Xenopus laevis (African clawed frog): 100337592
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Entry
100337592 CDS
T01010
Symbol
tuba1c.L, tuba3e, tuba4, tuba6
Name
(RefSeq) tubulin alpha 1c L homeolog
KO
K07374
tubulin alpha
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04145
Phagosome
xla04210
Apoptosis
xla04517
IgSF CAM signaling
xla04530
Tight junction
xla04540
Gap junction
xla04814
Motor proteins
xla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100337592 (tuba1c.L)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100337592 (tuba1c.L)
09143 Cell growth and death
04210 Apoptosis
100337592 (tuba1c.L)
09144 Cellular community - eukaryotes
04530 Tight junction
100337592 (tuba1c.L)
04540 Gap junction
100337592 (tuba1c.L)
09142 Cell motility
04814 Motor proteins
100337592 (tuba1c.L)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100337592 (tuba1c.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
100337592 (tuba1c.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
100337592 (tuba1c.L)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xla04812
]
100337592 (tuba1c.L)
04147 Exosome [BR:
xla04147
]
100337592 (tuba1c.L)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100337592 (tuba1c.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
100337592 (tuba1c.L)
Cytoskeleton proteins [BR:
xla04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
100337592 (tuba1c.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100337592 (tuba1c.L)
Exosomal proteins of other body fluids (saliva and urine)
100337592 (tuba1c.L)
Exosomal proteins of colorectal cancer cells
100337592 (tuba1c.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
100337592
NCBI-ProteinID:
NP_001165669
Xenbase:
XB-GENE-6464328
UniProt:
P08537
A0A974HYY4
A0ABD8E948
LinkDB
All DBs
Position
2L:143260304..143266556
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSADAEDEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatttctatccatgttggtcaggctggtgtgcagatcggtaatgcctgc
tgggaactctattgtctggaacatggcatccaacctgatgggcagatgcccagtgacaag
accattggaggaggggacgactccttcaacacctttttcagtgaaacaggagcaggaaag
catgtccccagggctgtcttcgtagacttggaacccactgtcattgatgaggtgcgcact
ggcacatacaggcagttattccacccagagcagttaattacaggaaaggaagatgctgct
aataattatgcccgtggccactacacaattggcaaggagatcattgacctggtgctggat
aggatccgcaaactggctgatcagtgcacaggtcttcagggtttcctggtgttccacagc
tttggtggtggcactggttctggattcacctccctgctgatggagcgtctctctgttgat
tatgggaagaagtccaagctagaatttgcgatctacccagctcctcaggtctccacagct
gtggttgagccctacaactctattctcaccacccacaccaccctggaacactctgactgt
gctttcatggtagacaatgaggccatttatgacatctgccgcagaaatctagatattgaa
cgcccaacctacactaacctgaacaggctcattagtcagatagtctcttctatcacagcc
tctctacgatttgatggagccctaaatgtagatctcaccgagttccagaccaacttggtg
ccttatccccgtattcacttccctcttgccacttatgcccctgtcatctctgcagagaaa
gcttatcatgagcagcttactgtagctgacattacaaatgcctgctttgagccagctaac
cagatggtgaaatgtgaccctcgtcacggtaaatatatggcttgttgcctgttgtaccgt
ggtgatgtggtacctaaagatgtaaatgcagctattgccaccatcaagacaaagcgtagc
atccagtttgtggactggtgcccaactggtttcaaagttggcatcaactatcagccccca
acagtggttcccgggggagacctggccaaggtgcagcgtgctgtgtgtatgctgagcaat
accactgcaattgctgaggcctgggctcgtctggaccataagtttgatctcatgtatgcc
aagcgtgcctttgtgcactggtatgtgggtgagggtatggaagagggtgagttctctgag
gcccgagaagacatggctgccctggagaaagattatgaagaggttggtgcagatagtgca
gatgcagaagatgaaggcgaagagtattaa
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integrated database retrieval system