Xenopus laevis (African clawed frog): 100462926
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Entry
100462926 CDS
T01010
Symbol
cacna1b.S
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X3
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100462926 (cacna1b.S)
04020 Calcium signaling pathway
100462926 (cacna1b.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
100462926 (cacna1b.S)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100462926 (cacna1b.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
100462926
NCBI-ProteinID:
XP_018084938
Xenbase:
XB-GENE-6492360
UniProt:
A0A8J0TIF4
LinkDB
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Position
8L:2732670..2832261
Genome browser
AA seq
2364 aa
AA seq
DB search
MARFGDDLPTRYGTGVPGGVGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNIIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPEHDKTDMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKACFSDDSDEPVGDFPCGEELPARLCENGTTCRVYWKGPNFGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAVGFMWNWLYFIPLIIVGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRATIKKSKNDLI
HAEEGDDHFNDICSVGSPFARSSLKSGKNESSYLRRKEKMFRFFIRRMVKAQSFYWFVLC
VVALNTLCVAIVHYNQPQWLTEALYYAEFVFLGLFLTEMSMKMYGLGPRNYFHSSFNCFD
FGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSIV
SLLFLLFLFIVVFALLGMQLFGGQFYFEEETRNTNFDTFPTAILTVFQILTGEDWNLVMY
FGIESQGGVSKGMFSCIFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEATN
QKLALQKAKEVAEVSPMSATNLSITAFVKQTQGAISRSSSVSNVNSPNVSLPAGIKTQLS
AWELAPIYGRHLHAMDPCKQQNSTKCRSVWEQRASQIRKHNFNASSEALYSELEPEERLR
YATTLQLRPDMKSHMDRPLLVEPQDSTETKDDSPDPPAPNEIDPVPGVTSEPSARKPHRH
RDRGSGEPNGGGRENGNHNGDSASNDREEHQRQHRSHSKEGEGGKETGRGERNRSQERGK
RHHRRASPEDGTEREHRRHRNHRHSADRQGKEGNGQPPSGGKGERKSRHRGGGSRSGNRE
GDGTYRGTGENGDESQRSRHRNRHKALSTYDTEDKKENKDGESAEKEHRNHRPRENRNES
ELPPGGLQQLTEQPEDADNQKNVNRMALPHPDRSSTINIPVTITAPPGESAVIPINNVDF
DGKSEEKKEMEDDLTKNGPKQILPYSSMFIFSTTNPVRRLCHYIVNMRYFEMVILVVIAL
SSIALAAEDPVQADSPRNDVLKYMDYIFTGVFTFEMVIKMIDLGLLLHSGSYFRDLWNIL
DFIVVSGALVAFAFSSFVGGNKGKDLNTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNS
LKNVLNILIVYMLFMFIFAVVAVQLFKGKFFYCTDESKDLEKDCRGEYLHYENNDVRAQA
REWKKYDFHYDNVLWALLTLFTVSTGEGWPNVLKHSVDSTYEDQGPTPGFRMEISIFYVV
YFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFVISAKPLTRYMPQNRQ
SFQYKMWRFVVSPPFEYFIMVMIALNTIVLMMKFYGAPQTYEDMLKCLNIIFTSMFSLEC
ILKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIAENFINLSFLRLFRAARLIKLLR
QGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALSDDNSINRHNNFRT
FFQALMLLFRSATGEGWHEIMLSCLSNRPCDPRSGNTKEECGSDFAYFYFVSFIFLCSFL
MLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIGYTDMYEMLRHMPP
PLGLGKKCPARVAYKRLVKMNMPISDTDLTVHFTSTLMALIRTALDVKLASGGIKQHECD
AELRKEITSVWPNLSQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQNKNNRDQSHPQS
GVLSQTGTVSLFQPLKATLEPFGNSKMFIRQKSSASLNNGGVVPDQDTGIRESSSWGTQP
ATDPFSTPRSTTFQRGNSEEIHAQRNGKQSVEMKQIGQTLSNGGEHPTGLESQGRAVSMP
RLAAETHPRSRVPSPGNGYLPSIPDSSPMKRSVSTLTPPQRAQLYEYSLERVPPERTHQH
HHRCHRRKERKQKSMERSPQSEDADAPTRERKHERGRSQERKQQPPSSSEKQRFYSCDRY
GSRDSGHPRHCDHSRAPSPSAGQDHSTHRQGSGSASGSPRLTSSGASTPCRGIRRQLPQT
PLTPRPNVTYRTAHSSPVHFGGPAYSPGRLSRGLSEHNTLLYSDSPSHSASTVTRVGSDP
YLGPRQDSDSYCPLSEETLTFEEALASNSGRSSRTSYVSSLTSHSHQLCRVPNGYHYTLG
LSTGPATAPRGRSYYHEADEDDWC
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atggctcgttttggagacgatttacccacccgctatggaaccggcgtgcctgggggagtg
ggaaggggcagcagccggcaaggtggcccccaggccggccagaggatgtacaagcagtcg
atggctcagagggctcggaccatggctctctataaccccatccccgtcaaacagaactgc
ttcaccgtcaatagatccctgttcatcttcagtgaggataatattatccgcaaatatgcc
aagaggatcaccgagtggcctccatttgaatatatgattctagcaacaatcattgccaat
tgcatagtcttggctttggaacagcaccttccggaacatgacaagacggacatgtctgag
aggctggatgacacagagccatactttattggaatattctgtttcgaagccggcatcaaa
attatcgccttgggctttgttttccataaaggctcctacctccggaatggttggaatgtc
atggatttcgtggtggtactgaccgggattctggcgacagctgggacagactttgacctg
cggacgctgcgggcggttcgagtgctgagacctctaaagctggtgtctggaattccaagc
ctgcaggtggtattgaagtccatcatgaaggcgatggttcccttgctccagatcggccta
ctcctcttcttcgctattgtcatgttcgctattattggcttggagttttatatgggcaag
ttccacaaggcctgcttttctgatgactcagatgagcctgtaggagatttcccctgtggg
gaagaacttccagcccgactctgtgaaaacgggaccacgtgtcgggtttattggaagggg
ccgaattttggaatcaccaactttgataacatcctgtttgcagttctgaccgtgttccag
tgcatcactatggagggatggacagacatcctgtacaacacaaacgatgctgtgggtttc
atgtggaactggctctattttatcccactcataattgttggctctttcttcatgctgaac
ctggttctgggtgtcctctcaggggaatttgctaaggaacgagagcgagtagaaaatcga
cgggccttcctcaaactccgacggcagcagcaaattgaacgtgaattaaatggttacctg
gagtggatcttcaaagctgaggaagtcatgttggctgaggaggataagaatgcagaggag
aagtcccccttagatgttctcaagagggcaaccattaagaaaagcaaaaacgaccttatc
cacgctgaggagggggacgatcatttcaatgacatctgttctgtgggttcaccctttgcc
cgttcaagtctcaaaagtggaaagaacgagagttcttaccttcgccgaaaagaaaagatg
ttcaggttcttcatccgccgcatggtgaaagctcagagtttctattggtttgtactctgt
gtggtggcgcttaacactctctgcgtggccatagtacactacaaccagcctcagtggctc
actgaagccttgtattatgcagagtttgtgttcctgggacttttcttgacagaaatgtcc
atgaagatgtatggtctgggaccccgcaattacttccactcatccttcaactgcttcgat
tttggcgtaatagtcggaagtatttttgaagtcatatgggctgcggtgaaaccaggtacc
tcctttggcatcagcgtccttagagctctgcgacttcttcgcatctttaaggtgaccaag
tactggaactccttaagaaatctggtggtgtctcttctcaactccatgaagtccattgtc
agcctacttttccttctgttcctcttcatcgtggtgtttgctctgcttggaatgcagcta
tttggtggacagttttattttgaggaggaaacacggaacacaaactttgacaccttccct
actgcaatccttactgtgtttcagattttgacaggagaagactggaatcttgtcatgtat
tttggcatcgagtcacaggggggtgtcagcaaaggaatgttctcgtgcatctttttcatc
gttctgacactgtttggaaactatacccttctaaatgtcttcttggccattgctgtggat
aacttagcaaatgcacaagaactaaccaaggatgaagaagaaatggaagaagccaccaac
cagaagctggcgctacaaaaagctaaagaagtggcggaagtcagccccatgtccgcgacc
aacttgtcaatcacagcttttgtaaagcaaactcaaggtgcaatatctcggagctcgtcc
gtctccaacgtaaattcaccgaatgtgtcgctccccgcgggtattaaaacccaactctca
gcctgggagctggcgcccatctatggccgacatctgcatgccatggatccttgcaaacag
cagaattccaccaagtgtcgctctgtgtgggagcagcgagccagccagattcgaaagcac
aatttcaacgctagcagtgaggccctctacagcgagttggaacctgaggaacggctgcgc
tatgccaccaccctacagctaaggcctgatatgaagagtcatatggaccggccacttttg
gttgagccacaggactcaaccgagacaaaagatgatagcccagatcccccagctccaaat
gaaatagacccagttcctggtgtgacttctgagccctcggcgcgtaaaccgcaccggcac
cgtgatcgaggcagtggagaacccaatggtggagggagagagaacggtaatcataatgga
gattcagcaagtaatgacagagaggagcatcaacgtcaacataggagtcacagcaaagaa
ggtgaaggaggtaaggaaacaggaaggggagagaggaaccgcagtcaggaaagggggaag
cgacaccatagaagggcatcccctgaggacgggacagagagagagcatcggcgacaccgt
aatcatcgccattcagcagacaggcaaggcaaagaaggcaatggccagccaccctctggg
ggtaagggtgaaagaaagtcccggcacaggggtggtggttcaagatctggaaacagagag
ggggatggaacttacagaggaactggggagaatggagatgagtctcaaaggtcacggcat
cgcaatagacataaagcactctctacatatgacacagaagacaagaaggagaacaaagat
ggtgaatcagcagaaaaagagcaccgcaatcataggccaagggaaaaccgcaatgagtcg
gagcttccacctggtgggttgcagcagttgactgagcagccagaagatgcagataaccag
aagaatgtcaaccgcatggcactgccccatccagaccgaagcagcaccatcaatattccg
gtgaccatcacggcaccacctggagaaagtgctgtcataccaatcaataatgtggatttc
gatgggaagtctgaggagaagaaggaaatggaagacgatctcaccaagaatggtcccaaa
cagatcttgccttacagttccatgttcatctttagtaccaccaatccagtccgtcgtctc
tgccattacattgtcaacatgcggtactttgagatggtcatcctggtagtgattgcactg
agcagcattgccctggccgcagaagatccggtgcaggccgactcaccccgcaatgatgtt
cttaaatacatggattatatatttactggagtcttcacctttgagatggttattaagatg
attgacctcgggctgctgcttcactcgggatcttattttagagatctgtggaacattttg
gatttcattgtggtcagcggcgccctggtggcctttgcgttctcgagttttgttggagga
aacaaaggaaaagatctgaacaccatcaagtctttgagggttttgcgtgttttacggcca
ctgaaaaccatcaaacgtctgcccaagctgaaggcggtgtttgactgcgtagtgaactct
ctgaagaacgtcctgaacattctgatcgtttacatgctcttcatgtttatctttgctgtc
gtcgcagtccagctcttcaagggcaagttcttctactgcacagatgagtctaaagatttg
gagaaggactgcaggggggaatatctgcattatgaaaataatgatgtgagggctcaggca
agagagtggaagaaatatgattttcactatgacaacgtactgtgggcattgctcaccctg
ttcacggtctccactggagaaggttggccaaatgtcctcaaacattcagtagattccacc
tatgaggatcagggtccaacccctggtttcaggatggagatatcaatcttctatgtggtt
tattttgtagtgttcccatttttctttgtcaacatttttgtggctctgattatcatcacc
tttcaggagcaaggggataaggtcatgtcggagtgtagccttgaaaagaacgagagggcc
tgcatagactttgtcatcagtgccaagcctctcactcgatatatgcctcaaaaccgccag
tcttttcagtacaagatgtggcgatttgttgtgtctcctccatttgaatactttatcatg
gtgatgatagctctgaacaccattgtgctcatgatgaagttttatggggccccgcaaaca
tatgaagacatgttgaaatgcctaaatattatcttcacctcaatgttctctctggaatgt
atcttaaagataatcgcctttggggtactgaattatttcagagacgcctggaatgtgttt
gactttgtcaccgtgctgggaagtatcactgatattttagttacagagattgcggaaaac
ttcatcaacttgagcttcctgcgacttttccgagctgcccgactgatcaaactgctacgt
caaggatacaccatacgaatccttctctggaccttcgtgcagtcttttaaggccttgcca
tatgtctgcctcctgatcgccatgttgttcttcatctatgccattattggcatgcaggta
tttggaaacattgcattgtccgatgataactccataaacagacacaacaacttccgcacc
ttctttcaagctctgatgctcctgttcaggagtgccaccggtgagggctggcatgaaatc
atgctgtcttgcctcagtaatcgaccctgcgatcctcgctccggcaacaccaaagaagaa
tgtggcagtgactttgcatatttctattttgtctctttcatcttcctgtgctctttcctg
atgctgaatctttttgttgctgtcattatggataattttgagtacctgacaagagactct
tccatcctgggaccacatcatcttgatgagtttatcagagtctgggcagagtatgatccg
gctgcttgtgggcgcattggttacactgacatgtacgagatgctgcgacacatgccccct
ccccttggtctggggaagaaatgccctgcacgtgtggcatataagcgtctcgtaaaaatg
aatatgcctatctctgatacagacctgactgttcatttcacctccaccttgatggctttg
atccgaactgctctggatgttaaattggcttcaggtggaattaaacagcatgaatgtgat
gctgagctgaggaaagaaatcacatctgtgtggcccaacctgtcacagaaaactctggat
cttctggtaccacctcataagcctgacgaaatgactgttggaaaggtctatgctgccctg
atgatatttgacttctacaagcagaataaaaacaaccgtgatcagtctcacccacagtct
ggtgtcctttctcagactggtacagtctcccttttccagccattgaaagctactttggaa
ccgttcggaaattccaaaatgtttattcgtcagaagagctcggcttctctaaacaatggt
ggtgtggtgccagatcaagatacaggtattcgagaatcaagttcttggggaacccaacct
gctacagatcccttttctactccgaggagcactacattccaaagagggaactcagaggag
atccatgcacaaagaaatggcaaacagtctgtagagatgaagcaaatcggacagactttg
tctaatggaggagaacaccctacgggcctggagtctcagggtcgtgcagtttccatgcca
cggctagcagctgaaacccacccgagaagccgcgttccttctcctggaaatggttacctg
ccatcgattcctgatagcagtccgatgaagcggtcagtttccaccctgacaccgccgcag
cgagcccagctgtatgaatactccctagaaagggtcccacctgagcgcacacaccagcac
catcaccggtgccaccggcgaaaggagagaaagcaaaaatcgatggaaagatcgccacaa
agcgaggacgcagatgcccccaccagggagagaaaacacgaaagaggacgatcccaagaa
aggaaacagcagcctccatcttcatcggagaaacagcgattctactcctgtgaccgatat
ggaagccgcgactccggccaccctcgtcactgtgatcacagccgggcaccatcacctagt
gctggacaagaccatagcacacacagacaaggcagcggttcggccagcggaagtccacga
ctcactagttccggtgctagcaccccatgccgggggatccggagacaactccctcagact
cctctcacccctcggcccaatgttacataccggacagctcactcctcccctgtgcacttt
ggggggcctgcttattccccaggacgtctaagtcggggtttatcagagcacaacacccta
ctgtacagcgattcccccagccactcagcgtccacagttactcgcgttgggtccgacccc
tacttgggaccacgccaggatagtgacagttactgtcctttgtcagaggagacattaacc
ttcgaggaagccttggccagcaattctggacgttcatcccggacttcctatgtgtcttct
ctgacctcacattcacaccagctctgcagggtaccaaatggttaccactacaccctgggg
cttagcactgggcctgccacagctccaagaggccgaagctactaccatgaagcagacgag
gatgattggtgctag
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integrated database retrieval system
