KEGG   Xenopus laevis (African clawed frog): 100337592
Entry
100337592         CDS       T01010                                 
Symbol
tuba1c.L, tuba3e, tuba4, tuba6
Name
(RefSeq) tubulin alpha 1c L homeolog
  KO
K07374  tubulin alpha
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04145  Phagosome
xla04210  Apoptosis
xla04517  IgSF CAM signaling
xla04530  Tight junction
xla04540  Gap junction
xla04814  Motor proteins
xla05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:xla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    100337592 (tuba1c.L)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100337592 (tuba1c.L)
  09143 Cell growth and death
   04210 Apoptosis
    100337592 (tuba1c.L)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100337592 (tuba1c.L)
   04540 Gap junction
    100337592 (tuba1c.L)
  09142 Cell motility
   04814 Motor proteins
    100337592 (tuba1c.L)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100337592 (tuba1c.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xla03019]
    100337592 (tuba1c.L)
   03036 Chromosome and associated proteins [BR:xla03036]
    100337592 (tuba1c.L)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:xla04812]
    100337592 (tuba1c.L)
   04147 Exosome [BR:xla04147]
    100337592 (tuba1c.L)
Messenger RNA biogenesis [BR:xla03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100337592 (tuba1c.L)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100337592 (tuba1c.L)
Cytoskeleton proteins [BR:xla04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100337592 (tuba1c.L)
Exosome [BR:xla04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100337592 (tuba1c.L)
  Exosomal proteins of other body fluids (saliva and urine)
   100337592 (tuba1c.L)
  Exosomal proteins of colorectal cancer cells
   100337592 (tuba1c.L)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 100337592
NCBI-ProteinID: NP_001165669
Xenbase: XB-GENE-6464328
UniProt: P08537 A0A974HYY4 A0ABD8E948
LinkDB
Position
2L:143260304..143266556
AA seq 449 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSADAEDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatttctatccatgttggtcaggctggtgtgcagatcggtaatgcctgc
tgggaactctattgtctggaacatggcatccaacctgatgggcagatgcccagtgacaag
accattggaggaggggacgactccttcaacacctttttcagtgaaacaggagcaggaaag
catgtccccagggctgtcttcgtagacttggaacccactgtcattgatgaggtgcgcact
ggcacatacaggcagttattccacccagagcagttaattacaggaaaggaagatgctgct
aataattatgcccgtggccactacacaattggcaaggagatcattgacctggtgctggat
aggatccgcaaactggctgatcagtgcacaggtcttcagggtttcctggtgttccacagc
tttggtggtggcactggttctggattcacctccctgctgatggagcgtctctctgttgat
tatgggaagaagtccaagctagaatttgcgatctacccagctcctcaggtctccacagct
gtggttgagccctacaactctattctcaccacccacaccaccctggaacactctgactgt
gctttcatggtagacaatgaggccatttatgacatctgccgcagaaatctagatattgaa
cgcccaacctacactaacctgaacaggctcattagtcagatagtctcttctatcacagcc
tctctacgatttgatggagccctaaatgtagatctcaccgagttccagaccaacttggtg
ccttatccccgtattcacttccctcttgccacttatgcccctgtcatctctgcagagaaa
gcttatcatgagcagcttactgtagctgacattacaaatgcctgctttgagccagctaac
cagatggtgaaatgtgaccctcgtcacggtaaatatatggcttgttgcctgttgtaccgt
ggtgatgtggtacctaaagatgtaaatgcagctattgccaccatcaagacaaagcgtagc
atccagtttgtggactggtgcccaactggtttcaaagttggcatcaactatcagccccca
acagtggttcccgggggagacctggccaaggtgcagcgtgctgtgtgtatgctgagcaat
accactgcaattgctgaggcctgggctcgtctggaccataagtttgatctcatgtatgcc
aagcgtgcctttgtgcactggtatgtgggtgagggtatggaagagggtgagttctctgag
gcccgagaagacatggctgccctggagaaagattatgaagaggttggtgcagatagtgca
gatgcagaagatgaaggcgaagagtattaa

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