Xenopus laevis (African clawed frog): 100381128
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Entry
100381128 CDS
T01010
Symbol
ltn1.L
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xla03009
]
100381128 (ltn1.L)
04121 Ubiquitin system [BR:
xla04121
]
100381128 (ltn1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100381128 (ltn1.L)
Ribosome biogenesis [BR:
xla03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100381128 (ltn1.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100381128 (ltn1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
zf-RING_2
HEAT_GCN1
zf-ANAPC11
FANCL_C
RINGv
zf-rbx1
zf-RING-like
TOR1L1_N
zf-C3HC4_2
zf-RING_16
C1_1
Motif
Other DBs
NCBI-GeneID:
100381128
NCBI-ProteinID:
XP_018101448
Xenbase:
XB-GENE-1217550
UniProt:
A0A1L8HCQ9
A0A974HXK2
LinkDB
All DBs
Position
2L:16302638..16363831
Genome browser
AA seq
1779 aa
AA seq
DB search
MGGKNKQRTKGNARPSSSGRAADLLAKERGTIPGFIGFGSSQSDHGYVPAVQGAEEVDSL
VDADFRMVLRKLSKRDVITKLKAMQEFGVMCKEREMETVRGVLPYWPRVYCKISLDLDRR
VREATQQAFEQLIVKVKKYLAPHLKSLMGFWLIAQCDTYSPAASSARVAFEAAFPTHKQP
EALAFCKEEIMNVLLDLLLKETPDTLSDTQTVPVEDRESKYYRVVTCSLLALKRLICMLQ
RSESSSLQERLAHLLSQSKFWKYSKHSTSSIRSAFFELVSALCQYSPDVLRPEAPRLCPA
VLLSIDDSDAVVCPALWEAVLYTITTIEDCWEHVSVQKGVLPKLWSVLREGGRGMATVTF
PNLLPFISRVPCHIIKTQTDFYSNFFNSLCQGLSSERAVASPTECSAIISAYMECLRFVM
QENAGEEEENRKVQQILISDQLIPLIDASLKDPKLQNSPLFSQVEETIYSWEKKAESPGL
GDKPSRIHTTLLCEFWENLAHICVSHVDVVEAGEKNLAGVSGLLQVLQDPNCPLKVNKKK
KAKIRFKGEDENESDSVSHASESQPVSKFITETCSSKGRDPRIAQLREGRLEDLVCKLAE
LSMVYISEQGSQRHLMFLAALLSTFPSLRVFQVLLQQGSEEDPKNLKSSEQNVKPQLKNP
AVQFLYTKLIFWFNEESLEESDFLVDILYSVLFCCADFSERKHLLDDLTKMNLKWSVFLY
IIQKACTDPEKYSLASDWLKGDVLGERLICLANELCTSGLTDQATTSETYCSKKWALLSL
VLSEHVHNEYMIADAYVEKIIDKLHSALMKARNLSKAGHLEQSVSFICDVASNFFSSIKG
CLQMPSAEDLLLTIFQLCAQTSDTSHMSESLLLKLKNTWLAGLHSLVCQYKNMPQGSDFL
KRSAQWVKDQIQTSHLHVKSLQSLICTVDDLYGAVLDSSPAGFSLLAEHTASMIPSVEAW
QKMWQALSTQWLSKPLLEGRLSMNMETSGTDLKSIPKSWLPGHLCTASLLSKVAFRLLEK
EQPFNEEEITMKINITVAEMLYSLQWCEELENPPAIIVECCEMLYSLGVSHEKILDLSVR
LPGLVEVLYNRSKEDGLLWSLTANRFIHKRGTGHQEILPLIEDTEKYFPVTQGNLHTIQS
LASFMCKEEKEELVVQCTARLMTCTASAVSCTDGGFGYLAIINSCLGSDSDVCQEIFPGV
LKVIVSWKNELEDIFLFSSNLQESSQSLIGLNVEMIRFLSRLLKYLASPVSSLVDVDWDF
VMCSMLAWLESACESSAAYHIPLVRLFACASCDLATEISHYFQSAAMSTTASLPANLISE
WIEFFSEGIHMLMLPMLVRMAEEYKASETSHMSCVLQSLGRTLGYISKEQLLNHKLPAKF
VAGQKTNLTDRLQSLLNTLAPLLLYRERSVQITVYHLLDKIMEDLPVFDDEDLKSYGDED
EEPALSPPAALMSVLAIQEDLVESILKVVPVGEFAVVEPLKEEFCFVLGYLLTWKLTLTF
FKAASSQLRALYSQYLRKTKSLNKLLHNLFKLMPHNPVLPGQASDVPSKDPKTFFSEELQ
LTVKGTATVQQEVPHLACCVYHMTLKDLPAMVRLWWNGCEKRIFNVVDKFTTKYVSGVLS
SQEICSVQSSTQVFDGMTVKARSTTREVIATYSIDDICMELIIQLPQNYPLGSITVESGR
RVGVAVQQWRNWMLQLNTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGSNY
SLPKKACRTCKKKFHSECLYKWFTSSNKSTCPLCRETFF
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaaagaacaagcagaggacgaaaggaaatgcgcggccctcgagcagtggaagg
gccgcagaccttctggccaaggaaagagggacaattcccggcttcattggctttggatca
tcgcagagcgaccacggctatgtccctgccgttcagggagccgaagaggtggacagcctc
gttgatgccgatttccgcatggtgctgcgcaagctttccaaaagggacgtcatcaccaaa
ctaaaagctatgcaggagtttggtgtaatgtgcaaagagagagaaatggaaacggttaga
ggtgtgctcccctactggccaagagtatattgcaagatttctctggatctggatcgacgg
gtcagagaagccacccagcaggcatttgagcaacttatcgtgaaagtgaaaaaatatttg
gctcctcatctgaaaagtctaatggggttctggttgattgctcagtgtgacacctattca
cccgctgcgagttctgccagagtggcttttgaagctgctttcccaacgcacaaacaaccc
gaagctttggcattttgcaaggaggaaataatgaacgtccttcttgatcttctgctgaaa
gaaacaccagataccctaagcgatacgcagactgtaccagttgaagaccgagaatccaag
tactatcgggttgtcacctgctctttattggctttgaagaggttgatttgcatgttgcag
aggagcgagagcagttccctgcaggagaggcttgctcaccttctgtctcagagcaaattc
tggaagtacagcaagcacagcacatcaagtattcgctcggccttctttgagctagtgtct
gctctatgtcagtactcacctgatgtgttacggccagaagcccccaggctgtgtccggcc
gtactcctgagtattgatgacagtgatgctgtggtgtgcccagctctctgggaagcagtc
ctttacaccattacgactattgaggattgttgggagcatgtgagtgtacaaaagggggtt
ttgcccaagctctggagcgtcctgagagaaggtggccgcggcatggcgactgtcactttt
cccaatctgctgccattcattagccgtgtgccctgtcatatcataaagacacagacagac
ttttacagcaacttctttaactctttatgccaaggcctgtctagtgaacgagctgttgcc
agccctacagaatgttctgccattatatctgcctacatggaatgcttgcgatttgtcatg
caggaaaatgctggagaagaagaggaaaacagaaaagtccagcaaattctcatctctgac
caattaataccacttattgacgcctctttgaaagaccccaaacttcagaatagcccgctg
tttagccaagttgaagaaaccatctattcctgggaaaagaaagcagaaagtccaggattg
ggcgataaaccttccaggatacacaccactttattgtgtgaattttgggagaatctggca
catatatgtgtgtctcacgtggatgtggttgaagccggggagaagaatttagcaggtgtg
tctggacttcttcaggtgctacaagatcccaactgtcctttgaaagtgaacaaaaagaag
aaagcaaaaataagatttaaaggagaagatgaaaatgaaagtgatagtgtctctcatgca
tcagaatcccaacctgtgtctaaattcattactgagacatgtagttctaaaggcagggat
ccccgtattgctcaattaagagaaggacgccttgaggatctggtgtgcaagctggctgaa
ctgagtatggtctacatcagcgagcaagggtcacagcggcacctgatgttcttagctgct
ctgctgagcacttttccttccctaagagtgtttcaggtgcttctacagcaaggcagcgaa
gaagatcccaagaatttaaagtcttctgagcagaacgtgaaacctcaactcaaaaaccct
gcagtacagttcctgtatacaaaattaattttctggttcaatgaagaaagcctggaagag
tccgacttcttggtcgacatcttatacagtgtcctgttttgctgtgcggacttctccgaa
cggaaacatctcttggatgacctgacaaagatgaatttgaaatggagtgttttcctttac
atcattcaaaaggcttgcacagacccagagaagtactctctagctagtgattggttaaaa
ggggacgttctgggagagagactgatctgtttggcaaatgaactgtgcaccagtgggttg
accgatcaagcgaccacgagtgagacatactgttcaaagaaatgggctctcttgagcctg
gtgttatcagagcatgttcacaatgaatatatgattgctgatgcctatgttgaaaaaata
attgataagctccattcagctctgatgaaggcccgaaacctttccaaagctggccatctt
gagcagtctgtgtcattcatctgtgatgttgcctcaaatttcttcagctccataaagggt
tgcttacagatgccttctgctgaggatctgcttctcaccatcttccagctctgtgctcag
acctctgatacaagccacatgtcagaatcactgctgcttaagctgaagaatacttggctg
gccggcttacattcccttgtttgccagtataagaacatgccgcagggtagcgatttcctg
aaacgatcggcacaatgggtcaaggatcagattcaaacgtcacaccttcatgtgaaaagc
cttcagtctttaatatgcacagtggatgatttgtatggtgcagtcctggactcaagcccg
gcaggattcagtctcctggcagagcatacagcttctatgataccaagcgtggaggcatgg
cagaagatgtggcaggccctttctacccagtggttaagcaagccgctcttggaaggtcga
ttaagcatgaatatggaaacatctgggacagatcttaaatcaatccccaaatcttggctc
cccggccatctctgcactgcctctttattaagcaaagtggcctttcgattgctggagaag
gagcaaccatttaacgaggaggaaatcacaatgaaaataaacattaccgttgcagaaatg
ctgtattccttgcagtggtgtgaggagctggagaatccccccgcgattattgtggagtgt
tgtgaaatgctttactcactgggtgtctcccatgagaagatactggacctcagtgtacgg
cttcctggactcgtggaagtcctgtataacaggtccaaggaagatggcttactttggtcc
ttaactgctaacagatttatccataaaagaggcacggggcaccaggaaattctgccatta
atcgaagacacagaaaaatatttccctgtgacacaaggcaacttgcacaccattcagagc
ttggcttccttcatgtgcaaagaggaaaaggaagaacttgttgttcagtgcactgcccga
ctcatgacttgcactgcctccgctgtgtcctgcacagatggaggatttggttaccttgca
ataatcaactcctgcttaggatccgattcagatgtgtgccaggaaatcttccccggagtt
ctaaaagtaatagtatcatggaaaaatgaactggaagacatatttctctttagcagtaat
ttgcaggaatccagccagagcctgattggcctcaatgtggaaatgatcaggtttctttct
cgtcttctaaaatatttggcatctcctgtgtcatctttggtggacgtcgattgggacttt
gtaatgtgttccatgctggcttggctcgagagtgcatgtgaaagctccgctgcctatcat
attcctcttgttcgattgtttgcctgcgcaagctgtgacttggccacagaaatctctcac
tatttccagtctgccgccatgagcactacagcgagtcttcctgccaaccttatctctgag
tggattgagttcttctctgaaggaattcacatgctaatgttgcccatgttggtgagaatg
gcagaagagtacaaggcttcagagacttcccacatgagctgtgtgctgcagtcactgggt
agaacgctcggttacatttcaaaggagcagctgttgaaccacaagcttcctgccaagttt
gtcgctggacagaagaccaaccttactgacaggctgcaaagcttgctaaacactctggct
cccctcctgctttatagagagagatccgtgcaaatcacagtttatcatctgctggataaa
ataatggaagacttgcctgtatttgatgatgaagatctcaaatcttacggggatgaagat
gaagagcctgctttatctccacctgctgcactgatgtctgtcctggcaatccaagaagat
ttggtagaaagcatccttaaagtggtaccagtaggcgagtttgctgttgttgagccatta
aaagaggagttctgctttgttcttggttatctcctgacctggaagctaacgctcactttc
ttcaaagctgcatcatctcagctgcgggcgctgtactctcagtatctgcggaaaaccaag
agtctgaacaagctgctgcataacctgtttaagttaatgccccataacccagtcctgcca
gggcaagccagcgatgtacccagcaaggacccaaagactttctttagtgaagagcttcag
ctgacagtaaaggggactgccacggtgcagcaggaggtcccgcacttggcttgctgtgtt
tatcacatgacattaaaggatctgccagccatggtcaggctttggtggaacggctgtgag
aagaggattttcaacgtggtggacaaattcaccaccaagtatgttagcggcgtgctgtcc
tcccaggaaatctgctccgttcagtcaagcacacaagtctttgatggcatgaccgttaag
gcccgctcaactacccgggaagtgatcgccacctactctattgatgacatctgcatggag
ctgatcattcagctgccacagaattaccctctgggttcaatcacggtagaaagtggccgg
cgggtcggggtggctgtgcagcagtggaggaattggatgcttcaattgaacacttacctc
acccaccagaatggaagcatcatggaaggcttggccctgtggaagaacaacgtggataag
cgcttcgagggagttgaagactgcatgatttgcttctctgttatacacggctcaaactac
tccttaccaaagaaagcctgccggacctgcaagaagaaattccactccgaatgcttgtac
aagtggtttacgtcaagcaacaagtcaacgtgccccctctgcagagagacctttttctga
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integrated database retrieval system
