Xenopus laevis (African clawed frog): 100327240
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Entry
100327240 CDS
T01010
Symbol
fanci.L, fanci
Name
(RefSeq) FA complementation group I L homeolog
KO
K10895
fanconi anemia group I protein
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100327240 (fanci.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xla03400
]
100327240 (fanci.L)
DNA repair and recombination proteins [BR:
xla03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
100327240 (fanci.L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
YGL041W_C
Nab2
Motif
Other DBs
NCBI-GeneID:
100327240
NCBI-ProteinID:
NP_001164682
Xenbase:
XB-GENE-6462216
UniProt:
D2JYR7
LinkDB
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Position
3L:115058787..115110328
Genome browser
AA seq
1337 aa
AA seq
DB search
MDQKILSLAAEEQNDGLQSYLQNLKETELSEIITKHAVKGKDCGALLRGVFKGSPCSHDV
AVRRRLAVYRHCIQLVESGDLQREVASEIMGLLMLEVHHFPGASLIELANLFADAVKAGT
LSNGKSLDLFPTVLTALSSKESLAYGKGELTGEEFKKQLINSLCSSRWDPQSVIFLTSMF
RDVSLSAEELQFVVEKVLRMLSKLDLQEMPPLVYQLLLLSAKGSKKNIVEGIITIFNDLD
QKQLVQQENSESLDLEDATIPQDQLHHVEGTIILHIVFAIKLDQELGRELLKYLKAGQQG
DSSKILCPFSAALLLSVSRIHRFQEQVFDFLKSTILRDYKDLQFHQSSKFLQDLVPQPVC
VSSILLETVKNSVYGWDHVTQGLVELGFILMDSFGPKAAFGNKVVELISVHSRTPSQQAC
QLGSRILLETFKVHEPIRSEILEQVLNRVITKAATPVTHFIDLLSDIVVSAPLILQNSSS
KVTEAFDHLSFLPLTTVQGLLKAVQPLLKISMSMRDSLILVLRKAMFSSQIDARKSAVAG
FLLLLRNFKVLGSLSSSQCSQAIGASQIQVDVHMRYNAAANEAFCLEILGSLRRCLSQQA
DVRLMLYEGFYDVLRRNSQLASSVMQTLLSQLKRYYEPEPDLLPPLKLEGCITAQGDHIF
LQEPLAHLLCCIHHCLQWYKSSLQQHRNPDEDDDDDDQTGCQQDLNDIMESITRRMIKCD
LEDFELDKSADFSLASGVGVKNNIYAVLVMGICEVLIEYNFIIANFSKSKFEDILGLFKC
CSKLSDILKEKAAKGRQPGNNKTARSLISMTFVSTLLTALFRDSTRSHEESLSILRANVD
FMRYSVCVALQKIQQLEETGVTDGPDGQNSEKMFRSLCEITRVLMWRYTSIPAAAENPGK
KDKGKTISLLCLEGLLRVFNTVQQRYPSKIPQFLTALDALGDEDEEGSREINVTEKAAFQ
IKQFQRSLINQLSGGEDDFNSKEALLLVSILSTLSRLLAPSSQQFVQMLSWTVKICKETN
IEDVQFCKGIMNLLFSLHVQFKSPVSVLRELCQDIHGHLGDIDQDIEVEKQSHFATVSLK
TAAPTVTLLVLGQAAKVLEEVDWLIIKLKGLLGSEKLSTEDLTQTSNARVPIEKAIILQL
GTLLTACHELVQTALPAGSCTDTLLKELAKMYTILTSVVKYYLQICSSHGGQISARLEKL
VKLSGSHLTPQCYAFITYVQNIHSESLSLAAEKKKKKKEEALTVTSAKILRDTKPIPNLI
FAIEQYEKFLIHLSKKSKVNLMQYMKLSTSRDFRINAATLDAALQEKGSEDEENEPDNEQ
AVTEEESQEPKKKRRRK
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaaaaattctgtctttggctgctgaagaacaaaatgatggacttcagagttat
cttcaaaacctgaaagaaaccgagctttcagaaatcataacaaagcatgcagttaaggga
aaagactgtggagcgctattgcgaggcgtctttaaagggtctccgtgctctcatgatgta
gccgtacgccgaaggctcgcggtttatagacactgcatacagcttgttgagtccggggac
ttgcaacgagaggttgcatctgagattatgggtttattaatgctggaggtccatcatttt
ccgggtgcttcgctcattgaactggctaacttatttgcggatgctgttaaagctggtact
ctgtccaatggaaaatctttagatttgtttcccacagtacttactgcgctttcttcaaaa
gaaagcttagcatatggtaaaggtgaacttactggagaggaatttaagaaacaacttata
aatagcctttgttctagcagatgggatccacagagtgtgatttttcttacttcaatgttt
agggatgtttccttgagtgccgaagagctgcagtttgttgtggaaaaggttttaaggatg
ctttctaagttagacctccaggaaatgccccccttagtttaccaattgctactcctgtct
gctaagggtagtaaaaagaatattgtggaaggaattatcactatatttaatgatcttgat
cagaagcagttagtacagcaagagaactctgaatcattagacttggaagatgcaaccatc
ccacaagaccagctgcaccacgtggagggcacaatcattttacacatcgtttttgcaatt
aagttggaccaggaattaggaagagagcttctgaagtatctcaaggctggccaacaaggg
gactcaagcaagatcctttgccctttcagtgctgccctcttgttatctgtatcaaggatt
catagattccaagaacaggtatttgattttctcaaatctactatactgagagattataaa
gaccttcagtttcatcaaagctcaaaattccttcaggacttagttccccagcctgtatgc
gtatcttcaattcttctggaaactgttaaaaacagtgtttatggatgggaccatgtcact
caagggcttgtggaacttggttttattttaatggattcttttggacccaaagcagccttt
ggaaataaagtggttgagcttatttccgtgcattccaggacaccttcccagcaagcttgt
cagcttggatctagaatcttgctagaaacttttaaggtccatgagcctatcagaagtgaa
attctggagcaggtcttgaatcgtgttatcacaaaagctgcaactccagttacacatttt
atagatcttttatcagatattgtggtttctgctccgctcatccttcagaattcatcatct
aaagttactgaagcatttgaccacttgtccttcctgcctcttacaactgttcaggggctc
ctgaaagctgtgcagccccttcttaaaatcagtatgtccatgagggattcccttattctt
gttctaagaaaagccatgttctcaagtcaaatagatgcaagaaagtcggctgtcgctggg
tttcttctcctactgaggaactttaaagtcttaggaagtctgtcctcatctcagtgcagc
caagctattggtgctagccagatccaggtggatgtccatatgcgttacaatgctgcagca
aatgaggccttttgtctggaaatccttggcagtctgaggaggtgcttaagccagcaagca
gatgttaggctcatgctttacgagggtttctatgatgtcctgcgacgaaattcccagctt
gccagttctgtcatgcagactctgttgtctcagttaaagcgatattatgaacccgaacct
gatcttttgccaccattgaagttggagggctgtattactgctcaaggggatcatatattt
ttgcaggaacctctggctcacctgttgtgctgtatccaccattgcttgcagtggtataag
agcagtttacagcagcataggaatcctgatgaagatgatgacgatgatgaccaaacggga
tgtcaacaggaccttaatgatataatggagtccatcacaaggagaatgattaaatgtgac
ctggaggactttgaattagacaagtctgcagacttttctttggcgtctggtgttggagtg
aaaaataacatatatgctgttttggtaatggggatttgtgaagtcctaatagaatacaac
tttatcattgcaaatttcagcaagagcaaatttgaggacattttgggcctgtttaagtgc
tgcagcaaactgtccgatatcttaaaggagaaagctgctaaaggcagacagcctgggaac
aataaaacggccagaagcctcatatcaatgacttttgtttctacactcttaactgcttta
ttcagagacagcacacgctcgcacgaggagagtctttctattcttcgcgcaaatgtggat
ttcatgcgctattcggtgtgtgttgcccttcaaaaaattcagcagcttgaagaaactggt
gtcacagatggacctgatggacagaacagcgagaaaatgttccgaagtctatgtgaaatt
accagggtacttatgtggagatacacctcaattccagctgcagctgagaatcctgggaag
aaggacaaaggcaaaaccatttccttgctgtgcctggagggattgctgagagtgtttaac
accgttcagcaacgatatccatcaaagatcccacaattccttactgcgttggatgcccta
ggggatgaggatgaagaaggctcaagagaaatcaatgtgaccgagaaggcagcttttcag
attaaacagtttcaaagatctcttattaaccaactcagtggtggagaggatgactttaac
agcaaagaagctctactgttagtcagcatcttgtctacattatccaggttactggccccc
tcttctcaacagttcgtgcagatgctgtcttggactgttaaaatctgtaaagagacaaac
attgaggatgtccagttttgcaagggaataatgaaccttctctttagcctccatgttcag
ttcaagagcccagtgagtgtgcttcgagaactgtgccaggacatccatgggcatctgggt
gatattgatcaggatattgaagtggagaagcagtctcattttgctactgtaagtctcaag
actgcagccccgactgttactttgttggttctgggtcaagctgcaaaggtcctggaagaa
gtggactggctgatcataaagctgaaaggactactgggttcagagaagctctctacggaa
gatttaactcagacttcaaatgcaagggttccaatagaaaaagctatcattcttcagttg
ggcacactgctgactgcctgccatgagttagtgcagactgctctacctgctgggagttgt
actgacactcttctgaaggagctggcaaagatgtacaccatcctcacgtccgttgtcaaa
tactacttacagatctgcagcagtcacgggggacagatttctgctcggttggagaagctg
gtgaagctttcgggttctcatcttaccccacaatgttatgccttcatcacatatgtacag
aacatccacagtgaaagtctaagccttgctgcagaaaagaagaagaaaaagaaggaagag
gcattgactgtcacctcagccaaaatcctgcgcgatactaagcccataccaaacctgatc
tttgccattgaacagtatgagaagtttctcattcatctctccaagaagtccaaggtgaac
ttgatgcaatacatgaagctgagcacctcaagggacttcaggataaatgcagccacacta
gacgcagctttacaagagaaagggtctgaagatgaagagaatgagccagataatgaacag
gctgtaacagaagaagaaagtcaagaaccaaagaagaagaggcgcagaaaataa
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integrated database retrieval system
