Xenopus laevis (African clawed frog): 100337610
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Entry
100337610 CDS
T01010
Symbol
pdx1.S, ipf1, PDX-1, pdx1, STF-1, XlHbox-8, xlhbox8
Name
(RefSeq) pancreas/duodenum homeobox protein 1
KO
K07594
insulin promoter factor 1
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
100337610 (pdx1.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100337610 (pdx1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
MCCA_BT
Motif
Other DBs
NCBI-GeneID:
100337610
NCBI-ProteinID:
NP_001165682
Xenbase:
XB-GENE-6464311
UniProt:
P14837
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All DBs
Position
2S:complement(147299873..147318452)
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AA seq
271 aa
AA seq
DB search
MNADDQYYPQAPIYKEPCAFQRSQGQDYNPSPPACLYMGRQQQAAYSNPLVALDPGSPPD
ISPYEVPPISEEPIVPHLHHHHYHHHHHHPGIPHPHHQMPFPDDNESGTLEERNRTLLPF
PWMKSTKSHTWKGQWTDGSYIMEQEENKRTRTAYTRAQLLELEKEFLFNKYISRPRRVEL
AVMLNLTERHIKIWFQNRRMKWKKEEDKKRGRGSDPEQDSVVSSADVLKDEPQCLGNSQK
TGDLVLSSPLPTSSQPNQVPSIGSLRQAEKR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgatgaccaatattatccacaagctccaatttacaaagagccctgtgcgttc
cagaggagccagggacaggactataacccaagccccccagcatgcctttacatgggaagg
cagcagcaggcagcctacagcaaccccttggtagctctggacccaggcagtcctccagac
atctcaccgtatgaagtgcctcccatatctgaagagcccattgttcctcacctccatcac
catcactaccatcatcaccaccatcacccagggatccctcatccccaccaccaaatgcca
ttcccagatgacaacgaatccggaaccttagaggaaaggaaccgaacccttttacctttc
ccatggatgaaatccaccaaatcccacacctggaaaggacagtggacagatggatcatac
ataatggaacaagaggagaacaaaagaacaaggacagcctacacaagagcccagctgctg
gaactagagaaggaattcctcttcaacaaatacatctctcgaccaaggagagtagagctg
gcagtcatgctgaacctgacagagagacacataaaaatctggttccagaatcggagaatg
aagtggaagaaggaggaagataaaaagagaggaagaggcagtgacccagaacaagactct
gttgtgtcctctgcagatgtgctaaaagatgagcctcaatgtcttggaaactcccaaaag
acaggggacttggtcctttcttctcctctgccaacttcatcccagcccaatcaagttcct
tctattgggtcgctgaggcaggcagaaaaacgataa
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