KEGG   Xenopus laevis (African clawed frog): 100337580
Entry
100337580         CDS       T01010                                 
Symbol
pcdh7.L, NFPC, pcdh7
Name
(RefSeq) protocadherin 7 L homeolog precursor
  KO
K16498  protocadherin delta 1
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    100337580 (pcdh7.L)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xla01009]
    100337580 (pcdh7.L)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:xla04515]
    100337580 (pcdh7.L)
Protein phosphatases and associated proteins [BR:xla01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100337580 (pcdh7.L)
Cell adhesion molecules [BR:xla04515]
 Cadherins
  Protocadherins
   100337580 (pcdh7.L)
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_2 Cadherin_CELSR2_9th Mid2 LYRIC TMEM154 KIAA1549 Fibulin_C MLANA EphA2_TM DNER_C
Other DBs
NCBI-GeneID: 100337580
NCBI-ProteinID: NP_001165662
Xenbase: XB-GENE-1007361
UniProt: O57537
LinkDB
Position
1L:35137379..35662874
AA seq 1035 aa
MMRTEGTQSCWSSWLLMLLHISLTVAATKQLLKYRIAEEGPADVRIGNVAKEIGIVKGSG
DVTFSLESGSDYFKIDNVTGELSTTERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQS
WVELFEGRVVILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERYEL
IQDAGESLYVSGRRGAPESGLYPGKRRMESDGRSSVFELQVADTSDGEKQPQLIVKGPLD
REQRDSYELLRVRDGGEPPRSSQSILRVLITDVNDNSPRFEKSVYEADLAENSAPGTPIL
QLRAADYDVGVNGQIEYVFGAATESVRRLLRLDENSGWLSVLHRIDREEVNQLRFTVMAR
DRGQPPKTDKATVVLNIKDENDNVPLIDIRKIGRIPVKDGMANVAEDVLVDTPIALVQVS
DRDQGENGVVTCTVVGDVPFQLKPASDGEGEQNKKKYFLHTSAPLDYENVKEYNVIIVAV
DSGSPSLSSNNSLLVKVGDTNDNPPVFSQAAVEVAFPENNVLGERVATVLATDADSGKNA
EIAYSLEPPMDGIFSIHPDTGDITVNIILDREQTDRYEFRVVAKDKGIPVLQGATSVVVQ
VADRNDNEPKFMQDVFTFYVKENLQPNSPVGMVTVMDSDKGRNAEMSLFIEEDSDIFSIE
NETGTIYSTVSFDREHQTSYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPSISIPINT
SYAVLSPASNVRTVVASVVATDSDNGVNADLNYSIVGGNPYKLFEIDSTSGVVSLVGKLT
SKHYGLHRLVVQVNDSGQPPQSTIALVHVFVNETISNATVVDFQIARSLHTPLTQDIAGD
PSYDMSKQRLSIVIGVVAGIMTVILIILVVVMARYCRAKSKNGYEAGKKDHEDFFTPQQH
DKSKKPKKDKKNKKSKQPLYSSIVTVEASKPNGQRYDSVNEKLSDSPSMGRYRTVNGGPG
SPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGAGDNISIGSDHCSEYS
CQTNNKYSKQSHFLF
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgatgaggactgaggggacacagagttgctggagctcgtggctgctgatgctgcttcac
atttcactgactgtggccgccaccaaacagctgctcaagtaccggatcgcggaggaagga
ccggccgatgtgcggatcggtaacgtggccaaagagatcgggatagtgaaaggctccggg
gacgtgaccttcagcctggagtccggttccgattactttaagatcgacaacgtgaccggg
gaactgagcaccacggagcggcggatagaccgggagaagctgcagcagtgtcagatgatc
ttcgacgagaacgagtgtttcatagactttgaggtgtcggtgatcgggccggcgcagagc
tgggtggagctgttcgagggcagggtggtcatcctggacattaacgataacaccccgacc
ttcccgtcccccgtgctcaccctcaccgtggaggagaaccggcccgtggggactctgtac
ctgctgcccaccgccaccgaccgcgacttcggccgcaacgggatagagcgctacgagctg
atccaggacgccggggagagtctgtatgtgtccggccgaaggggggcgccagagagtggc
ctgtacccgggcaagaggaggatggagtcggacggcaggagcagcgtgtttgagctgcaa
gtggccgacacctcggatggggagaagcagccgcagctcattgtcaaggggccgctggac
cgggagcagagggattcctatgagctcctgcgggtaagagatgggggagaacctcctcga
tcgtcccagtccattctcagggtcctcatcaccgatgtcaacgacaacagcccccggttc
gagaagagcgtgtacgaggccgacctggcagagaacagcgccccgggcacccctatcctg
cagctcagagccgccgactacgacgtaggggtgaacggtcagatcgagtacgtgttcggg
gcagcgaccgagtcggtaaggagacttctcaggctggacgagaactccggttggctcagc
gtcctgcaccggatagaccgggaggaagtcaatcagctgagattcaccgtcatggccaga
gacagggggcagccccccaaaaccgacaaggccacggtggtgctgaatataaaggatgag
aatgataacgtgcccctcatagacatcaggaagatcggcaggatcccagtgaaggacgga
atggccaatgtggccgaggatgtgctggtagatacccctatagctctggtgcaggtttcc
gacagggaccagggggagaacggagtggtcacgtgcactgtagtcggcgacgtcccgttc
cagctgaaacccgcgagtgacggggagggggagcagaacaagaagaagtatttcctgcac
acctcggcccccctggactatgagaacgttaaggaatacaatgtcatcatcgtggccgtg
gattcggggagccccagcctgtccagcaacaactccctcctcgtcaaagtgggggacacc
aacgacaaccccccggtgttcagccaagcggcggtggaagtggctttccctgagaacaac
gtactgggagagcgagtggccacagtcctggcaacagacgccgacagcggcaaaaacgcc
gagatcgcttattccctggagcctcctatggacgggatcttctccattcaccccgacacc
ggcgatatcacagtcaatatcatcctggaccgggagcagacggacaggtacgagttcaga
gtggtcgccaaagacaagggcatcccngtcctgcagggggcgacctcagtggtggtgcaa
gtggccgacagaaacgacaacgagcccaagttcatgcaggacgtgttcactttctacgtg
aaggaaaacttgcagcccaacagcccagtgggaatggtgaccgtgatggactcggacaaa
ggtcgcaatgcagagatgagtttatttatcgaggaggacagcgatatcttctccatagag
aacgaaacggggaccatctactccaccgtctcctttgacagggagcaccagaccagctac
acgtttagggtgaaagcagtagatggtggagaccctccaagatcagccactgccaccgtg
tccctgtttgtgatggatgagaatgacaatgccccttccattagtatcccaattaacact
tcctatgctgtgctgtcccctgccagcaacgtgagaacggtggtggcctcagtagtggca
accgacagtgacaatggagtcaatgctgatctcaactacagcatcgtaggggggaatccc
tataagctcttcgaaattgactccaccagcggagtggtgtctttggttggcaagctcacc
tctaagcattatgggctgcaccgactagtagtgcaagtgaatgatagcgggcaacccccc
cagtcgacaatagccctggtgcacgtgttcgtcaatgaaaccatctccaatgccacagtg
gtcgacttccaaattgccagaagtttgcataccccattaacccaggatatcgctggagac
cccagctatgacatgagcaagcagagactgagcatagtcataggagtggtggctggcatc
atgactgtcattctgatcatactggtggtggtcatggcccgttactgtcgtgccaaaagc
aagaatggctacgaagccggcaaaaaggaccacgaggacttcttcaccccccagcagcac
gataagtctaaaaaacccaaaaaggacaagaaaaataagaagtccaagcagcccctgtac
agcagcatagtcacagtggaggcttctaagccaaacggacagagatatgacagtgtcaat
gagaaactgtcggacagccccagcatgggaaggtacagaactgtcaatggaggtccaggt
agccctgatctcgccaggcattacaaatccagctccccgctgcctactgtacagctccac
cctcagtcgcctactgctggcaaaaaacaccaggctgtgcaagacttacccccggccaat
acttttgtaggagctggagacaacatctcaattggatcagatcactgttccgagtatagc
tgtcaaaccaacaacaagtacagcaaacagtcgcattttttattttga

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