Xenopus laevis (African clawed frog): 101027303
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Entry
101027303 CDS
T01010
Symbol
sox6.S, sox6, xSox6
Name
(RefSeq) SRY-box 6 S homeolog
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
101027303 (sox6.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101027303 (sox6.S)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101027303
NCBI-ProteinID:
NP_001267587
Xenbase:
XB-GENE-17337584
UniProt:
J7M5I3
A0A974D0S7
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Position
4S:complement(22383259..22612357)
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AA seq
760 aa
AA seq
DB search
MSSKQAASPFTCKAEGEEEMTGDLASREINECKDQIMASHLPLHPLNHNKPHSEELPSLV
TTLPADVDWDSMISSQHRMDSESNKLRSLYSFRTMSTSPHKPDEGARERSDLMSGVNFGT
PERRKGSLADVVDTLKQKKLEEMTRSEQEDSTCVEKILSKDWKDKMDRLNTSELLWEIKG
TPESLAEKECQLSTMITQLISLREQLLAAHDEQKKLAVSQIEKQRQQMDLARQQQEQIAR
QQQQLLQQQHKINILQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGLSYKP
GDNYPMQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGAKMPTTPQPTNAMGALSP
TAMKSEKRGTSPVAQIKDEAAQPLNLSARPKTADPVKSPTSPTQNFFPVSKTSPVSLTNK
SRIPSPIRGTSLDILSSLNSPALFGDQDTVMKAIQEARRMREQIQREQLHTSYGLDGKLP
LNNMGLNNCRGDKERTHFENLGPHLTGKPNKEGKLGPGVIDLTRPEDIEGGATVVEARVY
RDARGRSSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQ
PYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVG
QQPQIPISTATGVVYPGAISMTTTTPSPQMTSDCSSTSASPEPSIPVIQSTYGMKLDSGS
LVGNDLMNGEDEIEMYDDFEDDPKSDYSSENEANEAVSAN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcaagccgcctctccattcacttgtaaagcggaaggagaggaagagatg
actggggatttagcgtcacgagaaataaacgaatgcaaagatcagatcatggcctcccac
ctgcccctgcaccccctcaatcacaacaaacctcactccgaggagctaccgtcacttgtc
actaccctcccggccgacgttgactgggacagcatgatctcttcccaacatagaatggac
tcagagagcaataaactccgttccctgtactccttccgaaccatgtctacctcaccccac
aagcctgacgaaggggctcgcgagcgcagtgacctcatgagcggtgttaactttgggaca
cccgagcggcgcaaaggaagtttggcggatgtggtggatacgctgaaacagaaaaaactg
gaggaaatgacacgatccgagcaggaggattctacttgtgtggagaaaattctctccaaa
gactggaaagacaaaatggatcggctgaacacgagtgagcttctctgggagattaaaggc
acaccggagagtttagcggagaaagagtgtcagctttccaccatgatcacccaactcatt
agcctccgagagcaactcctggcagcccacgatgaacagaagaaactggcagtttcacag
attgagaaacagaggcaacaaatggatctggcacggcagcagcaggaacagatcgcaaga
cagcagcagcaactcctgcagcagcagcacaagatcaacatcctgcagcaacaaattcag
gttcaggggcacatgcccccccttatgatcccgatattcccacatgaccagcgcacgttg
gcggcggcagcagctgcacagcagggattcctcttccccccaggactttcctacaaacca
ggtgataactaccccatgcagttcattccatctacaatggcagctgctgccgcttctggg
ctcagtcccttgcaactgcagcaactgtacgcagcgcaactggccagcatgcaagtgtct
cccggtgccaaaatgcccacgaccccacagccgacaaacgccatgggagctctgtcacct
acggccatgaaaagtgaaaaaagagggaccagcccagtagcacaaattaaggacgaagca
gcgcaacctctgaatttgtccgcccggccgaaaacagccgaccccgtcaaatctcccacg
tcccccacccaaaacttcttcccagtcagcaaaaccagcccagtgagtctgaccaacaag
agcagaatcccaagtcccataaggggaacgtccctagacatcctttctagtcttaattca
cctgccctgtttggggaccaggacacagtcatgaaagctatccaggaggctcgcagaatg
agagaacagattcagagagagcagctgcacacctcgtatggactcgacgggaaattgccc
ctaaataacatgggcttgaacaactgcagaggagataaggagagaacccactttgaaaat
ctcggccctcatttaactgggaaacccaacaaggaagggaaattggggcctggagtcatc
gatctcacaagacctgaagatatcgagggaggcgccactgtcgttgaggctcgagtctac
agggacgcaaggggtagaagtagcagtgaacctcatatcaagcgaccaatgaatgctttc
atggtttgggcaaaggatgagagaaggaaaattctccaagctttcccggacatgcacaac
tccaacattagtaaaattttaggctctcgttggaaatccatgtctaaccaggagaagcaa
ccatactatgaagaacaagctcgactaagcaagattcacctcgagaaataccccaactac
aagtacaaacctcggccgaaacgtacctgtattgttgatggcaaaaagctacgtattgga
gagtacaagcagttgatgaggtctcgaagacaggagatgagacagttctttactgttggg
caacagcctcagataccaattagcacagcaactggggttgtgtatcccggtgccatttcc
atgacaacaacaacgccatcacctcagatgacatcagattgctccagcacgtccgccagc
cccgaacccagcatccctgtcatacagagcacatatggcatgaagctggacagtgggagc
cttgttggcaatgacctgatgaacggagaagacgaaatagaaatgtacgatgactttgag
gatgatcccaaatcagactatagcagtgaaaacgaagccaacgaagctgttagtgccaac
tga
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