtattaatgcaatgaacactcaattt
cctaatgcatttcaaataaaggagtgtagctcaactccaagcaaaacccaaaattcatat
acccgttcacctcaggtaatacaaaatgcacagttcactttaactagctcacttatgact
cgagaagatcctgcagaagcccagaaaaggctgttgacatctattggcaaacttcaagat
gttcagaattccccaagttctctggtctctgaaaagccaaagcttttaccatgttcattt
aatcatgctggaaatgtagctgatacatctaagcactgtgattcaaacacgccagtcata
tcttcagagaaaggccatgaagcacttaattcaccaaacagttctgttctgacaactttg
aaaagcactcttaaaacaacagcagtagaacaaaagcaaaaaggggatagcattgatgct
gctcaatttgccactcagagagcgagtcaaaattgtttaccagaaattttctcctgcaca
aaagctattcagaatagtataaagtctgtttccccacagaaacttcttgatgcacattct
ggaatagctgtccttaaggaattgcttcataaaaaacaacagaaggtagcatcaagcagt
gaagagtcaactgttaagcttaaattgagcttatctagtccatctgagccaaagagtgta
agtggaaagtctgcaacacatagtaaaaaaacaagggccccaagaagcacaaaatctaag
gtggctaagaatgttaaaactggcatgggaaaacatatgtgtgattctgagagcaaaatc
tgtacatctgaaagaagccctggacttttttctgaacctagctttgaaagctgctactca
attgaagacagtttgtcacctgagcataactacaactttgatattaatgctgtaggtcag
actggtctttgtaccttatactctgggagccagtttattccagcagatcaaaatttacca
caaaaatttttgagtgatccttttcctattcctgtctcggataatgaaggtataaatcat
gagttacaacagtcagagaagaagaaaccctattccttagggcatccgctgataagacca
agttcgcttagcccagatatgtttgaaaaatctgttgactttaaacaaaaccctctccta
aaccagtggaaaaattgcttaatttctcaaaatagccataatacacactcagtcgatggg
ctttataactgtcagtcagaagacaaatacaggttaaacagaggcattagtctaaaagat
gttgcgtttaactgtgctcactctgaatggactcaaactgggactaaatgccaaattaaa
aacacaatgtttgatgcatcccatccccctaactccaattcctcatttacagggctttta
ccttcaccagaaggtgatagtgtttctgatgatttagaattatatttatcaagacacagt
gggggactaactccaactcctgacagttctccaagatccattagttccccatcacagtcc
aaaaatggaaattctacaccacgaccagtgcacatattaaaacctctcatgtcaccccca
agtcgtgaggaaataatggcaactttgttggaccacgaccttatggaaactatttaccaa
gaaccattttttagcaatccttccgatgcgccagaaaaaccaagagaggttggtgggaga
attctcacaatagaaacaaaattgccatataatcttcttgagtttgaaggcgacttttca
gtggagggacttcggttctggaagactgcattttcagcaatgacacaaaaccctagacct
gtttcaccatctcgggtgagccgcctgatggctgaaagaagaaaggatagtcttgattct
gaaaatgataaaaaactagtgatcatgccatgtaaaagtgctccacatccacaaaaagtt
caagtgtggcttcaagccaaagaactgtatgagacatctaagattgcatgcaaagataaa
gaaattcaagaagcaagtgaaagcaatgctattaaaaccacttctgtgcctgttggttgt
aacagcttgcctccaaaggaaatccatattttattggcacagccagcaagttctgatgat
ctaccagagactgctaataatataaaaattcatctagccagtccccctcctgtacttgac
agtgcagaacctcagcttattgaaagggaatttgatattaccgcatccattcctgcctca
ggtggcaggagtgatcaagatgaattgttggacaattctgtttcacctgattctccaatt
ctgactccttggcaagatactctttctcctgataatacaaatccatcagtagatgacaag
gattttaaaagtagaggtatttccccatcgccacttttggagagtgaagcaaaaactgaa
gtgaaaaatgaatccacagatttctctgtcttttctccttctcaagtttcgcagggcaag
cagaaatccacacacacctgcattcacagtacacctgtcgtagaaagaaagcctgaagca
gagtcctctgaagctctcctgtacagtcctttgttatcagaacccgtatcccaaagattg
agccagaggagaggatgcaatccagataaacttcgaagagtactcctaacaactcagatg
aagaatcagtttgctactatggctcaggtgaaaagggaaacatctcagattgaggggcca
tctctaaataactcatatggctttaaagtcagtgttcaaaaccttcaggatgcaaaagcg
ttacatgaggtgcaacatttaacacttatgtgcatggagttacatgcaagaacacgaaga
gacttggaacctgatccagaatttgaccccatatgtgctctattctactgcatctcatca
gactccttattgtcaaacaccaacaaaagacaagttactggtgctattgtaattcatctt
gaagaagctaatagtgatggtggtagaagacaaacgccatttcttgccagatctggcatt
acaggctttgaagttacatatgcaacggatgagaaacagctgtttgtgatgttgttaagc
cttgtcagaaggtttgaccctgacattttattgggatatgaagtccaaatgcattcttgg
ggttatctcttgcagagggcatctgcattaaatgtagatctgtgccagcagctttccagg
gtgccagatgataagaatgagaacagattttcatcagaaaaggatgaatatggagcagat
accatgagtgaaatcaacatagttggtcggattgtactaaatgtttggaggatgatgaga
agtgaggcggcattgaccaactatacttttgaaaatgtggcatttcatatccttcatcaa
agatttccattgtttacttttcgatccttatcagattggtttgataacagaaaagatgtg
ctcagatggaagatggccgattattacatgagtcgagtacatggaactctgcagttatta
gagaagttggacctgattgggagaactagtgaacttgcaagactttttgggattcagttt
ttacatgtcctaacaagagggtcacagtaccgtgttgagtcaatgatgcttcgcattgca
aagccaatgaattacatacctttgactccaagtatccaacagcgatctcaaatgagagct
ccccaatgtattcctctcgtcatggagccagaatctcgattttacagcaactgcattttg
gtgctggatttccagtcattgtacccatcgattgtaattgcatataattattgttactct
acttgtctgggaaacgttgagaacctggggaaatatgaagacttcaaatttggctgctca
tctcttcaagttcctcctgatctattgtaccagctacgaaatgatatcacagtatctccc
aatggagttgcatttgtaaaggcatgtgtcagaaaaggggtgctaccgaggatgcttgaa
gagatactaaagacacggataatggtgaaacagtcaatgaaaaattataaacaagataaa
agccttacacgactgcttgatgctcgccaactgggtctcaaattaattgccaatgttaca
tttggctatactgctgctaacttctctgggaggatgccatgcgtggagattggagacagt
attatccacaaagcacgggagactttggaacgtgctataaagcttgtcaatgacacaaag
aaatggggagcaaaggtcgtctatggggatacagacagcatgtttgtgttgctgaaaggg
gctacaaaggaacagtccttcaagattggacaggaaattgccgaagctgtaaccgccact
aacccaaaacctataaaactgaagtttgaaaaggtttatttgccctgtgtcttgcaaaca
aagaaaagatatgttggttatatgtatgaaacagttgaccaaaaggatcctgtttttgat
gccaagggaattgaaacagtccgaagagatgcttgccctgctgttggaaagattcttgaa
cgttcactgaagctgctatttgaaaccagagatataagtcaaatcaaacaatatgtccag
agacaatgtataaaggttgttgaaggcaaagccagtatgcaggacctcatttttgccaag
gaatacagaggaagcttcgcctataagcctggcgcctgtgtcccagcattagaacttaca
aggaaaatggtggcctatgaccggcgctctgagcctcgcgttagtgaaagagtcccttat
gtaataatatatggcagccccggtgtccctcttattcagcttgtgagacggcccattgat
gttcttcaggatcataatcttagaataaatggcacctactatatcaccaaacaaatccta
ccaccattgaatcgaatcttctctttaattggagtggacgttttcagttggtatgatgaa
ctaccaaggatacaaaagactttctcgactgcaagaaacgagcaagatgccagaaagtgc
acaatctctcagtatttcactactttacactgtccagtttgtgatgaactgacacaacat
ggaatctgcagcaagtgcagaagtcagccacaaaatgttgtagtgattcttaatcaagaa
atcagagaactagaatataaacaagaccagcttgctaaattatgcagaaattgcactggc
tgctccaaccaacagatccagtgcgtttccctcaattgtccggtacttttcaagctctcc
agagtgagccgggagctgtgtaaggccccctacctacgccagctgctcgaccagttctga
DBGET
integrated database retrieval system
