Xenopus laevis (African clawed frog): 100337618
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Entry
100337618 CDS
T01010
Symbol
cdh1.S, arc-1, cd324, cdh1, cdhe, ecad, lcam, uvo
Name
(RefSeq) cadherin-1 precursor
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04371
Apelin signaling pathway
xla04514
Cell adhesion molecules
xla04520
Adherens junction
xla05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
100337618 (cdh1.S)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100337618 (cdh1.S)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100337618 (cdh1.S)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100337618 (cdh1.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
100337618 (cdh1.S)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xla04515
]
100337618 (cdh1.S)
04090 CD molecules [BR:
xla04090
]
100337618 (cdh1.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
100337618 (cdh1.S)
Cell adhesion molecules [BR:
xla04515
]
Cadherins
Major cadherins
100337618 (cdh1.S)
CD molecules [BR:
xla04090
]
Proteins
100337618 (cdh1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
He_PIG
BACON_2
Motif
Other DBs
NCBI-GeneID:
100337618
NCBI-ProteinID:
NP_001165703
Xenbase:
XB-GENE-6464305
UniProt:
P30944
LinkDB
All DBs
Position
4S:complement(43274848..43311236)
Genome browser
AA seq
872 aa
AA seq
DB search
MGLKRPWLLGAVVLLTLIQVQGGLAEWTQCRMGFSKEKYSFLVPKNLETDKALGRVIFNS
CEGPVRIQFASKDPNFEIHKDGTVYIKNPAKMKDNRKTFRVLAWETKGHVYSTNITLKRE
GHRHRQDLFSGKHSHHPKSETGLKRQKRDWVIPPIIVSENEKGPFPKRIVQIKSSYAKEV
KVYYSITGQGADTPPEGVFAIGREDGWLNVTRPLDREAIDNYVLFSHAVSSNGANVEDPM
EIIIKVQDQNDNDPVFTQSVFEGSVPEGSKPGTAVMTVSATDADDSVDMYNGVITYSILN
QEPKEPTNKMFTIHSESGLISVLTTGLDREKNPVYTLTIQAADGEFGKDRTTTATALIVV
MDTNDNPPVFDPTQYTAKVPENEVGYEVARLTVTDEDIEGTDAWNAVYKIIKGNEANYFS
IQTDTGNIGLLKTVKGLDYELKKQYILSVIVTNKANFSVPLQTSTATVTVSVEDVNEAPI
FLPPVKEVSVSEDLPSGQVVATYTAQDPDKEQNQKITYVIGNDPAGWVSVNKDNGIVTGN
GNLDRESKFVLNNTYKVIILAADSGSPSATGTGTLVLNLLDVNDNGPFLEPQQESFCQKD
PGFRVFTIIDRDLSPNTYPYKAELTGESNENWTAIVTGQSILELRPKKELEIGQYDVMIT
LLDSFGLSNVTKLHITICQCDGDKMQCEEKAAIAGGLGISAIVGILGGILALLLLLLLLL
LFVRRKKVVKEPLLPPEDETRDNVFSYDEEGGGEEDQDFDLSQLHRGLDARPDVIRNDVA
PVLAAPQYRPRPANPDEIGNFIDENLNAADNDPTAPPYDSLLVFDYEGSGSEAASLSSLN
SPNSDLDQDYSALNDWGPRFTKLADMYGGDED
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggggttgaagaggccctggttacttggtgctgtcgtgttgctgacactcattcaggta
cagggaggacttgcagaatggacacagtgtcgaatggggttttccaaggaaaagtacagc
tttttggtacctaagaacttggagacagacaaagctctgggtagagtgatctttaacagc
tgcgagggaccagtgagaattcagtttgcttctaaagatcctaattttgaaattcacaaa
gatggtacagtttatattaagaatcctgccaagatgaaagacaatagaaaaacattccgt
gtcctggcttgggaaactaaaggccatgtatactctaccaatataaccttgaaaagggaa
ggacatcgccataggcaggacttattttctgggaaacattcccaccacccaaaatctgag
actggtttgaaaagacaaaaaagagactgggtgattccaccaatcatagtgtctgagaat
gaaaagggcccatttcccaaaaggattgtgcagattaaatccagctatgcaaaagaagtc
aaggtttattacagtatcacaggacagggtgcggatacacctccagaaggagtgttcgct
attggacgggaggatggatggctaaatgtgacacgacctttggacagagaagccattgac
aattacgttcttttttcccatgctgtgtcatcaaatggggcaaatgtggaagatcccatg
gaaatcataattaaagtacaagatcagaatgataatgacccagtattcacacagtcggtc
tttgaaggctctgtgcctgaagggtctaagccaggtacggctgttatgactgtatctgca
acagatgccgatgatagtgtggacatgtacaatggtgtgattacctattctattctcaac
caagagcccaaagagcccaccaataaaatgttcactatccattcagaatctgggctgatc
agcgttcttacaactggattagacagagagaaaaacccagtgtacacactgacaattcaa
gctgcagatggagaatttgggaaagatcgcacaacaactgctacagctttaatcgttgtg
atggacactaacgataatcctccagtgtttgaccccacacaatacacggcaaaggttcct
gaaaatgaagttggctatgaggtcgcacgtcttacagtaacagatgaagatattgagggt
acagatgcctggaatgctgtgtacaagatcattaaaggaaatgaggctaactatttcagt
atccaaacagacactggcaacattgggcttttgaaaacagtgaagggtttggactatgag
ctgaagaagcagtatattctgtcagtcattgtgacaaacaaagctaacttttctgttcca
ctgcaaacttcaactgcaacggtgactgtatctgtcgaagatgtaaacgaagccccaata
tttttaccaccagtgaaagaagtttctgtgtcagaggatcttcccagtggccaagttgtt
gctacctataccgcacaggatccagacaaggaacagaaccagaagataacttacgtcatt
ggaaatgacccagcagggtgggtgtcggtaaacaaagataatgggattgtcactggaaat
ggcaatttggatcgggaatcaaaatttgtgctaaacaacacctacaaagtcataatcctg
gctgctgacagtggctctccttcagccactgggactggaacccttgtgcttaatctcctt
gatgttaatgataacggaccatttttggagccccaacaagaaagtttctgccagaaggat
ccaggctttcgtgtatttactatcattgacagagatctctcccctaacacatacccgtat
aaagcagagctgactggtgaatctaatgaaaactggactgctatagtgacaggacaaagt
atacttgagctcagacctaaaaaggagctggagattggacaatacgatgtgatgatcaca
ctgttagacagttttggactatcaaatgtgacaaagctccatattactatctgtcagtgt
gatggtgacaagatgcaatgtgaggaaaaggctgctatagcaggaggcttgggcatatca
gccatagttggaatccttggcgggatcctggcacttcttttattgctgttgttgctctta
ctatttgtacgaagaaagaaagtggtaaaagagcctttactacctccagaagatgagact
cgggacaatgtgttttcctatgatgaagaaggtggtggtgaggaggaccaggattttgat
ttaagccagcttcaccgtggcctcgatgctcgtccagatgtaatccgtaatgacgttgct
cccgttttagctgctccccagtatcgaccccgtcctgccaatccagatgaaattggaaat
tttatagatgagaacttgaatgcagctgacaatgaccccactgctcccccatacgactca
ctccttgtgttcgattacgaaggcagtggctccgaggccgcatcactcagctctctgaac
tcgcccaactctgatttagatcaagattatagtgctttgaatgactggggacctcgtttc
accaaactggcagacatgtatggaggtgatgaggattaa
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