Xenopus laevis (African clawed frog): 100381134
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Entry
100381134 CDS
T01010
Symbol
cacna1s.S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04020
Calcium signaling pathway
xla04260
Cardiac muscle contraction
xla04261
Adrenergic signaling in cardiomyocytes
xla04270
Vascular smooth muscle contraction
xla04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100381134 (cacna1s.S)
04020 Calcium signaling pathway
100381134 (cacna1s.S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
100381134 (cacna1s.S)
09153 Circulatory system
04260 Cardiac muscle contraction
100381134 (cacna1s.S)
04261 Adrenergic signaling in cardiomyocytes
100381134 (cacna1s.S)
04270 Vascular smooth muscle contraction
100381134 (cacna1s.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
100381134 (cacna1s.S)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100381134 (cacna1s.S)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
DUF2670
PRIMA1
Motif
Other DBs
NCBI-GeneID:
100381134
NCBI-ProteinID:
XP_018104736
Xenbase:
XB-GENE-5823879
UniProt:
A0A1L8H6Q1
LinkDB
All DBs
Position
2S:55473334..55609852
Genome browser
AA seq
1690 aa
AA seq
DB search
MLPSGTTMEEGTQKKKKRPLVPPAPRPPRSLFCLGLQNPFRKSCINIVEWKPFEVIILLS
IFANCVALAIFLPMPEDDTNSVNTILEKVEYIFLFIFTIEAALKIVAYGFILHSDAYLRN
GWNILDFTIVSVGLFSVALEQINRVQGVTAPGGSGFNVKALRAFRVLRPLRLVSGVPSLQ
VVLNSIIKAMVPLLHIALLVLFMIIIYAIVGLELFSGKMHKTCYFKATDVIATVEKPAPC
STTGQGRQCAINGSECRGWWPGPNNGITHFDNFGFAMLTVFQCVTMQGWTEVLYWVNDAI
GNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGAFQMLREQQAMDEDLRG
YLDWITHAEVMDPDMEPGDGFSQLEEGRSETESLYELEGINKFISFLKQWRHWHRLLRRK
CRALVKSRFFYWFVILIILLNTVTIATEHHNQPEWLTKAQDTANQVLLAMFTLEMILKIY
ALGFRSYFMSLFNRFDCFVVCTGILEILLVSSNIMSPLGISVLRCIRLLRIFKITRYWTS
LNNLVASLLNSVRSIASLLLLLFLFMIIFALLGMQMFGGKFDFEDTEIRRSTFDNFPQSL
ITVFQILTGEDWNTVMYNGIMAYGGPSSPGMFICIYFVILFVCGNYILLNVFLAIAVDNL
AEAENLTSAQKAKAEERKRKKLARVHPDKSEEEKLLLAKKLELKAKGEGIPTTAKLKIDE
FESNVNEIKDPYPSADFPGDDEEEEPEIPLSPRPRPLAELQLKEKAVPMPDASSFFIFGP
TNKFRVLCHRIVNATTFTNFILLFILLSSISLAAEDPIEPESFRNQILAYFDYVFTAIFT
TEIVLKMTTYGAFLHKGSFCRNYFNILDLLVVAVSLVSFGIQSSAISVVKILRVLRVLRP
LRAINRAKGLKHVVQCVFVAIKTIGNIVLVTTLLQFMFSCIGVQLFKGMFYSCTDTTKMI
QEECKGYFIVAKDGDSTQIELRERIWTHSDFHFDNVLSGMMSLFTISTFEGWPQLLYRAI
DSHSEDMGPIYNYRIEIAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKN
QRQCVQYALKARPLRRYIPKNQYQYKIWYLVTSSYFEYLMFALITLNTISLGMKHYGQTA
EFSHLSDILNVAFTGIFTVEMLLKLAAFKAKGYFGDPWNVFDFLIVIGSIIDVILSEIDT
PDPVVTPGSEDTSRISITFFRLFRVLRLVKLLSRGEGVRTLLWTFIKSFQALPHVALLIV
MLFFIYAVIGMQVFGKIAMVDGTQINRNNNFQTFPQAVLVLFRCATGEAWQEILLACSYG
KLCDPKSDFLPGEEYTCGTSFAYFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILG
PHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFCPHRVACKRLVSMNMPL
NSDGTVTFNATLFSLVRTALKIKTEGNFEQSNEELRMIIKKIWKRTSMKLLDQVIPPIGE
DEVTVGKFYAIFLIQEYFRKFKKRQEEYYGYRPKKNNVEIQAGLRTVEEEAEPEMQRAIS
GDLTAEEELERAMVEAAIEEGIYRRTGGLFGQEDNFPTEPVSPVHTTITSQRPLRFSEAG
SEDLESPVFLPDHVFFPPPRRNRNTNNSTLSRRLGERLETPEEGLKRNISEQWDVTTNAS
QEDLSDHFSL
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgcttccaagtggcacaacaatggaggaaggaactcagaagaaaaaaaagaggccccta
gtgccacctgctccacgaccgcctcgctcacttttctgcctcggactgcaaaacccattc
aggaaaagctgcataaacattgttgaatggaaaccatttgaggtgatcattctgttgagt
atatttgctaattgcgtggccctagccatcttcctaccaatgccagaggatgacaccaac
tcagtaaatacaatcctggaaaaggttgaatatatcttcctttttattttcaccattgaa
gcagctctaaagatagtagcatatgggtttattctccattctgatgcatatctacgcaat
ggctggaatattttggacttcaccattgtgtctgttggacttttctcagtcgccttggaa
caaatcaatagggttcagggtgtaacagcaccaggaggatctggctttaatgttaaagct
ctgagagctttccgtgttcttaggcctcttcgtttggtgtctggagtgccaagtcttcag
gtagtgctgaactctataattaaggctatggttccattactccatattgcattgctcgtc
cttttcatgattataatatatgctatcgttggattagaacttttctctggaaagatgcac
aagacttgttatttcaaagcaacagatgtaattgccaccgttgagaaacctgccccatgc
agcacgacaggtcagggccgccagtgcgcaataaatgggagtgaatgcagaggttggtgg
ccaggacctaacaatggcattacgcactttgacaattttggtttcgccatgctgactgta
tttcagtgtgtcacgatgcagggatggacagaggtgctatactgggtcaatgatgctatt
ggcaatgaatggccctggatttactttgtaagccttatccttcttggatcattctttgtg
ctgaatctagttttgggtgtcctgagcggagagttcaccaaggagcgtgaaaaagctaaa
tcacggggtgctttccagatgttgagagaacagcaagcaatggatgaggatctgcgaggt
tatttggactggatcacacatgctgaagtcatggacccagacatggaaccaggagatgga
ttttcacaactggaagagggtcgctcggaaacagaaagtctttatgaactggagggaatc
aacaagtttataagcttcttgaaacaatggcgtcactggcaccgactcctgcgcaggaag
tgtcgagctcttgtgaaatctagatttttctactggtttgttatccttatcatcttactt
aacactgttacgatagcaacagagcatcacaaccagccagaatggttgactaaagctcag
gataccgcaaatcaagtacttttggcaatgttcactttagagatgatactgaagatatat
gccttgggctttcgatcatactttatgtcactttttaatcgatttgactgctttgtggtg
tgtactggtattctagagattttgctggtctccagcaacattatgtctcctcttggaata
tcggtcctccgttgtattagattattgagaatcttcaagataacacggtactggacatcc
ttaaataatctggtggcttctcttctcaactctgtccgttctattgcttctcttctcctt
ctgcttttcctcttcatgatcatctttgctttgcttggaatgcagatgtttggtggcaag
tttgactttgaggatacagagattcgcaggagtacatttgataactttccacagtcgctg
atcactgtcttccagatattgactggggaggactggaacactgtcatgtataatggaata
atggcctatggtggtccttcttcccctggaatgttcatctgtatctacttcgttatcttg
tttgtctgtgggaattatatattgctgaatgtgtttcttgccattgcagtggataattta
gcagaggcagaaaacctcacatctgctcaaaaagcaaaggctgaggaacgtaagaggaaa
aagttagctcgtgttcatcctgataaatcagaagaagaaaaattgttactggcaaagaaa
ctagaactgaaagcaaaaggtgaaggtatacccactacagccaagctgaagattgatgaa
tttgagtctaatgttaatgaaatcaaagatccatatccatctgcagacttcccaggtgat
gatgaagaagaggaaccggaaattcctctaagtcctcgaccacggcccttggcagagctt
cagttaaaagagaaggcagtgcccatgcctgatgctagttctttcttcatctttggcccc
actaacaagttccgggttctttgtcatcgcattgtcaatgccacaacttttaccaatttt
atcttgctgttcattctgcttagcagcatctctttggctgctgaggatccaattgagcca
gagtcattccgtaaccagatccttgcttattttgattatgttttcactgccatatttaca
actgaaatcgttttgaagatgactacatatggtgcatttctccacaaaggctccttctgc
agaaattattttaacattcttgatcttctggtagttgccgtttctcttgtctcctttggt
atccagtcaagtgctatctctgtggtaaagattctgagggttctcagagttttgcgtcct
ctcagagcaataaaccgtgcaaagggcctgaagcatgtggtccaatgtgtttttgtagct
ataaaaaccattggaaacattgttcttgtgaccacccttctacagttcatgttctcttgt
attggagtgcaactatttaagggcatgttttacagctgcacagacaccaccaaaatgatt
caggaggaatgcaagggttactttattgtggcaaaggatggagactcaactcaaattgaa
ctgagggagagaatttggactcacagtgacttccactttgataatgtgctttctggaatg
atgtctctttttactatctctacctttgagggctggcctcagttgctgtatagagcaatt
gattcacattcagaggatatggggcctatctacaattatcgtattgagattgcaatcttc
ttcattatctacataatccttatagctttttttatgatgaacatctttgtggggtttgtt
atcgtcactttccaggaacagggggagcaggagtacaaaaactgtgagctagacaagaac
cagaggcaatgcgtacagtatgctttaaaggcacgtcctcttcgtcgatacataccaaag
aatcaataccagtataagatctggtaccttgttacctcctcatactttgaatatctgatg
tttgctctcatcacgcttaatacaatcagtcttggaatgaagcattatgggcagacagca
gagttcagtcatctgtctgatatccttaatgtggctttcactggaatcttcacagtggaa
atgttactaaagttggcagcatttaaagccaagggttactttggagatccctggaatgtt
tttgattttcttattgttattgggagtataattgatgttatcctcagtgagatagataca
ccagacccagtagtaactccaggctctgaagatacttctcgaatttccatcacatttttt
aggttgtttcgtgtcttgcgccttgtcaagcttctaagccgcggagagggagtcagaacc
ctcctttggacttttattaaatccttccaggcacttccacatgtggcactcctcatagta
atgctgttttttatctatgctgtcattggaatgcaggtttttggtaaaattgccatggtt
gatggaacacaaataaatcgcaacaacaactttcaaacgttccctcaggctgtattagtg
ctttttaggtgtgcaactggggaggcttggcaggaaattcttctggcctgttcctatgga
aagctgtgtgatccaaagtctgatttcctgcctggtgaggaatacacatgtgggaccagc
tttgcatacttctatttcattagtttctacatgctttgtgctttcttgatcatcaacctc
tttgtcgctgtgatcatggataattttgattatctgacccgtgattggtctattctgggg
ccacaccatctggatgagtttaaaaggatctgggcagagtatgacccggaagccaagggg
cgaatcaagcaccttgatgtagttacactccttcgacgaattcaacctcctcttggtttt
ggaaaattctgtcctcaccgtgtagcttgcaagagattggtcagtatgaatatgcctttg
aacagtgatgggacagtaacgtttaatgcaactttgttttcccttgtgaggacggcttta
aaaatcaagactgaaggtaattttgaacagagcaatgaagagttaagaatgatcattaag
aaaatttggaaaaggacaagcatgaagctgctagaccaggttataccaccaatcggagag
gatgaggtgacagtaggaaagttttatgcaattttcctcatacaagaatattttaggaag
tttaaaaaacgacaagaagagtattacgggtaccggccaaagaaaaataatgtagaaatc
caggctgggttgcgtactgtagaagaggaggcagagccagaaatgcaacgtgccatctct
ggtgacttgacagctgaagaggagctggagagagccatggtagaagcagccatcgaggaa
gggatataccggaggacaggtggactttttggccaagaagacaatttcccaacagaacca
gtgagccctgttcacactactatcacaagtcagcggccattacgtttttctgaagctgga
agtgaggatttagaatcccctgtttttcttccagaccatgtgttttttccacccccacgc
cgaaaccgcaataccaacaacagtacgttatcaaggagactaggagagaggcttgagact
ccagaagaaggcctaaagcgaaacatttcagaacagtgggatgtcactactaatgcaagc
caagaggacctaagtgatcacttctccttgtga
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