Xenopus laevis (African clawed frog): 100381038
Help
Entry
100381038 CDS
T01010
Symbol
top2b.L
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xla03032
]
100381038 (top2b.L)
03036 Chromosome and associated proteins [BR:
xla03036
]
100381038 (top2b.L)
Enzymes [BR:
xla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
100381038 (top2b.L)
DNA replication proteins [BR:
xla03032
]
Eukaryotic type
DNA Topoisomerases
100381038 (top2b.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
100381038 (top2b.L)
Centrosome formation proteins
Centriole proteins
100381038 (top2b.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
100381038
NCBI-ProteinID:
XP_018122938
Xenbase:
XB-GENE-6077813
UniProt:
A0A1L8FW96
A0A974HFA9
LinkDB
All DBs
Position
6L:complement(49399630..49450992)
Genome browser
AA seq
1696 aa
AA seq
DB search
MSKGGGEGAGGGSGGLTWVTLFDNQNNASKKELAESNNKNDSKKMSVERVYQKKTQLEHI
LLRPDTYIGSVETVTQSMWVYDEEVGMNCRDITYVPGLYKIFDEILVNAADNKQRDKNMN
CIKISIDPDSNIISIWNNGKGIPVVEHKVEKMYVPALIFGQLLTSSNYDDEEKKVTGGRN
GYGAKLCNIFSTKFTVETACKEYKHSFKQTWTSNMLKTTDPKIKYFDGDDYTCITFQPDL
AKFKMEKLDKDTVALLTKRAYDVAGSLKGVKVMLNGKKLPVNGFRSYVDLYVKDKLDETG
VALKVTHEVANERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQIVSKLIEVVKK
KNKAGVSVKPFQVKNHVWVFVNCLIENPTFDSQTKENMTLQPKSFGSKCQLSEKFSRAAS
NCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGKHSLDCTLILTEGD
SAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYD
DNESLKTLRYGKIMIMTDQDQDGSHIKGLLINFFHHNWPSLLKHSFLEEFITPIVKATKN
KQELSFYSIPEFEEWKKQTENQKLWKIKYYKGLGTSTAKEAKEYFADMDRHRIIFRYAGP
EDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKEL
ILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQA
LMMTIVNLAQNFVGSNNVSLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARLLFPSVDD
NLLKFLYDDNQRVEPEWYIPIIPVVLVNGAEGIGTGWACKLPNYDTREIVNNVKRMLDGL
DPHQMLPSYKNFKGAIQELGQNQYAMSGEIYVLDRNTVEITELPVRTWTQVYKEQVLEPM
LNGTDKNPSLISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSMVLF
DHMGCLKKYETVQDILKEFFDLRLHYYTLRKEWLIGMLGAEAARLNNQARFILEKIQGKI
AIENKSKRDLIQMLVQKGFESDPVKAWKEAQEKATEEDDLEDPNEDNSSDFGTGSGPDFN
YILNMSLWSLSKEKVDELVRQRDIKSKELNDLRRKSPSDLWKEDLAAFVEELDRVEAQEK
EDAMAGFAGKAIKGKIGKPKMKKLQLEETLPSLYGRRVEPQISAMKADASKKMLKKKKGE
MDSIALKMEFDEEFGSAPAEGGAEDSLTTTPVKPVKPKREKKEPGPRAKKNILTPKSSTK
KGKKRNPWSDNESKSDSDLEEDEPESLVIPRDSLLRRAAAERPKYTFDFSEEEDADDDDD
EGVITRNNNNIDDLKPPSSPAANSRDEDDDVLSDSQEKDDYDFPSFKSTPATQKPSESQK
KKDNIFSSSSFSEKVEDAAKYNSDDDDDDDDEPSPLYSSYSLKTSEKKAGKGSSKKEPAK
YNSDDDEEPSPLYSSNSFKSTEKPTSKGSSAKESTRYNSDEDDDDDVPFSSFVFKSSEKS
ASKGSSKKSKTLSDGPKPKRPPKPKKSETSLNSDCDLLDFGSSKKSATPKAKGRGRKRKT
SGSENEGGYNSGKKPTKPASSGKKSKKASFEQDSDDDLFPTEVASETNTSRQRPGRARKE
VKYFAESDDEDDFAMF
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaggtggcggcgaaggagctggaggaggcagtggagggctcacttgggtgaca
ctttttgataatcagaacaacgcatcgaaaaaggaactagcagaaagcaataataaaaac
gactccaaaaagatgtcggtagaaagagtttatcagaaaaagacccaacttgagcacata
cttctgcgacctgacacgtacattggatccgtggagacagttactcagtccatgtgggtt
tatgatgaagaggttggaatgaattgccgtgacataacctatgtaccaggtttatataag
atatttgatgaaatccttgtaaacgcagctgataataaacaaagagataaaaatatgaac
tgcataaaaatttctattgatcctgattcaaacatcatcagcatttggaataatggtaaa
ggaataccagtggttgaacacaaagtggagaaaatgtatgtccctgctttaatttttggc
cagttattaacatctagcaactatgatgatgaagagaagaaagttacaggagggcgaaat
ggatatggtgctaaactctgcaatatattcagcacaaaatttactgtggagacagcttgt
aaggaatacaagcatagctttaaacagacatggacaagcaacatgttgaagacaactgac
cccaaaattaaatattttgatggagatgactacacatgcattacattccagccagattta
gccaagtttaaaatggaaaaactggacaaggatactgtggctcttctgacaaaacgagca
tacgatgttgcaggctccctcaaaggagtgaaagtcatgctcaatggaaaaaagctccct
gtaaatggcttccgcagttacgtagatctttacgtaaaggacaaacttgatgaaactggc
gttgcccttaaggtaacccatgaagttgcaaatgaaagatgggatgtgtgtttaacgttg
agtgaaaagggattccaacaaatcagttttgtgaatagtattgctaccacaaagggtggt
agacatgtagattatgtggtagaccaaattgtgtcaaaacttattgaagtggtgaagaag
aagaacaaagctggtgtctctgtgaagcccttccaggtgaagaatcacgtttgggttttt
gtcaactgcttgattgaaaacccaactttcgattctcaaactaaagaaaacatgacactc
cagcctaaaagttttgggtccaaatgtcagctgtcagaaaaattttcaagggcggcatct
aactgtggcattgtagagagcattctaaactgggttaaattcaaagcccaaacgcagcta
aataagaaatgttcctctgtaaaacacagtaaaattaaaggcattcccaagcttgatgat
gctaatgatgcaggtggaaaacattccctggactgcacattgatattaactgagggagac
tctgccaaatctttagctgtttcaggcttaggtgtcattggacgagatcggtacggtgta
tttccgctaagaggaaaaattctcaatgttcgagaagcttcccacaaacagattatggaa
aatgctgagataaacaacatcattaaaatagttggcttgcagtacaaaaaaagctatgat
gacaatgaatcccttaaaaccttgcgttatggaaaaattatgattatgacagatcaggat
caagacggttcacatatcaaaggcttattgattaattttttccatcacaattggccatct
ctactgaaacatagtttccttgaagaatttatcacaccgattgttaaggctacaaagaat
aaacaggagctttcattctacagtattcctgagtttgaagaatggaaaaaacaaacggaa
aaccaaaaattgtggaagataaagtattacaaaggtttgggcaccagcactgcgaaggaa
gcaaaggaatactttgcagacatggacaggcacagaattatatttagatatgcaggccct
gaagatgatgcagctatcacactggcttttagcaaaaagaaaattgatgacagaaaggag
tggctcacaaactttatggaagacaggagacaacggcgacttcacggattgcctgagcaa
ttcttatatggcacagctacaaaacacttgacttacaatgacttcattaacaaggagctt
attcttttttcaaactctgataatgagcgatctattccatctcttgttgatggttttaag
cctgggcaaagaaaagttttgtttacttgttttaagaggaatgataaacgggaagtcaag
gttgctcagctggctggttctgttgctgaaatgtcagcttaccatcatggagagcaagcc
ctgatgatgacaatcgtaaatcttgcccagaactttgtgggaagtaacaatgtgagcttg
ctgcagcccattggtcagtttggtactcgacttcatggtggaaaagatgctgccagccca
cgttatattttcacaatgttaagtcctctggcaagattgctttttccatccgtggatgat
aacctcttgaagttcctttatgatgataaccagcgtgtagaaccagagtggtacattcct
attatacccgttgttttagttaatggagcagaaggaattggtactggatgggcatgcaaa
ctgcccaattatgacacgagagaaattgtcaataatgtgaagagaatgctggatggtctt
gatccacatcaaatgcttccaagctacaagaattttaaaggtgcgattcaagaactggga
cagaatcagtatgcaatgagcggtgaaatatatgtgctggaccggaacacagttgaaatt
acagaacttcctgttaggacatggacccaggtttacaaagaacaagttttggagcccatg
ctcaatggaacagacaaaaatccttcattgatctctgattacaaagagtaccatacagac
acaactgtgaaatttgttgtcaaaatgacagaagaaaagttggcacaggcggaagctgca
ggcttgcataaagtctttaaacttcaaactagtctcacgtgcaattctatggtattgttt
gaccacatgggctgtctaaagaaatatgaaactgtgcaggacattctgaaggaattcttt
gatctccggttacattattataccctgcgcaaagaatggctgataggaatgctgggagct
gaagctgcaagactgaacaaccaagcacgtttcatcctagagaagatacaaggcaaaatc
gctatagagaacaaatccaaaagagatcttattcagatgttggtgcagaaaggatttgag
tcagaccctgtgaaagcttggaaggaggcacaagaaaaagcaacagaggaggatgacctt
gaagatccgaatgaagacaattcttcggactttggcactggatcaggaccagattttaac
tacattctgaatatgtctctatggagcctttcaaaggaaaaagtagatgagcttgtcaga
cagagggatataaagagcaaagaacttaatgacctcaggaggaagtctccatctgacctg
tggaaggaagacttggcagcttttgttgaagagctagatagggtggaagctcaagaaaag
gaagacgccatggctgggtttgcaggcaaagcaataaaaggcaaaattggcaaacccaaa
atgaaaaaattacagcttgaggagactttgccgtctctttatggcaggagagtagagccc
caaatcagcgcaatgaaggcagatgccagcaaaaagatgctaaagaaaaagaagggtgaa
atggactctattgcactgaaaatggagtttgatgaggaatttggctctgcaccagcagag
ggaggtgcagaagattccctgaccaccactccggtaaaacctgtaaagcccaaaagggaa
aaaaaagaacctggtcctcgagccaaaaagaacatattaacacccaagtcatcaaccaag
aaagggaaaaagcgaaacccttggtcagataatgagtcgaaatcagacagtgacctggaa
gaagatgagccagaatccttggtcattcctcgggactctctcctaaggagagctgctgct
gaaagacccaagtacacatttgatttctctgaagaggaagatgcagacgatgatgacgat
gaaggtgtcattacccgcaataataataatattgatgacttaaaaccgccatcttctcct
gctgcaaatagtcgggatgaagatgatgatgtgctctctgacagtcaagaaaaagatgac
tatgatttcccttctttcaagtctaccccagccacacaaaagccttcagaatcacaaaag
aaaaaagacaacatcttttcatcttcttcattttcagaaaaagtagaagatgctgcaaaa
tataacagtgacgacgatgatgatgatgacgatgaaccctccccactatactcttcatac
tccttaaaaacttcagagaaaaaagcaggcaaaggatctagtaagaaagaacctgcaaaa
tataacagtgatgatgatgaggaaccctcccctctgtactcctcaaattccttcaaatct
acagaaaagccaactagcaaaggatctagtgcgaaagaatccaccagatataacagcgat
gaagacgatgatgacgatgtaccgttttcctcattcgtttttaaatcttcagaaaaatca
gcaagtaaaggttctagcaagaaatcaaaaacattgtcagacggccctaaaccaaaacgg
ccgcctaagccaaagaagtctgagacgtcgttgaattctgattgtgatttattagacttt
ggttcatcaaagaaatctgcaacacccaaagcaaaaggaagaggaaggaaacgaaaaaca
tctggttcagaaaatgaaggcggatacaattctgggaaaaaacccacaaaacctgcatct
tcaggcaaaaaatccaagaaagcctcatttgagcaggattccgatgatgatctcttccct
acagaagtcgcctctgagaccaacacgtcgaggcaaaggcctggccgggcaaggaaagaa
gtcaaatattttgcagagtccgacgatgaagacgattttgctatgttttaa
DBGET
integrated database retrieval system
