Xenopus laevis (African clawed frog): 100381078
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Entry
100381078 CDS
T01010
Symbol
mkrn3.S
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
100381078 (mkrn3.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100381078 (mkrn3.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100381078 (mkrn3.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
Torus
zf-CCCH
zf-RING_2
zf-C3HC4
zf-CCCH_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-CCCH_3
zf-C3HC4_2
IBR_1
zf-RING_11
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
100381078
NCBI-ProteinID:
XP_018104738
Xenbase:
XB-GENE-5958820
UniProt:
A0A8J0UK05
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Position
2S:complement(55669915..55676486)
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AA seq
375 aa
AA seq
DB search
MLGNMATAGREVNAKVRCRSFNRGSCRWGDNCRFSHERKVAPICRHFQNGFCVYGDKCSF
QHLLLPPHPPQYLPGRRVSEPCILPHVPEHHEARRGSEPVVPPLKLSEERKEALPPSGRE
NWALAAEFIPRHSGLVRSVSSPTLPHEASIRTDVTKHFDGMKSTNSLKNLNSQKCTSDLQ
YERSRDVVCGICMDKVYEKQVPERVFGILPNCNHAYCVGCIKRWRKTRDFQNEVVKGCPQ
CRIKSSYFIPNKYWVGDSAEKVKLIETFKAKTSKIRCRFFLRGNGHCPFKSECIYLHEIP
SRHQQRKRREQRRRSASALTYSHLVGMFDEDFTDDEDIDLLHCALTLALIEDNFELGLGF
SEEVEILWGEGSDSE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgctgggaaatatggcaacagccggtagagaggttaatgcaaaggttcgttgtagatct
tttaaccggggctcctgcagatggggtgataactgtcgtttttcccacgaaaggaaagtc
gctccgatctgccgacatttccagaatggcttctgtgtctatggagacaagtgcagtttt
cagcacttactgctaccacctcatcctccacaatacctgccaggacgtagggtctcggaa
ccttgtattttgcctcatgttcctgagcatcatgaagcacgcagaggatccgagcctgta
gttccccccttaaagctgtctgaggagcggaaggaagctttgcctccttcaggtagagag
aactgggctctagctgcagagttcattcctagacattcaggacttgtaagatctgtatcc
agtcctacacttccgcatgaggcatccataagaactgatgtgactaagcattttgatggc
atgaaaagcaccaattctctaaaaaacttgaattctcaaaagtgtacttcagatctacaa
tatgaacgtagtcgggatgtagtttgcgggatttgtatggataaggtgtatgagaaacaa
gtaccagaaagagtgtttggcatattgccaaactgtaatcacgcttactgtgttggttgt
attaaacgctggcggaaaacaagagacttccagaatgaggttgttaagggctgtcctcag
tgccgaataaagtccagctattttatccccaacaaatactgggttggagattctgcagag
aaggtgaaactgatagaaacctttaaagcaaagaccagcaaaatccgctgccgctttttc
cttcgtgggaatggccattgtccctttaaatcagaatgcatttaccttcatgaaatacca
tctaggcatcagcaaaggaaaagacgtgaacaaagaagacggagtgcctctgctctgacc
tattcgcacttggttggaatgtttgatgaagacttcacagatgatgaggacattgatctt
cttcattgtgctctcacccttgctctaattgaggataactttgagctgggcttaggtttt
tctgaggaagttgaaattctgtggggtgagggtagcgactcagagtag
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