Xenopus laevis (African clawed frog): 100381123
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Entry
100381123 CDS
T01010
Symbol
arid5b.S, arid5b
Name
(RefSeq) AT-rich interaction domain 5B S homeolog
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
100381123 (arid5b.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Helix-turn-helix
ARID
100381123 (arid5b.S)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
100381123
NCBI-ProteinID:
NP_001278010
Xenbase:
XB-GENE-1007582
UniProt:
W8W3R9
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All DBs
Position
7S:9009769..9209806
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AA seq
1187 aa
AA seq
DB search
MEPNSLKWVGSSCGLHGPYIFYKAFQFHLENRARILSLGDFFLVRCKPHEPVCVAELQLL
WEERTSRQLLSSSKLYFLPEDTPKGKNSSHGEHEVIAVSEKVIVRLEDLVKWAHSDFSKW
NYGLKALPVKLKELARNGQKESLAKYRQSVLNSGLNFKDVFKEKAELGEGEGDKNVMVLS
YPQYCRYRSILKRIQAEPSSVLADQFVQALGGIAVINNNTKILYCRDTFDHPTLIENESI
CDEFAPNLKGRPRKKKLGPQRRESVNGVKELAGVCDGKTVAKVKCEVKATLPKTKTPNGN
CKKILIEDKPKAGEDDGCKVDEGKADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWT
MFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIGGEED
KPLPSAKPRKPENGSQEVELKAKICGAKRIKNESQKSKKEKDPTAKGLDMTEVPPDEEDH
LEADEKNMPLDYDLEETKTSVDKSESVVSEVNYPSPLENDELEETVANKDHVTKDENSCQ
DPDPVDSLIHVKEINCRQTDKQLQMPNETMTTTKREQIKEDYSDHLENDPEDVQLHVFPA
IQAPQHDMHLEEEKLPDMPDYIANCTVKVDPLGSNDLKNPLDSNLLQNALKQNPKVYFVQ
TLDMLSDEKDTSASMNDDSSFSYTPLLYSRGNPGIMSPLAKKKLLSQVSGASQPGNLPYG
SPPPLISKKKLSSKGEVSPSLLQTHHSSNSESAAINRPSVIQHVQSFKQKSPEEKKTVND
HYKNSMFGKVDSYCCDFAKHHQSVLADSYALKSCVQECKEKMAEKRAASNSNVPSFVAEF
YSSPHLHRLYRQAEHHLHNENSAKFHSREMFRDLENVSSHKHHYHASLHQHDKQNLHDDV
DDQPTDLSLPKSLHKLSTKIPGSSICHQPVQQDSKSHNPFQTPNSKTLGLDCNPKACRVS
PMTMPISKRHMDSIQRPSKTVKPDTLRKVEGLVHPFSIGKTNTHNFGAPRSLKRNLEDMD
NPLTDKKIRAVSPLHLPKEMSGKDTFVGQDGESSKSVHDIHSGSMIESHKYPLSSPFFPG
MYPGSLCGGLSSRIPTAYSHPLQYLKNQTALSPLMQPLALHTFMMQRQYLTNSTNSQQLY
RQIASHAPVGSSYGDLLHSSIYPLTAINPQSPFPSSQMSSVYPSTKL
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaactcactcaagtgggtcggatcctcctgtggactgcatggaccttacatc
ttctataaagccttccagttccacctggagaacagagcgcggatcctgtccctgggagac
ttcttcttggtccgctgcaaaccccacgagcccgtctgtgtagcggagctgcagctcttg
tgggaagagaggactagccggcaacttttatccagctccaaactttatttcctcccagaa
gatacccccaagggcaagaacagcagccacggagagcatgaagttatagctgtttcggaa
aaggtcatagtccgactggaggacttggtaaagtgggcacactcggatttctcgaaatgg
aactatggactcaaggcgttgcctgtaaaactcaaggaacttgccaggaatggccagaaa
gagtccctggccaagtacagacaatcagtgctaaacagtggattgaatttcaaggatgtc
ttcaaagaaaaagcagaattaggtgaaggcgaaggcgacaaaaatgtgatggttttaagt
tatccccagtattgccgatatcggtcaatcctgaaacgaattcaggcagaaccgtcctct
gtattagcggaccaatttgttcaggccctcggagggatcgctgtcatcaacaacaataca
aagatactttattgtcgggacacctttgaccacccaactctgattgaaaatgaaagtata
tgtgacgaatttgcaccgaatcttaaaggcagaccacgtaagaagaagcttggtccacag
agaagggagtctgttaatggagtgaaggagttggctggagtttgtgatgggaagactgtg
gccaaggtcaaatgtgaagtcaaggccacattacccaaaacaaagactcctaatgggaac
tgcaaaaaaatattgattgaagataaaccaaaagctggcgaagatgatggatgtaaagta
gatgaaggaaaggcagacgagcaggcatttttagtggcactctataagtatatgaaagag
cgaaaaactcccattgaaaggataccatatttaggcttcaagcagattaacctttggact
atgtttcaagctgcgcaaaaactgggaggatatgaaacgattactgcacggaggcaatgg
aaacatatttatgatgaattaggaggaaaccctggaagcacgagcgctgctacatgtact
cggagacattacgaaagattaatcctcccctatgaaaggttcatcggtggagaggaagat
aaaccattgccttcggccaaacctcgaaaaccagagaatggctctcaggaagtggagctg
aaagcaaagatttgtggggcaaagcgtattaagaatgaatctcagaagtcaaagaaagaa
aaggatcccacggcaaaaggccttgatatgactgaggttccaccagacgaagaggatcat
ctggaagcagatgagaaaaacatgcctcttgattatgatttagaggagacaaagacatct
gtagacaagtctgagtcagtggtctccgaagtcaactatccctcgcctctggaaaatgat
gagctggaagaaaccgttgctaacaaagaccatgtgacaaaggatgaaaattcatgccaa
gaccctgatcctgttgattcactgattcatgttaaagagattaactgcaggcaaacggat
aagcagctacaaatgcctaatgaaaccatgacaacaacaaaacgagagcaaatcaaagag
gattattcagaccatttggaaaatgacccagaggatgttcaactgcatgtgtttcccgcc
attcaggcgcctcaacatgatatgcacttggaagaggaaaaacttccagatatgcctgat
tacattgcaaattgcacagtgaaggtggatccattgggatcaaatgatctcaagaatccc
ctggacagcaacttactccaaaatgcacttaagcagaatcccaaagtttactttgtacaa
acacttgacatgctgagtgatgagaaagatacatctgcctcaatgaacgatgattcctca
ttcagttacacacctctgctttactcacgggggaatccgggaatcatgtcccctcttgca
aaaaagaagcttttatctcaggtgagcggagcttcacaacctggcaaccttccctatggt
tcaccacctcccttaataagcaaaaaaaaattaagctctaaaggtgaagtatctccatct
ttgttacaaactcatcattcgtctaattcagaatctgctgccataaacagaccttctgtt
attcagcatgtacaaagttttaagcaaaaaagcccagaggagaaaaagactgtgaatgac
cattacaaaaacagtatgttcggcaaagtagactcttactgctgtgattttgcaaaacac
caccagagcgtcctggctgactcttatgctctcaagtcctgcgtacaggaatgcaaagaa
aaaatggcagaaaaaagagctgcgtcaaactcaaatgtgcctagttttgtggctgaattt
tattcctcccctcacctgcacaggctatataggcaagcagagcatcatctccacaatgaa
aactctgcaaaatttcactcccgagaaatgtttagggacttggaaaatgtgtcttcacac
aaacatcattaccatgcttctttgcaccaacacgacaaacagaatttacacgatgacgta
gatgaccagcccactgatttaagccttcccaaatctctgcacaaactctccacaaaaatt
ccagggtcttctatttgccaccagcctgtacagcaagattccaaaagccacaatccattt
caaactccaaacagcaaaacccttggtctggactgcaatcccaaagcctgtagggtttca
ccaatgaccatgcctatctccaaaagacatatggattccattcaaaggccttcaaagact
gtaaaacctgatactttaagaaaagtggaaggtttagtccatccattctcaattggtaaa
accaatactcataactttggggctccacgatccctcaaaagaaacttggaggacatggac
aaccctctcactgacaaaaaaataagagctgtatctccactacacttgccaaaggaaatg
tctgggaaagacacatttgttggccaagatggggaaagcagcaaatcagtgcatgatatt
cattctggtagcatgatcgaaagccacaaataccccctttcatcacctttctttcctggc
atgtaccctggaagcttatgtggtggtttaagttctcgcataccaactgcttattctcac
cctttgcagtacttgaaaaaccagactgcgctttctccccttatgcaacctttggctctt
cataccttcatgatgcaaagacaatatctgactaattctactaactctcagcagctgtac
agacaaattgcttcacatgcaccagtaggctcttcctatggagacctactacacagcagc
atttatcctttaactgccatcaatccccaatctccattcccttcctctcaaatgtcttct
gtatatcctagcacaaaactttaa
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