Xenopus laevis (African clawed frog): 100462915
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Entry
100462915 CDS
T01010
Symbol
cacna1h.L
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X2
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100462915 (cacna1h.L)
04020 Calcium signaling pathway
100462915 (cacna1h.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
100462915 (cacna1h.L)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100462915 (cacna1h.L)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100462915
NCBI-ProteinID:
XP_018092078
Xenbase:
XB-GENE-6492371
UniProt:
A0A8J0TWG3
LinkDB
All DBs
Position
9_10L:complement(119442221..119743455)
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AA seq
2454 aa
AA seq
DB search
MTDGERKEPFQPLAGDEIRVPIPPTSQAGDPSEEEDGGNAEKSALGSLGSGGSSGRGREQ
GMGSEEGEQVPYPALAPTVFFCLSQTTRPRSWCLRLVCNPWFEHVSMLVILLNCVTLGMF
QPCEDTNCMSERCNILEAFDGFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNWLDFFIVM
AGMLEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV
FFIFGIVGVQLWAGLLRNRCFMDTNFVMSYNFSSLRPYYQVDEAEDNPYICSSNRDNGML
KCQDIPPKMDCSHVYYSDFGSRNSCVNINQYYNVCRPGEFNPHKGAINFDNIGYAWIAIF
QVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQL
MQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTLRLYNNWQNKRRKKVQP
NSNMNGQGRHRKCKRRITSIHHLIHHHHHHHHHHYHITNGSPRGPRSSPEICDVEMKIMK
PKNQLRLPPASPTQSISPNNASFHSIYHADCHLEAPQRKSSKSSNASSNIRLNVGLNHSN
MNYPTIMPSQANKTSPSTLPKGKRNGSNAVSLLSSPVSMKVDSFGKTNHLVGEHGLCRSS
SKLSGLSVPCSLPSPQPSPLLCEIQSCPYCANLLENPDLEISDSESCESDSNGVYEFTQD
LRHGDQRDQVPKGRKLKKKPKEANKVYKLWEEFTVRLKRIVDSKYFNRGIMIAILINTLS
MGIEYHEQPEELTNALEISNIVFTSMFALEMLLKLLAFGIFQYIKNPYNIFDGIIVVISV
WEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLVKTMDNVATFCMLLMLFIFIF
SILGMHLFGCKFTWTADTGETVKDRKNFDSLLWAIVTVFQILTQEDWNMVLYNGMASTSS
WAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDATRSDTEEDKASGNFDEELEKLKELR
AAELKLYSLAVTPNGHLDPRSSMPPPIIMRTAATPMPTPKSSPCMDSSHPFGDSRRESNV
SMDPSICDQKSLASLRSTPCTPWGTYSNWGSRRSSWNSLGRAPSIKKKSQSGERESLLSG
EGKGSTDDDSDDCKSSPVTRVALHRRAGSLDTRGSLDIPDFLQVPMLRHSLSVSPLAMVP
SDYQDCNGKMMHVPSDLFVRVEKHREDPLDYEDDIEDSYCFRIRKMLEPYKPTWCKTHED
WSLYMFSPQNQFRVICQKVIAHKMFDHVVLVFIFLNCITIALERPDIDSNSLERIFLSVS
NYIFTAIFVVEMMIKVVALGFVSGENTYLQSSWNVLDGILVFVSIIDIIVSLASAGGAKI
LGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQL
FKGKFYYCEGLDTRNITNRSECTRARYKWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMY
DGLDAVATDVQPVKNHNPWMLLFFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEAR
RREEKRLRRLEKKRRKAQRRPYYAEYSPARLYIHTMCTSHYLDLFITCIICINVITMSME
HYNQPKSLEEVLKYCNYVFTIVFVFEALFKLVAFGFRRFFKDRWNQLDLAIVLLSIMGIT
LEEIEINASLPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFM
LLFFIYAALGVELFGKLVCNEENPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDT
LRECNSDDKHCLSYLPLISPVYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMD
AEIEMEMSRALTPASGGCTPASSGKGMEGGQDPLKSELPVLLKQTTGAVCQENVTLVIPE
SMEGTTLMNNTVPASSIYQQQALPLPIQPCVLGHEDGDFHKRDGLGSENLLAVKKISVSR
MLSLPNDSYMFRPVLPAKSSYPLQVVETTEDSSPHGSIASLHSQAGENNSLLKVPVDCQP
QPSVSNHQDPADMPKIPPPRACSRSPSLNRSLRRQEAIHMDSVDQGGDKDKDLDVESTES
LQMGTPSVTTLVPNLLCSLNVSLQGIPQPSPRLSPQPRHSSVLTHNHVYSQHSIPSRPSS
VSSGNSNPEESMFESSDLADEEVSHINSSAKGWRGSSNNRSHSVSPFISQSSSPPPLPPS
LKNCNSTVSLAGSSGKDLKKFYSVDTQGFLAKPCWGEDQRRHSIEICPSIDDGDSCFDLS
MEDKHCSSVLIRSDPEYINGVRRKKKMSPPCISIEPPMEDEGGTASRTKASENSMMLRRR
TPSCESTAYRDSLDLSDNQLGDQISKTDRRTQVPCRNEHLIIHSYSYDQMDGNGFSDLLS
NSGGSTPSSVFNEPVCFEMKQKDHNDLSGVSKGSLKTALEHVSNPTEDIIDNPL
NT seq
7365 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagaggaaagagcccttccagccactggccggagatgagatccgggtg
cccataccccctacgtcccaagcaggggaccctagtgaagaagaggatgggggaaatgca
gagaagtcagctctgggcagcttgggctctggaggttcttctggaagaggtcgtgaacaa
ggcatgggctcagaggaaggagaacaggttccatacccagccctggcgcccaccgtcttc
ttctgtctcagccaaaccacgcgtccacggagttggtgcctcagactggtctgtaatcca
tggttcgagcatgtcagcatgctggtcattttgctgaattgcgtcaccctggggatgttc
cagccctgcgaggatacaaactgtatgtcagagagatgcaacattcttgaggcatttgac
ggcttcatctttgcattctttgcggtggagatggttattaagatggtagcacttggcatc
tttgggcagaagtgttacctgggagatacgtggaattggctggatttcttcatcgttatg
gcagggatgttggaatattctctcgatggacacaatgtcagcctgtccgctatccgcact
gtacgtgttttaaggcctttaagagccattaacagggttcccagtatgaggatactggtg
accctgctgctagatactctgcctatgttaggcaacgtccttctcttgtgtttctttgtg
tttttcatctttggaatcgtcggcgttcagctttgggctgggctactgcgcaacaggtgt
tttatggatacaaattttgtaatgagttacaatttctcctctctgaggccgtactaccag
gtggatgaggcagaggacaacccttatatctgctcttctaaccgagacaatgggatgtta
aaatgccaggacatccctcccaaaatggactgctcccatgtgtactactcagatttcggc
agtaggaatagctgtgtgaatattaatcaatactacaacgtatgcaggccgggagagttc
aatccacataaaggggccattaattttgataacattggctacgcctggatagccattttt
caggttataaccctagaaggatgggttgatatcatgtactatgtcatggatgcacattct
ttttacaattttatatattttatactacttataatagtgggttctttcttcatgataaac
ttgtgcctggttgtgatagcaacacagttttctgaaacaaagcagcgtgagaaccagcta
atgcaggagcaacgggctcgttatctctccaacgacagcacaatcgccagcttctctgag
ccagggagctgctatgaggagctgctcaaatacatctgccacatcttcaggaaggttaag
cgaaggacgttaagactttataataattggcagaacaagcggaggaaaaaagttcaacca
aacagcaacatgaatggccaagggcgtcaccgcaagtgcaagcgacgtatcacttccatt
catcacttgatacaccaccaccatcatcatcaccaccatcattaccacattaccaacggg
agtccacgggggcccagatctagtccggagatctgtgatgtagagatgaaaatcatgaag
ccaaagaatcaacttaggcttcctccagcatcccccacccaaagcatttcccccaacaat
gcatcattccacagtatctaccatgctgactgtcatttagaggcgcctcagcggaaatca
agcaagtcttccaatgcctcctcaaacataagactgaatgttgggttaaaccacagtaac
atgaactatcccaccatcatgccctcccaagccaacaaaaccagcccttctacactaccc
aaaggaaaaaggaatggcagcaatgcagttagtttgctaagcagcccagtcagtatgaag
gtggattcatttgggaagaccaaccacctagtaggagagcatggcctgtgcaggagttcc
agtaagctttccggattgagtgttccatgttccttgccgagccctcagccaagccctcta
ctgtgtgaaatccaaagctgcccgtactgtgcaaacctcttggagaatcctgatttggag
ataagcgactctgagagttgtgagtcggattctaatggggtctatgaatttacccaggac
ttgaggcatggagaccaaagagaccaggtgccgaaaggtagaaagctcaagaagaaacca
aaagaggccaacaaagtgtataagctctgggaagagttcactgtccgactgaaaaggatt
gtggacagcaaatatttcaaccgcgggattatgattgccatcttgatcaacacgctgagt
atggggattgagtatcatgaacagccagaagaactgactaacgccttggaaatcagcaat
attgtgttcaccagcatgtttgcgctggagatgctgctgaagctgttggcctttgggatc
tttcaatacatcaagaatccgtacaacatctttgatgggatcattgttgtcatcagtgtg
tgggaaatcatcggccagtcggatgggggtctgtctgtgcttagaacgttccggctactt
cgtgtgctgaagctggtgcgatttatgcctgccctgcgtcgtcagctggtggtactggtg
aagactatggacaatgttgccaccttctgcatgcttcttatgctctttatctttatcttc
agcatccttggcatgcatctgtttgggtgtaagtttacttggactgcagacaccggagaa
acagtcaaagacagaaagaactttgattccttgctttgggcaattgtcaccgtcttccag
attctcacccaagaagactggaatatggtcctgtacaacggcatggcttccacctcctcc
tgggcagcgctctactttgtggccctgatgacatttggaaattacgtgcttttcaacttg
ttagtagccatcttagttgaaggcttccaagcagagggggatgcaacaaggtcagataca
gaggaggacaaggcatcaggcaactttgatgaagagctggagaaactaaaggagctccgt
gctgcagaactaaagttgtattcactcgcagtgacgcctaacgggcatctcgaccctcga
agttccatgccccctcctataatcatgcgcactgctgccaccccaatgcctacaccaaag
agctccccatgcatggattcatctcatccatttggtgattcaagaagggaaagtaacgtc
tcgatggacccgtccatctgcgatcagaagtctttggccagtctacgcagcaccccttgt
accccttggggcacttacagcaactgggggagccgtcgctcaagctggaacagtctgggt
agagcgccgagcatcaaaaagaagagccagtcaggggagagggagtccttactctctggt
gaaggaaaggggagcacagatgatgactctgatgactgcaagtcaagcccagtgacaagg
gtagctctccatcgcagggcaggttctcttgacacacgaggttctttggatatccctgat
ttcctacaggttcctatgttacgtcattccctaagtgtcagccctttggctatggttccc
tcagattatcaagactgcaatgggaaaatgatgcatgtgcccagtgatctgtttgtgcgg
gtggagaaacacagggaggatccgttggattatgaagacgacatagaagacagttactgt
ttccgaatccgaaagatgttggagccatacaaacctacatggtgtaagacacatgaagac
tggtccctctacatgttctcacctcaaaaccagttccgagtgatatgccaaaaagtcatt
gcccacaagatgtttgaccacgtggttcttgtctttatcttcttaaactgcatcaccatt
gcgcttgaacggcccgacattgactccaatagcctggaacggatattcttaagtgtctcc
aactacatttttactgcaatctttgtggtagaaatgatgatcaaggtggtggccctgggc
ttcgtctccggggagaacacttacctgcagagcagctggaacgtgctcgatgggattctc
gtcttcgtttccataattgatatcatcgtgtcccttgcatctgccgggggagcaaaaatt
ctgggagtcttgcgggtattgaggctgctgcggactctgcgcccacttagggttatcagt
cgagccccaggcctgaagctggttgtagagactctcatctcctccctgaggcccattggc
aacatcgtccttatctgctgcgctttcttcattattttcggtattctgggagtacagctt
ttcaagggcaagttctactactgtgaaggacttgatacacggaacatcaccaacaggtca
gagtgcacccgggcgcgttacaagtgggtgcggcgcaagtacaactttgataacctgggc
caggctctcatgtcgctctttgtcctgtcctccaaagatggctgggtgaatatcatgtac
gatggcctggacgctgttgccacagatgttcagccagtcaaaaaccacaacccgtggatg
cttctgttcttcatctccttcctcctcatcgtcagcttcttcgtgctcaacatgttcgta
ggggtggtggtagagaacttccacaagtgccggcaacaccaagaggcggaagaggcccgg
cgcagggaggagaaacgcctccgccgcctggagaaaaagcgcaggaaggcccagcggaga
ccgtattatgcagagtactcgccagcacgactctacatccacactatgtgcaccagccac
tacctggatctcttcatcacctgcattatttgcatcaacgtcatcacaatgtccatggaa
cactacaaccagccaaagtccctggaagaagttttaaaatactgcaactacgtgttcacc
atcgtcttcgtgtttgaggccctgttcaagcttgtggcatttgggttccggaggtttttt
aaagacaggtggaaccaactggacttggccatagttttgctctccatcatgggaatcaca
ttagaggagattgagattaacgcctcacttcccatcaatccaactattatacgtatcatg
agggtgctgaggattgctcgagtgttaaagctcctgaaaatggccaccgggatgagagct
ttgttggatactgttgtgcaagccttacctcaggtcggcaacctcggcctgctcttcatg
ctcctgttcttcatctacgcggccctgggagtggaactgttcggaaagctcgtgtgcaat
gaggagaatccctgtgagggactcagccggcacgcaacgtttgagaactttgggatggct
tttctgaccctctttcgcgtctccacaggagataactggaatggcattatgaaggacact
ctacgggagtgcaacagcgatgacaagcactgtctcagctacctgcccctcatctctcct
gtctatttcgtaaccttcgtgctcattgcccagtttgtcttggtcaatgtggttgtggct
gtgctcatgaaacatctggaggagagcaataaagaggccaaagaagatgctgagatggat
gcagagattgagatggagatgtccagggcactgacgcctgcgagtggtggttgtactcca
gcctcaagtggaaagggaatggagggaggacaagatccattaaagtcagagctacctgtg
ctgctgaaacaaaccacgggggcagtgtgccaagagaatgtgaccttagtgatcccagag
tcaatggagggtacaaccctgatgaacaacacagtccctgcttcctccatataccaacag
caggccctgccacttcccatccagccttgcgtccttgggcatgaggatggagatttccac
aagagagatggattaggttctgaaaacctactggctgtcaaaaagatctcagtatccagg
atgctctccttacctaacgacagttacatgtttcggccagttctaccagcaaagtcatct
tatcctttgcaagtagtggagaccactgaagatagttcaccacatgggtcgattgcctct
ctccactcccaggctggggaaaacaactccttgctgaaagtaccagtggattgccagcca
cagccctctgttagcaaccaccaggaccctgccgacatgcctaaaattccaccaccacgt
gcatgttcaagatctccaagtctaaacagatctctgagaagacaggaggctatacatatg
gactcagttgatcagggcggtgataaggacaaggaccttgatgtggaatctacagagagt
ttgcagatggggactccatcagttactactttagttccaaatttgctgtgctccttaaat
gtgtctctgcagggaatccctcagccctcacccaggctatctccccagcccagacattcc
agcgtcctcacacacaaccatgtgtacagccaacacagtattccaagtcggccttcgagt
gtcagtagtggaaacagcaacccagaggaatctatgtttgagtcctcagacctggctgat
gaagaagtcagccacataaacagttcagcaaaggggtggagaggatcatctaataataga
agtcactctgtatctccgttcatctcccaatcttcatctcctcctcctcttcctccatca
ctaaagaactgcaatagcacagtcagcctggcagggtccagcggcaaagacttaaagaag
ttttatagtgttgatactcaaggattcttagctaagccctgctggggggaagaccaaagg
aggcactcaattgaaatctgcccttccattgatgatggagattcctgctttgacctatcc
atggaggacaaacattgctcttctgttctcattcggtctgaccctgaatacatcaatgga
gttcgtcgaaagaagaagatgagtcccccttgcatttctatagaacctcctatggaggat
gaaggtggaacagcttcacgtaccaaagcatcagaaaacagcatgatgttacgaagaagg
accccatcctgtgaatctactgcatacagggactcgttagatctaagtgacaaccagctt
ggggaccaaatatctaaaactgataggcgaacccaggtgccctgtcgcaatgaacactta
atcatacacagctactcatatgaccagatggatggaaatggcttctcagaccttctgtct
aacagtggaggttctactccgtcatctgttttcaatgaacctgtctgtttcgagatgaaa
caaaaagatcataacgatttaagtggtgtttctaaaggttctttgaaaactgcactagaa
cacgtatccaacccaacagaggacataatcgataacccattatag
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integrated database retrieval system
