KEGG   Xenopus laevis (African clawed frog): 108695278
Entry
108695278         CDS       T01010                                 
Symbol
rnf125.S
Name
(RefSeq) E3 ubiquitin-protein ligase RNF125 isoform X1
  KO
K12170  E3 ubiquitin-protein ligase RNF125 [EC:2.3.2.27]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    108695278 (rnf125.S)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xla04121]
    108695278 (rnf125.S)
Enzymes [BR:xla01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108695278 (rnf125.S)
Ubiquitin system [BR:xla04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108695278 (rnf125.S)
SSDB
Motif
Pfam: zf_C2HC_14 zf-Di19 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_5 zf-C3HC4_3 TRAF3_RING Prok-RING_4 U-box zf-Nse zf-RING_10 zf-rbx1 zf-UDP Sina_RING DUF7501 zf-RING_4
Other DBs
NCBI-GeneID: 108695278
NCBI-ProteinID: XP_018079175
Xenbase: XB-GENE-6487831
UniProt: A0A974CKG5 A0A1L8FT09
LinkDB
Position
6S:97513063..97531213
AA seq 224 aa
MGSILSSEANREAKSRSLSEQDPNFDCAVCLEVLNRPMRTRCGHVFCQTCIKASLRNNTY
TCPYCRTHLSSEGTLAVDIMKKMKTVFQNCEECEEKVCLSDMRAHLNMCEQYITKYGRLE
ELGRTTCREEMFACPFCQLEFDEDGLVQHCFTYHSTENRLVVCPICRLMPGGDSSYTMSF
LKHLHARHSIYYENYIDINIVEEALIERVLDLSLIHYMRHTNRS
NT seq 675 nt   +upstreamnt  +downstreamnt
atgggctccatcctcagcagcgaagccaacagagaagccaagtcacggtctctgagcgaa
caagaccccaacttcgactgcgccgtgtgcctggaagtgctgaaccgaccgatgaggacg
cgctgtgggcatgtgttttgccaaacttgcattaaagctagcctccggaataatacgtac
acctgcccttactgccgcactcacctgtcatcagaaggaaccctggctgtggatataatg
aagaagatgaaaacagtatttcagaattgtgaagaatgtgaggagaaggtgtgcctgagt
gatatgagggctcatttaaacatgtgcgagcaatacataacaaaatatggtcgccttgag
gaacttggaagaactacttgcagagaagaaatgtttgcatgcccgttttgtcagctggaa
ttcgacgaagatggccttgtgcaacattgctttacctaccacagcacagaaaacagactg
gtggtgtgtccaatttgtcgcctgatgcctggaggagactcaagttatacaatgagcttt
ttgaagcatcttcatgcgagacactccatatactatgagaattacatagatatcaacatt
gtggaagaagcacttattgaaagagttcttgacctttcactgatacattacatgaggcat
acaaacagatcctga

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