Xenopus laevis (African clawed frog): 100381103
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Entry
100381103 CDS
T01010
Symbol
snrpd2.L, sm-d2, smd2, snrpd1, snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein D2 polypeptide L homeolog
KO
K11096
small nuclear ribonucleoprotein D2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100381103 (snrpd2.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xla03041
]
100381103 (snrpd2.L)
03032 DNA replication proteins [BR:
xla03032
]
100381103 (snrpd2.L)
Spliceosome [BR:
xla03041
]
Complex A
U1 snRNP components
Sm proteins
100381103 (snrpd2.L)
U2 snRNP components
100381103 (snrpd2.L)
Complex B
U1 snRNP components
100381103 (snrpd2.L)
U4/U6.U5 tri-snRNP components
100381103 (snrpd2.L)
Complex C
U2 snRNP components
100381103 (snrpd2.L)
DNA replication proteins [BR:
xla03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
100381103 (snrpd2.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Ldh_1_C
Motif
Other DBs
NCBI-GeneID:
100381103
NCBI-ProteinID:
NP_001167498
Xenbase:
XB-GENE-964252
UniProt:
Q5HZQ7
LinkDB
All DBs
Position
8L:complement(62401033..62404661)
Genome browser
AA seq
118 aa
AA seq
DB search
MSLLNKPKTEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLLAGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccttaataagcccaaaactgagatgacgcccgaagagctccaaaagcgagaa
gaggaggagtttaacacagggccactgtctgtgcttacacagtctgtgaagaacaacaca
caagtcctgatcaactgtaggaataacaaaaagttgctgggcagagtgaaagcctttgac
agacactgtaacatggtactggaaaatgtcaaagaaatgtggactgaagtccctaagagt
ggaaagggtaaaaagaagtccaaaccagtgaacaaagaccgatatatctccaagatgttc
ctccgtggagacagtgtcattgttgttcttcggaatccactacttgctggaaagtga
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