Xenopus laevis (African clawed frog): 100462763
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Entry
100462763 CDS
T01010
Symbol
trpv1.S, trpv1
Name
(RefSeq) transient receptor potential cation channel, subfamily V, member 1 S homeolog
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100462763 (trpv1.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
100462763 (trpv1.S)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100462763 (trpv1.S)
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Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_5
Ank_3
Ank_4
Ion_trans
COX14
Motif
Other DBs
NCBI-GeneID:
100462763
NCBI-ProteinID:
NP_001177322
Xenbase:
XB-GENE-6492384
UniProt:
D7QZ11
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Position
2S:7090431..7119698
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AA seq
838 aa
AA seq
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MKKMGSSTDIDETEETCASIETDESHSDDTNRSAQENRKKLKFCQAKYSIFSSPKPKGRR
FGKTETDRDMAPMDSVYQIESKVISPAIKFHRNLERGKLCNQLVRQSTSLESTSSCKDRT
FKLYDQRRIFDAAAYGDCEELDDLLVYLLRTHKRLTNEEFKEKETGKTCLLKAMLNLDKG
MNHTILLFLEIAEKTDNLKEFINSAYRDNYYRGQTALHIAIERRNMDLVQLLLQHGADVH
ARADGEFFRKAKGKAGFYFGELPLSLAACTNQTAIVRYLLQNQHSPANIAARDSFGNTVL
HALVDIADNTQENTAFVTKMYNEILVLGAQIKPSLKIEEIANKKGLTPLSLAAKTGKIGV
FAYILRREIKNLECRHLSRKFTEWAYGPVHSSLYDLSGVDTYEKNSVLEIIAYSSETPNR
HDMLLVEPLNKLLQDKWDHFVKRIFYFNFFAYIIYVIIFTIAAYYRPVDGSPPFPVQYGS
YLRTSGELITVIGGIYFFFRAIQYFTQRRPSLKALLADSYCEFLFFSQSVFLLLSTVLYF
CGRNEYVAFLVICLAMSWANVLYYTRGFQLMGIYSVMIEKLILSDMVRFLFVYLLFLFGF
AAALVTLIEDGEGRTDVNNTCGRRCCKPEPASYNNLYYTCQELFKFAIGMGDLEFTDNYK
YKPVFIFLLITYVILTYILLLNMLIALMGETVSKVAQESKSIWKLQRAITILDIEKSFLN
SFRDTFRSGKSVLVGITPDGKEDYRWCFRVDEVNWNKWNSNLGIIKEDPGNCHGFKSTLS
ASFRPRGRRWRSLVPHIKEINLGNENETVPEEVPLQIQPALSVQTVKEEDQEVTSKAE
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatgggcagttccaccgatatcgatgaaaccgaagagacttgtgcttcgatt
gaaaccgacgaatcccacagtgatgacaccaatcgcagtgcacaggagaacaggaagaag
ctaaagttttgccaggccaagtattccatctttagctcccccaaaccaaaaggccgtcgc
tttgggaagacagagacggatcgggatatggctcctatggactctgtgtaccagatagaa
agtaaagtcatatctccagccattaagtttcatcgcaatttggaaagaggaaaactatgc
aatcagctggtgaggcaaagtacatctttggaatctaccagcagctgtaaggacagaacg
tttaaactgtatgaccagagaaggatttttgatgcggctgcctatggggactgtgaagaa
cttgatgatctcctggtttatctgctgaggacacataaacggctcaccaatgaagagttt
aaagagaaagagacggggaaaacctgcctgctgaaagccatgctgaatttagataaaggg
atgaaccacacaatcctattatttctggaaattgcagaaaagacggataatttaaaagaa
ttcatcaattctgcttatagagacaactactacagaggtcagacagccctgcacattgcc
atcgaaagaaggaatatggatctggttcagcttttgttgcaacacggcgctgatgtccat
gccagggcagatggggaattcttcagaaaagccaaaggaaaggctggtttctattttggg
gagctgcctctgtccctagcagcgtgcaccaatcagacagcgatagtccgatacctcctg
cagaaccagcactctccagccaatattgctgccagagactcatttggaaacacagttctt
catgccctggtagacattgccgacaacactcaggagaacacggcatttgtgactaaaatg
tacaatgagatcctggtgctgggtgctcagattaagccttcactgaagatagaggagatt
gcaaataaaaaaggactcacccctttgtccttagctgcaaaaactggcaagattggggtt
tttgcctatattctgaggagagagattaagaatttagagtgcagacatctctctcgaaaa
ttcacagaatgggcatatgggccggtccattcctccctctatgatctgtcaggagtagac
acctatgagaagaactctgtccttgaaatcattgcctacagcagtgagacgccgaatcgc
catgacatgctattggtggagcctcttaacaaactgttacaagataaatgggaccacttt
gttaagcgcatattctactttaacttcttcgcgtacatcatatatgttatcatctttact
atagctgcctactacagacctgtcgatggaagtcctccattcccagtacaatatggcagc
tatctccgcacctctggcgagttaatcacagtcattggaggaatctatttctttttcaga
gctatccagtactttacacagagacgaccgtccttgaaggctttgcttgctgacagctac
tgtgaatttctgttcttttcccagtctgtcttcctcctgttatccaccgtactatacttc
tgtggaaggaatgaatatgtagctttcttggtgatctgtttagcaatgagctgggccaat
gtgctgtactacaccaggggcttccagctgatgggcatttattctgttatgattgagaag
ttaattctgagcgacatggtccggttcctgtttgtctaccttttgtttctttttgggttt
gctgcagctctggtgaccctcattgaagatggagagggcagaacagacgtgaataataca
tgcgggcggcgctgctgcaaacccgaacctgcctcctacaacaacctctactacacctgc
caggaactctttaagtttgccattggaatgggagatctggaatttacagacaactacaaa
tacaagcccgtgttcatctttctgctcattacctatgttattttaacatacattctcctg
cttaatatgttaatagccctgatgggggaaacagtaagcaaggttgctcaggaaagtaaa
agtatctggaaactgcagagagcaattaccatactggacattgagaaaagctttctgaac
tccttcagagacacattcagatcaggaaaatcggtccttgtaggaattacacccgacggc
aaggaggattacagatggtgctttagagtcgatgaagtgaactggaacaaatggaactca
aacttgggtataatcaaggaggaccctgggaactgtcatggatttaaaagcaccctcagt
gcgtcattccgacctagagggagaaggtggaggtcgttggtccctcacataaaagaaata
aatttgggaaatgaaaatgagacagttccggaggaagttccgttacagatacaacctgct
ttgtcagttcagacggtgaaagaagaagatcaggaggtgacatccaaggctgagtga
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