KEGG   Xenopus laevis (African clawed frog): 108695270
Entry
108695270         CDS       T01010                                 
Symbol
ss18.S
Name
(RefSeq) protein SSXT isoform X1
  KO
K15623  protein SSXT
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108695270 (ss18.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xla03036]
    108695270 (ss18.S)
Chromosome and associated proteins [BR:xla03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    108695270 (ss18.S)
   GBAF(ncBAF) complex
    108695270 (ss18.S)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 108695270
NCBI-ProteinID: XP_018079163
Xenbase: XB-GENE-17341511
UniProt: A0A1L8FSV5
LinkDB
Position
6S:complement(95946584..95966272)
AA seq 424 aa
MSVAFAAPRQRGKGDITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNTQPLLSALPTQNMPMGPAGMNQSGPPQPPRSHNMPSEGMVGGGPSAPHMQ
NQMNGQMPGPNHMPMQGPAPGQHNMPNSSMNMPSNNHGSMGGYNHSVPSSQNMPAQNQMT
MNQGQSIGNYAPRPNMNMQPNQGPMMHQQPPSQQYNLPQGGQHYQGQQPPMSMMGQVNQG
NHMIGQRQIPPYRPPQQAPPQQYSGQEEYYGEQYSHGAQGPPEGMNQQYYPDGHNDYGYQ
QPSYPEQGYDRPYEDSSHYYEGGNAQYSQPQESYQAPPQQQQQQQQQQQGYPPQQQQYAG
QQAYAGQQQGYAPSQSAPGPQYPNYPQGQSQQYVPYRPTQPGPPQPQQQRPYGYDQAQYG
NYQQ
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgtctgtagctttcgcggctcccaggcagcgggggaagggggacatcactcctgcagcc
attcaaaagatgctggatgaaaacaaccatttaatacaatgcataatggattatcagaac
aaaggaaaaacctcagaatgttcgcaatatcaacagatgctgcataccaatttagtatac
ttggccacaattgcagactcaaaccaaaatacccagcctttattgtcagcactacccaca
caaaatatgcctatgggtccagcagggatgaatcagagcggccctccacaaccaccgcgc
tctcacaacatgccttcagaagggatggtaggagggggtccgtctgcaccgcacatgcag
aaccagatgaacggccagatgcctggaccaaaccatatgcctatgcaaggtccagcacct
ggacaacataatatgccaaacagttccatgaacatgccttcgaataaccatggttccatg
ggaggctataatcattctgtgccatcctcacaaaatatgccagcccagaatcagatgacc
atgaaccaaggccaatccattggcaattatgctcctcgaccgaatatgaacatgcaacca
aatcaaggtcctatgatgcaccaacagcctccttcacagcaatataatctgcctcaggga
ggacagcattatcagggacaacagccaccaatgagcatgatgggccaagttaaccaaggg
aatcatatgattgggcaaaggcaaattccaccatacagaccccctcagcaagctccaccc
caacaatactctggtcaggaagagtattatggagaacaatatagccatggtgctcaagga
cccccagaaggcatgaatcagcaatactaccctgatggtcataatgattacggttatcag
caaccgtcgtatcctgaacaaggctacgataggccttacgaggattcctcacattactac
gaaggaggaaatgcacaatacagtcaaccgcaagaatcctatcaagcaccaccacaacaa
caacaacaacaacagcagcagcagcaaggctatccacctcagcaacagcagtatgctggt
cagcaagcttatgctggtcagcagcaaggttacgcaccttcacagagtgctcctggacct
cagtaccccaactacccacaaggacaaagccaacagtatgtgccatacaggcctacacag
ccaggccctccccagccccaacagcagaggccatatggatatgatcaggctcaatatgga
aactaccaacaatga

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