Xenopus laevis (African clawed frog): 101027308
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Entry
101027308 CDS
T01010
Symbol
abca3.S
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101027308 (abca3.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xla02000
]
101027308 (abca3.S)
Transporters [BR:
xla02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
101027308 (abca3.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_15
AAA_29
RsgA_GTPase
ABC2_membrane_7
Motif
Other DBs
NCBI-GeneID:
101027308
NCBI-ProteinID:
XP_018094715
Xenbase:
XB-GENE-6487136
UniProt:
A0A974H1R9
A0A1L8EQN4
LinkDB
All DBs
Position
9_10S:complement(100089932..100133464)
Genome browser
AA seq
1700 aa
AA seq
DB search
MAVFRQLGLLLWKNYILQKRQILVTVIELALPLLFSAILIALRHRVQSVTYPNATLYKDV
SFPYLPFIPGPRPWELAFVPSHSKAAQEIVTEVGQSLSLYSVARGFPTEEDFEDYIRHNN
HSSKILAAVVFEHHFNDSEDPLPLQVRYRLRFKYSPRNAPMSERTGLNPNVDRNWHTRYL
YPLFQMPGPREAGDKTGGTPGYQREGFLAMQHAVDRAIMWYHANESGRSLLDSIDVAIRR
FPYPPYVNDLFILAIQNQLPLLLMLSFTYTSLSIVRALVLEKERKLKEYMRVMGLSTWLH
STAWFIHFFLLLLVSAFFVTLLLCIQVSSEGAVLTRSDPSLVFVYILSFSVSTISFSFMI
SSFFSRANMAAAAGGFLYFLSYIPYFFISPWYDELNHGAKVSSCLLSNVGMAMGAQLIGM
FEGKGTGAQWSNLFTPVSVDDNFTLGQVLQMLLLDSVFYFLVGWYVESIMPGDYGVPQPW
YFCFLPSYWCGKPRLVEGLEKEDDEDPEKALKGEYLEEEPSDLVPGIRIKHLTKVYRVSG
KKRIAVRDVTLNMYEGQVTVLLGHNGAGKSTTLSMLTGLCPPSSGECYIGGYEISRDTAL
IRRSLGLCPQHDVLFQGLTVEEHLYFYAGLKGCPRWSCLEEVEKILQILRLEEKRNALST
QLSGGTCRKLSIGIALIGGSKVVMLDEPTSGMDPASRRDTWELLRQHKHDRTLLLTTHFM
DEADILGDRIAILAEGQLQCCGSPLFLKSKYGAGYHMVMVKEPHCQVEDITDLITSYVPN
ATLESNAGAELSYILPKESTHRFEPLFSELELRREELGIASYGASVTTMEEVFLRVGKLV
DTSLDIQAIQLPPLQYQHERRANDWGAEESCSMSDCTEDSGTLITEDCSNIKLNGKCTLW
CQQFYALFVKRAAYSWRNWKMVVGQFLVPLVFTSLALVVGKTFPGPQDSPPLDLSLAPYG
HTMVPYSLPPNASALLQSLADNFRDQFSGQQTEPLEVLDNLDNYLLTKASEEGALFAEHC
LCAADIQNHGSRVKVTARFNNQAFHAVASALVLVDNALFKLIAGPEASISVTNYPQPRNT
TETAQDQLIEGQAGFAIAINLLYGMASLASTFSLLLVGERAVKSKHVQFVSGASALSYWL
SALTWDLLNFMIPCIFMLAVFQAFDVRAYTEEHHLVDVMLMLLLYGWAVIPLMYLFSFLF
TSTATAYTRLTIFNILSGTATFLSVTIMSIPALELVDLSHILDGVFLVLPNYCLGRSFSD
FYQNYHLLKFCRSSPLSVFICQEFNITYQDNYFSWSSPGVGRYLTSMAVQGLAFLYLLFV
IESQIFCSLYNLCRTYKEHRWASLPESPVSPPEDRDVADERKKILESPLEQLSALSSPLV
IRELSKVYGRRALVLAVDHISLAVGRGECFGLLGFNGAGKTTTFRMLTGDETVSSGDAYI
DGYSILRSIKKVQQRIGYCPQFDPLLDHMTGRETLCMYARLRGVPEGYINSCVENMLRGL
LLEAHANKLVRTYSGGNKRKLSAGIALIGGPSVIFMDEPSTGMDPVARRLLWDAVTRTRE
SGKAVVITSHSMEECEALCTRLAIMVNGQLKCLGSPQHLKNKFGSGYTLLAKTARGAEEL
MAFKDFIETVFPGSVLKHEHQGMVHYHITSQELSWAQVFGTLEKAKEKFDLEDYCVSQIS
LEQVFLSFSHFQQSPVGGVV
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtttagacaactggggcttcttctatggaagaattacatcctgcagaagcga
caaatcctcgtgactgtgattgagctggccttgccccttctgttttctgccatcttaatt
gcacttcggcacagagtccagtctgttacgtaccccaatgccaccctgtacaaagacgtg
tctttcccatacctaccgtttatcccaggcccaagaccttgggagctggcgtttgtgcct
tctcatagcaaagctgcccaggaaattgtcacagaggtagggcagagcctttccctctat
agtgttgctcggggatttcccacagaagaggattttgaagactacatccggcacaataac
cattcaagcaaaatcctggcagccgtggtctttgaacatcattttaacgacagtgaggac
cccttgccgctgcaggtccgttacaggctgcggttcaaatacagcccacgaaatgccccc
atgagcgaacggacggggctgaaccccaatgtggacagaaactggcacacccgatatcta
tacccgcttttccagatgcctgggccacgtgaggcaggagacaagactggaggcacacca
gggtaccagcgggagggcttcctggccatgcagcatgcagtcgatcgtgccattatgtgg
tatcatgctaacgagagtggccgctcgctattggacagcattgatgtggccatacgtcgc
ttcccctatccgccctatgttaatgacctcttcatcctggctatccagaaccaacttcca
ttgcttctgatgctcagcttcacctacacctcattaagcattgtgcgtgcactggtactg
gagaaggagagaaaattaaaggagtacatgcgggtcatggggctcagtacctggcttcac
tccactgcctggttcatccatttcttcctcctactcttggtgtctgccttctttgtcact
ttgctgctgtgtatccaggtcagcagtgaaggtgcggtcctaaccaggagtgacccctca
ttagtgtttgtctatatcttgtcgttctcagtctccaccatcagctttagcttcatgatc
agcagtttcttctctagagcaaacatggcagccgcagcaggaggctttctgtatttcctt
tcctacattccatattttttcatctccccatggtatgatgagttgaatcatggtgcaaaa
gtgtcatcgtgtcttctctctaatgtgggcatggcaatgggggctcaactcatcgggatg
tttgaaggcaaaggtacaggagctcagtggtccaatctctttacgccagtcagtgtggat
gataatttcacattgggtcaggtcttacagatgctgctgttggattctgttttctatttc
ctggttgggtggtacgtggagtctatcatgcctggagattatggcgtaccccagccttgg
tacttctgcttcttgccttcctactggtgtggaaaaccgcggctagtggagggtctagaa
aaggaggatgacgaggatccagaaaaggcgctgaaaggagaatatttagaggaagagcct
tccgatttggtaccaggaatacgcatcaagcacttgactaaggtgtaccgtgtgagcggt
aagaagcggatagctgtgcgagatgtcactcttaatatgtatgaagggcaagtcacagtg
ttattgggacacaatggtgcaggaaagagcaccacgctttccatgttgacaggactctgt
cccccttcatcaggtgaatgctatattggaggctatgagatttcccgagacacagctctg
atccgtcgcagcctgggattgtgcccccaacatgatgtcctgttccaaggtcttactgtt
gaggagcacctctatttttatgcagggttaaagggatgtccacgctggagctgcttagaa
gaggtggagaagattctccaaatcctgcgcctggaggagaagcgcaatgcacttagtact
cagctctctggggggacgtgtcgtaaactgtccattggcattgctctaattggaggatcc
aaggttgtgatgttggacgagcccacctcgggaatggacccagcttcccgcagggacacg
tgggagctcttgcggcagcacaaacacgatcgcactctgctgctcaccacccacttcatg
gatgaggcagatattttaggagaccggattgccatattggctgagggccagctccagtgc
tgtgggtccccactattcttgaaaagcaaatatggtgccgggtaccacatggtcatggtg
aaggagccgcactgccaggtggaagacattaccgatcttattaccagctatgtgcccaat
gccaccctggagagcaatgctggagcagaactgtcctacattcttcccaaggagagtacc
cataggtttgaacctctcttctcggagctggaactccgtcgtgaagaactggggatagcc
agctatggggcttctgttaccacgatggaagaagtattcctacgtgttgggaagcttgta
gacaccagcttggacattcaggctatccaactgcctcctcttcagtaccagcatgagaga
cgcgcaaatgactggggagccgaagaatcctgttctatgagtgactgcacagaggacagc
gggaccctcatcactgaggattgctctaacatcaagcttaatgggaagtgcacactttgg
tgccagcagttttatgccctgtttgtgaagagagctgcttatagttggcgaaactggaag
atggtggtgggtcaatttctggttccacttgtcttcacttcgttagcattagttgtgggc
aagacgttccctggtccccaggactcgccaccattggacctaagccttgcgccctatggg
catacaatggtgccatattctcttcctcctaatgcctctgccttgcttcagagcctggct
gataacttcagagatcagttttctggacagcagacagagccgttggaggtgctagacaat
ctcgacaactacctgctgactaaagcttcagaagaaggagcactgtttgcagaacattgt
ctttgtgctgccgacatccagaaccatggctctagggttaaggtgacggctcgcttcaat
aaccaggctttccatgcagtcgcttcggcgcttgtcctggtcgataatgctctcttcaag
ttgatcgctgggccagaggcttccatttctgtaaccaactatcctcaaccacgaaacacc
acagagactgcccaagatcagctaatagagggacaggctggctttgccatagccattaac
ctgctatatgggatggcatctcttgcgagtacgttctctcttttgttggttggagagaga
gcagtgaagtccaagcacgtccagtttgtcagtggagcctcagctctaagctattggctg
tcagcgctgacctgggacttgctcaactttatgattccttgcatcttcatgctggcagtg
ttccaggcatttgatgtgcgcgcttacacggaagagcatcaccttgtggatgtgatgctg
atgttgctcctgtatggctgggccgtgatccccctaatgtatttattcagttttctgttc
acctcaactgccactgcctacaccaggctcaccatcttcaacatcttgtctggcactgcc
accttcctctctgttaccatcatgagcattccagcccttgagctggtggatctgtctcac
atccttgatggggtcttcctggtactgccaaattattgcttgggacgatcgttcagcgac
ttctaccagaattatcacttattaaagttctgccgttcatctcccctttctgttttcatc
tgtcaagaattcaatatcacctatcaggacaactacttctcgtggtcttcaccaggggtg
ggccggtatttgacctcgatggctgttcagggcttagctttcctctaccttctctttgta
atcgaaagccagatattctgcagtttgtacaatctgtgccggacctacaaagaacaccgc
tgggcttcactgccagagtcccctgtttctcccccagaggatcgagatgtggcagatgag
agaaaaaaaattctggaatcacccttggagcagctgtcagcacttagcagccctctagtc
atccgtgagcttagcaaggtgtacgggcgccgtgccttggtcctagcagtagaccatata
tcattagcagttggacgaggcgagtgttttggtctactggggttcaatggagctggcaag
actaccacattccgcatgctaacgggagatgaaactgtcagctctggagacgcttacatt
gatgggtacagcatcctacgcagcatcaagaaggttcagcagcgaatcgggtactgccca
cagtttgaccctctgctggaccacatgacggggcgtgagacactctgcatgtatgctcgt
ttgcggggggtgcctgagggatacattaacagctgcgtggagaacatgttgcgtggattg
ctcctcgaagcccatgccaacaagctggttcggacttacagcggaggaaataagaggaaa
ctaagtgctggtatcgctctgattggagggccatccgtgatcttcatggacgagccatct
actggaatggatccagttgcacgtagactgttgtgggatgcagtgacaagaacacgggag
agtggaaaggctgtggtcattacatctcacagcatggaggaatgcgaagctctatgcaca
cgtctcgccatcatggtgaatggacaactaaagtgcctcggaagtccccagcacctaaag
aacaaatttgggagtggctacacgttgctggcaaagaccgccagaggggcagaggaactg
atggcttttaaggatttcattgaaacagttttcccaggcagtgtgctgaagcacgagcac
cagggtatggtgcattaccatataaccagccaagagttgagttgggcacaggtgtttggg
actttagaaaaggccaaggagaagtttgatctggaggattattgtgtcagtcagatctca
ctggaacaagtctttctgagcttcagtcacttccagcagtcgccagtgggtggcgtagta
taa
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