Xenopus laevis (African clawed frog): 108695291
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Entry
108695291 CDS
T01010
Symbol
rb1cc1.S
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108695291 (rb1cc1.S)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xla01009
]
108695291 (rb1cc1.S)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xla04131
]
108695291 (rb1cc1.S)
03029 Mitochondrial biogenesis [BR:
xla03029
]
108695291 (rb1cc1.S)
Protein phosphatases and associated proteins [BR:
xla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108695291 (rb1cc1.S)
Membrane trafficking [BR:
xla04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108695291 (rb1cc1.S)
Mitochondrial biogenesis [BR:
xla03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108695291 (rb1cc1.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
108695291
NCBI-ProteinID:
XP_018079190
Xenbase:
XB-GENE-17341643
UniProt:
A0A1L8FT26
A0A974CJU3
LinkDB
All DBs
Position
6S:complement(99966829..100023477)
Genome browser
AA seq
1573 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQTVTDLKHAIQTKYKIAVHNQILVVNGGECMASDRRVC
SYSAGTDTNPIFLFNKEMILCERPPVIPRTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTHSYQKLLFKFENAYTKYLQ
SIDDIKLKLTNLGTAVSVMAKIPLLECLTRHSYRMCLDRLISSTDVDTEEIENAKVEEMV
QYDGEAKPKNVPLLASLSKSLEQQLREVTGKDTGQENNESSTQNMELSDENYSGNPPSFN
VSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRSIQPFLAECRQTVAKLDNQNMKAIKGL
EDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQLMIMLT
NHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLLALFRLLTELVERIKI
VEALGTVPQMYCLAVVEVVRRKMFIKHYREWTNSLVKDGKSLYETEKMKRESFGKLFRKS
YLRNRLFRGLDSWPPSFCTRKPRRYDGELPDISVNDLWFLQSLCPPEVQLFLRVPLLCDF
EPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNGHLSPQCLTTQRIDSTTETTTS
SKTPLSLSLQGPICPAVNAPGPLEELSPDSIDAHTFDFETIPHPSTEQSLKQGSLDMDSL
ADSPESDFMSAVNEFVIEENPISPNISDTQSPEMMVESLYSSVINAIDSRRMQDTKSKVK
DENTSSKFCLEKYKIVAHESQTSLRNFKEDLSYLKMLVQREQKNFASAIKSVSVDIYDTG
DKVKLSVETALKEKHLEELQVLERSYQKRLQLSKEQFDENDKQLKSDLAKLKEHLQNRDN
EFALIRNENETFQCLQSEQNEKILSLENAMKEQACEIQQLRQSREAALEDIRKLHAENEE
KLRFLKEELLILEQTHLKELEENVKLRHAQEMESLISDNKCSQERVKQDHKLKVDQLLES
HSAAIHEKDSQLQEKGLRVSELSDNRCKLEVELALKEAEIDEIKLLLDECKAQQQDVMKC
QINEKTETLEKEILRLNSLIRVHNDEHEQGLVELEALLSAEKNLCISELLNRHETEVTLL
QAEISRLTIAHKQALETECGLCEQVNALRSKLAENVNALEKQTELQEKALNEQKVKYETA
FQKLEEEQEQILLAQKQEKELLLQTFTQEKEEAVKKLKAVEEELLVKVCQLEHKVNQSST
EFAVPENAHNLASKLQEQLEKEKQSFTEQLEHQERKMSEDMQSLRISLIAEQQTNFNTVL
TRERVKKENIISEISEKLKMVTQQQERDKDLIETLSEDRARLLEEKKKLEEEVARLHNVA
TLAQVTVASEPSGATAPDFPPEFDRPNFDATVLEEDKLEPSMETSMMAVHDLTLSEEKQK
IIQLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNY
VLFTVSPTLYFLHSESLSSLDLKPASGSSRKPWVLGKVMEKEYCQAKKAQNRFKVPLGTK
FYRVKAVPWNKKV
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgttttcctggtgaacactggaacaaccctgacttttgacaccgagcta
gcagtgcagactgtgacagatcttaagcatgctatccaaacaaagtacaaaattgccgtt
cataatcagatacttgttgtcaatggaggggaatgtatggcatctgacagaagggtttgt
agctacagcgccggtactgacacaaatccaatctttctattcaataaagaaatgatactc
tgcgagcgcccgccagtgattcccaggacaacattttcagcagagaatgaaatggagtta
aaagttgaagaatcacttatgatgcctgcggtatttcacacagtcgcctctagaacacaa
cttgcagtggaaatgtacgaagtcgccaaaaagctttgctctttttgtgaaggtctggtc
catgatgaacatctacagcatcaaggatgggcagccattatggcaaacttagaagactgt
acacattcgtaccaaaagctgctttttaaatttgaaaatgcatatacaaagtatcttcag
tccatagatgatattaaactaaaattaacaaatttaggaacagcggtttctgtcatggcc
aagattccactgcttgagtgcctaacaagacatagctataggatgtgtttagatagactt
atatcatctactgatgttgataccgaagaaattgagaatgcaaaagtagaagaaatggtg
caatatgatggagaagcaaaaccgaaaaatgtgccgttgctagcctcactttctaagtct
ttggaacagcagctacgggaagtaacaggaaaggacactgggcaagagaacaacgagtct
tctactcaaaacatggaactctcagatgaaaattattctggaaatcccccttcctttaac
gtttcattattagactggataaatgtccaagatcggccaaatgatgttgagtcattggtt
agaaaatgttttgattcaatgagcagactcgacccacgaagtattcagccatttctggca
gaatgtcgtcaaactgttgccaaattggataatcaaaatatgaaagccatcaaggggctt
gaagataggctgtatgctctggatcaaatgattgctagctgcagcagactggtcaatgaa
caaaaagaacttgctcagggatttttagcgaatcaaaagcgggctgaaaacttgaaagac
acctctgtgttacctgatttgtgcttaagtcatgcaaatcaactgatgatcatgctgaca
aaccacagaaaactgttggatatcaaacagaaatgtactactgccaaacaggagcttgct
aataatttgcaagttcgtttaaagtggtgctgttttgtaatgctccatgctgaccaagat
ggtgaaaaactactggctctattccgactcttaacagagctcgtagaacgaataaagatt
gtggaggctcttggtactgttcctcaaatgtactgcttagcggtggttgaagtggtgaga
aggaaaatgttcataaaacactacagagagtggacaaattcattagtgaaagatggaaaa
tctctctatgaaacagagaaaatgaaaagggaatcctttggaaagctttttaggaaatca
tatttacgaaacaggctctttagaggacttgactcatggccaccatcattctgtacacga
aagccaaggagatatgacggtgagcttcctgatatctctgttaatgacctttggtttttg
cagtctctttgtccaccagaagttcagctttttctcagggttcccttgctttgtgatttt
gagcctctacatcagcatgtgcgtgcactacacaacttagtaaaagcagcacaaagtttg
gatgagatgtctcagaccatcactgatctgttaaatgaacaaaaggcatctaatggtcat
ctgtccccacaatgtctaactacgcaaaggatagacagtacaacagaaactactacctca
tccaaaactcctttatcacttagtcttcagggtcccatttgtcctgctgttaatgctccc
gggcctttggaagagttgtctccagacagcattgatgctcatacgtttgattttgaaacg
attccccatcctagcactgaacaatcacttaaacagggttctttggacatggactctttg
gcagatagtcctgaatctgattttatgtctgcagtaaatgagtttgttattgaagagaat
cccatttcaccaaatataagtgatacacaaagtccagaaatgatggttgagtccctatat
tcatctgttattaatgcaattgacagtagacgaatgcaagacacgaaaagcaaagtaaaa
gatgaaaacacatcttcaaaattttgtttggaaaaatataaaattgttgcacatgaatct
caaaccagtttgcggaattttaaggaggatctttcttacttaaaaatgcttgtgcaaaga
gagcaaaaaaattttgctagtgctataaaatcagtttcagtagatatttatgatacaggt
gataaagtaaaattgtctgttgaaacagcattaaaggaaaagcatttagaagaacttcag
gttttggaacgatcttatcagaaaagactgcagctttcaaaggaacaatttgatgaaaat
gataaacaactgaaaagtgaccttgcaaaactaaaagaacatttgcaaaacagagataat
gaatttgcattgatcagaaatgaaaatgaaacttttcaatgtttacagagtgagcaaaat
gagaaaatcctaagtctagaaaatgcaatgaaggaacaagcatgtgaaattcaacaactg
agacaatctcgggaagctgctttagaagatataagaaaacttcatgctgaaaatgaagaa
aagctcaggtttctaaaggaagaacttctgattttagaacaaactcatttaaaagagctt
gaagaaaatgtaaaactcaggcacgcacaagagatggaaagtttgatatctgacaacaag
tgttctcaagaaagagtcaagcaagatcataaactaaaggttgaccagttgctcgaatct
catagtgcagcaattcatgaaaaagacagtcagctgcaagaaaaaggccttagagtttct
gagctttctgacaatagatgtaaattagaagttgaactggcactaaaagaagcagaaatc
gatgaaataaaattattactggacgaatgcaaagcacaacagcaggatgtcatgaaatgt
caaattaatgagaaaaccgaaaccttagaaaaggagatattgaggttgaatagcctaatt
cgggtgcataatgatgaacatgaacagggactagtggagcttgaagcattgttgtcagct
gaaaaaaatctgtgcatttcagaacttttgaataggcatgaaacagaggtcactctttta
caggctgaaatcagtcggctgacaattgcacataagcaagcattagaaacagagtgtgga
ctatgtgaacaggttaatgcattaagaagtaaattagctgaaaatgtaaatgcacttgaa
aaacaaactgaacttcaagaaaaggctttaaatgagcagaaagtaaaatatgagactgct
tttcagaaacttgaagaagagcaagaacaaattttgcttgcacaaaaacaagaaaaggag
ctgctcctccaaacatttacacaggagaaagaggaggctgttaaaaaattaaaggctgtt
gaagaagaactgttagtaaaagtatgtcaacttgaacacaaagtaaaccagagctctact
gaatttgcagtgccagaaaatgcccataacttggcctctaaacttcaagaacagcttgaa
aaagagaaacagtccttcacagagcagcttgaacaccaagaaaggaaaatgagtgaagac
atgcaaagtcttaggatttcactgattgcagaacaacagacaaactttaacacagttttg
acaagagagcgagtgaagaaagaaaacattataagtgaaatcagtgagaaattaaagatg
gttacccaacagcaggagagagataaagatctaattgaaacactgtctgaagaccgagct
cgtttgcttgaagaaaagaaaaaacttgaggaagaagttgccaggctacacaatgttgcc
actttagctcaggtgactgtggcttctgaacctagtggagccactgcacctgactttcct
cctgaattcgatagaccaaattttgatgccacagtccttgaggaagataaattggaaccc
agtatggaaaccagcatgatggctgttcatgatcttacattgtcagaagaaaagcaaaag
ataatacagcttgaaagaactttgcaactgaaagaagaagagaataaacgtttgaatcaa
agattgatgtctcaaagcatgtcttcagtatcttcaagacattcagaaaaaattgctatt
cgagacttccaggttggagacttggtacttattatcttggatgaacgtcatgataattat
gtgttgttcaccgtcagcccaactttgtacttcttgcattctgaatctctttcttcacta
gatcttaaaccagcgtctggctcatcaagaaaaccctgggttttgggcaaagtaatggag
aaggagtattgtcaggcaaaaaaggcgcaaaacagatttaaagtacctctgggcactaag
ttttaccgggtcaaagcagtgccatggaacaaaaaagtataa
DBGET
integrated database retrieval system
