Xenopus laevis (African clawed frog): 100381034
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Entry
100381034 CDS
T01010
Symbol
stx1b.L
Name
(RefSeq) syntaxin-1B
KO
K08486
syntaxin 1B/2/3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100381034 (stx1b.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
100381034 (stx1b.L)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xla04147
]
100381034 (stx1b.L)
Membrane trafficking [BR:
xla04131
]
SNARE
Syntaxin (Qa)
Stx-PM
100381034 (stx1b.L)
Exosome [BR:
xla04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100381034 (stx1b.L)
Exosomal proteins of other body fluids (saliva and urine)
100381034 (stx1b.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
Lzipper-MIP1
Spectrin_Anc-1
Relaxase_C
GNVR
VBS_C3G9
Baculo_PEP_C
ARM_ECM29
DUF4658
TolA_bind_tri
ETRAMP
CAP_N
Motif
Other DBs
NCBI-GeneID:
100381034
NCBI-ProteinID:
XP_018097585
Xenbase:
XB-GENE-5962129
UniProt:
A0A310U4Y0
A0A8J0U9C4
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All DBs
Position
9_10S:complement(113162588..113195176)
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AA seq
288 aa
AA seq
DB search
MRDRTQELRSAKDSDDDEEIVQVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQMTKQALNEIETRHNEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagggatcggacccaggagctgaggagcgctaaagacagcgacgatgatgaggagatt
gtgcaggtggatcgggaccattttatggacgaattctttgagcaggtggaggagatccgg
ggatgtattgagaagctgtcagaagatgtggagcaggtgaagaagcagcacagtgctatc
ctagctgcaccaaaccctgatgagaaaactaagcaggagctggaggatctcactgccgac
atcaagaaaacggccaacaaagttcgttccaagttgaaagcaattgaacaaagtattgag
caagaggaaggattaaatcgttcttcagctgacctacgtatccgaaaaacccagcattct
actctgtcccgcaagtttgtggaggtgatgacagaatacaatgcaacgcaatccaagtac
agggatcgctgcaaggaccgcatccagagacagctggagatcactggaagaacaacaacc
aatgaagaacttgaggacatgttggagagtggaaaactggcaatattcacagatgatatc
aagatggattcccagatgaccaaacaagctctaaacgagatagagacaagacacaatgag
atcattaagctagagaacagtatccgggagctgcacgacatgtttgtagatatggccatg
ctggtggaaagccagggggagatgattgaccgaattgagtacaatgtggaacactctgtg
gattatgtggaaagagcagtgtctgatacaaagaaagctgttaaatatcagagcaaagcg
agaaggaagaagattatgataataatctgttgtgtagtactcggtgtagtcttggcttcc
tctatcggagggaccctgggactctga
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